Homology
BLAST of Lag0028603 vs. NCBI nr
Match:
XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])
HSP 1 Score: 415.6 bits (1067), Expect = 7.8e-112
Identity = 271/657 (41.25%), Postives = 346/657 (52.66%), Query Frame = 0
Query: 10 PYSASTGTFSSPPLNQLLNQITSIKLDRGNFLLWKNLTMPILRSYKLEGHLLATSSCPPE 69
P S F+SPPLNQLLNQITSIK+DRGNFLLW+NL +PILRSYKL +L CPP
Sbjct: 14 PAVVSGAVFTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPPT 73
Query: 70 FL-QIEEPTNSSATTEVTAGASNLETVVSGASSSESRRTVNPQYEAWVAVDQLLLGWLYN 129
L + PTN + G++SS+S T+NP YEAW+ VD+LLLGWLYN
Sbjct: 74 HLVPTDTPTN-----------------IEGSTSSQSSPTLNPTYEAWIVVDKLLLGWLYN 133
Query: 130 SMTPEVATQVMGVDNAKEQWEAIEELFGVQSRAKEDFLRQTFQQTRKGNMKMSDYLRTMK 189
SM +VA QVMG ++E W A++ELFGVQSRA+ D+L+Q FQQT KG+++M +YL+ MK
Sbjct: 134 SMAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMK 193
Query: 190 NHADNLGFSGSPISNRNLFSQVLLGLDEEYNVVVAIVQGRASVFWFELQAELLVFEKRLE 249
+HADNL +GS +S R+L SQVL GLDEEYN +V VQG+ ++ W E+ AELL +EKRLE
Sbjct: 194 SHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLE 253
Query: 250 LQNSEKSAVNFGQNSTANMVVSKGGNSPKQQNHNNMTGRMGFNNNQRGNGNRYRGRGRGY 309
QNS KS + Q T ++ G + Q NN NN G+ RG GY
Sbjct: 254 YQNSLKSGIPINQTQTPSVNYVDGRSFQTNQRTNN-------GNNSHGSNTH---RGGGY 313
Query: 310 NNYNNRTTCQVCGKVGHSAMVCYHRFDKEFSPVHKRGNGNGNYPPSRGNGQQLQQQSNVF 369
G G +R G G P N NVF
Sbjct: 314 QR----------GSFG------------------QRNRGRGPQPTQHKNFTPSNSGPNVF 373
Query: 370 M---TAQQTATPETIADPNWYADSGTSNHVTKNYENITNPTDYGGNEFVTIGNGAKLPIT 429
T+ TPET+ DP+WYADSG ++HVT N N+ DY G E V + NG KL I+
Sbjct: 374 AAHHTSTTVTTPETVIDPSWYADSGATSHVTANPNNVEQKVDYSGTENVIVANGNKLSIS 433
Query: 430 CVGSSSLSNGYHVLHLENVLCVPEIAKNLVSMSKLAEDNDVFIELHGNFCLVMDKSTRRV 489
+GS+++ L L++VL VP+IAKNL DK++ R
Sbjct: 434 HIGSTNIHASGGSLKLKDVLRVPDIAKNL------------------------DKASGRT 493
Query: 490 VLKGTLKDGLYQL---HGAQPSTS------HGHSSTLQSNKNLESVFVVSN--VMPSVNV 549
+LKGTLKD LY+L H + P+T H+ SN L S + +NV
Sbjct: 494 LLKGTLKDNLYRLDRSHRSPPATPTLTAPLFAHTVVSLSNNTLSSEKPTPSFPFAEHINV 541
Query: 550 VVSKQVWHRCLGHPAAKMLDLYSIPILCVVLDDFSRFVWLYPLKLKSDTQAAFSHFLNVV 609
VVS VWH+ LGHP+ ++L L
Sbjct: 554 VVSTTVWHKRLGHPSIQVLTL--------------------------------------- 541
Query: 610 KTQFGSMIKAVQSDNGGEFVKVHKLCSQLGIESRHSCPYTSAQNGRAERKNRHVVET 652
QSD GGE+ +H LC LGI+ R S PYTSAQNGRAERK+RH+VET
Sbjct: 614 -----------QSDGGGEYQPIHSLCRNLGIQIRVSYPYTSAQNGRAERKHRHIVET 541
BLAST of Lag0028603 vs. NCBI nr
Match:
GAU19483.1 (hypothetical protein TSUD_77270 [Trifolium subterraneum])
HSP 1 Score: 390.6 bits (1002), Expect = 2.7e-104
Identity = 254/655 (38.78%), Postives = 348/655 (53.13%), Query Frame = 0
Query: 32 SIKLDRGNFLLWKNLTMPILRSYKLEGHLLATSSCPPEFLQIEEPTNSSATTEVTAGASN 91
S+KLDR N+ LWK+L +P++R KL+G++L T CP EF+
Sbjct: 18 SVKLDRNNYPLWKSLVLPVIRGCKLDGYMLGTEGCPEEFI-------------------- 77
Query: 92 LETVVSGASSSESRRTVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVMGVDNAKEQWEAI 151
+SS+S + N + W A DQ LLGW+ NSMT E+ATQ++ + +K+ W+
Sbjct: 78 --------TSSDSSKNKNSAFVEWQANDQRLLGWMLNSMTTEIATQLLHCETSKQLWDEA 137
Query: 152 EELFGVQSRAKEDFLRQTFQQTRKGNMKMSDYLRTMKNHADNLGFSGSPISNRNLFSQVL 211
+ L G +R++ +L+ F RKG MKM DYL MKN D L +G+P+S +L Q L
Sbjct: 138 QSLAGAHTRSQIIYLKSEFHSIRKGEMKMEDYLIKMKNLVDKLKLAGNPVSTSDLIIQTL 197
Query: 212 LGLDEEYNVVVAIVQGRASVFWFELQAELLVFEKRLELQNSEKSAVNFGQNSTANMVVSK 271
GLD EYN VV + + ++ W +LQA+LL FE R+E N + N N+TAN+
Sbjct: 198 NGLDSEYNPVVVKLSDQTTLSWVDLQAQLLTFESRIEQLN---NLTNLTLNATANVA--- 257
Query: 272 GGNSPKQQNHNNMTGRMGFNNNQRGNGNR--YRGRGRGYNNYNNRTTCQVCGKVGHSAMV 331
N ++ G+ NNN RG+ +R GRGRG + N CQVCG H A+
Sbjct: 258 --------NRSDHRGKSS-NNNWRGSNSRGWRGGRGRGKSGKN---PCQVCGLSNHIAID 317
Query: 332 CYHRFDKEFSPVHKRGNGNGNYPPSRGNGQQLQQQSNVFMTAQQTATPETIADPNWYADS 391
C+HRFDK +S R N + G Q N F+ +Q ++ D +WY DS
Sbjct: 318 CFHRFDKTYS----RSNHSA--------GHDKQGSHNAFLASQ-----NSVEDYDWYFDS 377
Query: 392 GTSNHVTKNYENITNPTDYGGNEFVTIGNGAKLPITCVGSSSLSNGYHVLHLENVLCVPE 451
G SNHVT E + T++ G + +GNG KL I GSS L + L+L ++L VP
Sbjct: 378 GASNHVTHQTEKFQDLTEHHGKNSLVVGNGEKLAILATGSSKLKS----LNLHDILYVPN 437
Query: 452 IAKNLVSMSKLAEDNDVFIELHGNFCLVMDKSTRRVVLKGTLKDGLYQLHGAQPSTSH-- 511
I KNL+S+SKLA DN++ +E N C V DK T +V+LKG LKDGLYQL G + + S
Sbjct: 438 ITKNLLSVSKLAADNNILVEFDENCCFVKDKLTGKVILKGLLKDGLYQLSGTKRNPSAFV 497
Query: 512 ----------GHSSTLQSNKNLESVFVVSNVMPSVNVVVSKQVWH--------RCLGHPA 571
GH + +K LES V V PS N + + + A
Sbjct: 498 SVKESWHRRLGHPNNKVLDKVLESCKV--KVPPSDNFSFCEACQYGKMHLLPFKSSSSHA 557
Query: 572 AKMLDLY------SIPILCV--------VLDDFSRFVWLYPLKLKSDTQAAFSHFLNVVK 631
+ L+L PI+ +DDFSRF W+YPLK KS+T AF F N+ +
Sbjct: 558 QEPLELVHTDVWGPAPIMTSSGFKYYVHFVDDFSRFTWIYPLKQKSETVQAFIQFKNLTE 603
Query: 632 TQFGSMIKAVQSDNGGEFVKVHKLCSQLGIESRHSCPYTSAQNGRAERKNRHVVE 651
QF IK +Q D GGE+ V KL + GI+ R SCPYTS QNGRAERK+RH+ E
Sbjct: 618 NQFNKRIKVIQCDGGGEYKPVQKLAVEAGIQFRMSCPYTSQQNGRAERKHRHITE 603
BLAST of Lag0028603 vs. NCBI nr
Match:
PNX76291.1 (gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense])
HSP 1 Score: 387.9 bits (995), Expect = 1.7e-103
Identity = 252/659 (38.24%), Postives = 349/659 (52.96%), Query Frame = 0
Query: 27 LNQITSIKLDRGNFLLWKNLTMPILRSYKLEGHLLATSSCPPEFLQIEEPTNSSATTEVT 86
L S+KLDR N+ LW+++ +PI+R +L+G++L CP EF+
Sbjct: 13 LPSTVSVKLDRDNYPLWQSMVLPIIRGARLDGYMLGKKKCPEEFI--------------- 72
Query: 87 AGASNLETVVSGASSSESRRTVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVMGVDNAKE 146
++++S + NP++E W A DQ LLGWL NSMT +ATQ++ + + +
Sbjct: 73 -------------TAADSSKKFNPEFEDWQAYDQQLLGWLRNSMTVGIATQLLHCETSMQ 132
Query: 147 QWEAIEELFGVQSRAKEDFLRQTFQQTRKGNMKMSDYLRTMKNHADNLGFSGSPISNRNL 206
W+ + L G +R++ +L+ F TRKG MKM DYL MKN AD L +G+PIS +L
Sbjct: 133 LWDEAQSLAGAHTRSQITYLKSEFHSTRKGEMKMEDYLIKMKNLADKLKLAGNPISTSDL 192
Query: 207 FSQVLLGLDEEYNVVVAIVQGRASVFWFELQAELLVFEKRLELQNSEKSAVNFGQNSTAN 266
Q L GLD EYN VV + + ++ W +LQA+LL FE R+E N S N N+TAN
Sbjct: 193 IIQTLNGLDSEYNPVVVKLSDQTTLSWVDLQAQLLTFENRIEQLN---SLTNLTLNATAN 252
Query: 267 MVVSKGGNSPKQQNHNNMTGRMGFNNNQRGNGNR----YRGRGRGYNNYNNRTTCQVCGK 326
V K + + N NN G NNN RG+ R RGRGR + +TTCQVCG
Sbjct: 253 -VAKKSDHRGNRFNSNN--NWRGSNNNWRGSNFRGWRGGRGRGRSF-----KTTCQVCGL 312
Query: 327 VGHSAMVCYHRFDKEFSPVHKRGNGNGNYPPSRGNGQQLQQQSNVFMTAQQTATPETIAD 386
H A+ C++RFDK +S R N + N Q N F+ +Q +I D
Sbjct: 313 DNHIAIDCFYRFDKTYS----RSNHSAN--------NDKQGSHNAFLASQ-----NSIED 372
Query: 387 PNWYADSGTSNHVTKNYENITNPTDYGGNEFVTIGNGAKLPITCVGSSSLSNGYHVLHLE 446
+WY DSG SNHVT + N +++ G + +GNG KL I GSS L + L+L
Sbjct: 373 YDWYFDSGASNHVTHQTDKFQNLSEHHGKNSLIVGNGEKLEIVATGSSKLKS----LNLH 432
Query: 447 NVLCVPEIAKNLVSMSKLAEDNDVFIELHGNFCLVMDKSTRRVVLKGTLKDGLYQLHGAQ 506
++L VP+I KNL+S+SKLA DN++ +E N C V DK T + +L+G LKDGLYQL
Sbjct: 433 DILYVPKITKNLLSVSKLAADNNILVEFDENCCFVKDKLTGKAILRGILKDGLYQLSEKD 492
Query: 507 PSTSHGHSSTLQSNKNLESVFVVSNVMPSVNVVVSKQ-----------------VWHRCL 566
S + + V+ V+ S NV +S +
Sbjct: 493 SSAYVSIKESWHRKLGHPNNKVLDIVLKSCNVKLSPSDQFSFCEACQYGKMHFLPFKTSF 552
Query: 567 GHPAAKMLDLY------SIPILCV--------VLDDFSRFVWLYPLKLKSDTQAAFSHFL 626
H A ++L+L PI+ +DDF+RF W+YPLK KSDT AF F
Sbjct: 553 SH-AKEILELVHTDVWGPAPIISSSGFKYYVHFIDDFTRFTWIYPLKQKSDTAHAFIQFK 610
Query: 627 NVVKTQFGSMIKAVQSDNGGEFVKVHKLCSQLGIESRHSCPYTSAQNGRAERKNRHVVE 651
N+V+ QF IK +Q D GGE+ V K + GI+ R SCPYTS QNGRAERK+RH+ E
Sbjct: 613 NMVENQFSKKIKTIQCDGGGEYKPVQKHAIEAGIQFRMSCPYTSQQNGRAERKHRHIAE 610
BLAST of Lag0028603 vs. NCBI nr
Match:
XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])
HSP 1 Score: 381.3 bits (978), Expect = 1.6e-101
Identity = 221/490 (45.10%), Postives = 297/490 (60.61%), Query Frame = 0
Query: 1 MENVYFTRIPYSASTGTFSSPPLNQLLNQITSIKLDRGNFLLWKNLTMPILRSYKLEGHL 60
M N T P S S+ FS+PPLNQ+LNQ+T++KLDR N+LLWK L +PIL+ YKLEGHL
Sbjct: 1 MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHL 60
Query: 61 LATSSCPPEFLQIEEPTNSSATTEVTAGASNLETVVSGASSSESRRTVNPQYEAWVAVDQ 120
A + CP F+ +N++ T E GA GASSS + R VNP +E WV D
Sbjct: 61 TAETPCPSHFVLSASSSNTTVTEE---GAD----ATIGASSSITPRIVNPLFEQWVTTDL 120
Query: 121 LLLGWLYNSMTPEVATQVMGVDNAKEQWEAIEELFGVQSRAKEDFLRQTFQQTRKGNMKM 180
LLLGWLYNSMTP+VA Q+MG N ++ W+A ++ FGVQSRA+EDFLRQ Q TRK
Sbjct: 121 LLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK----- 180
Query: 181 SDYLRTMKNHADNLGFSGSPISNRNLFSQVLLGLDEEYNVVVAIVQGRASVFWFELQAEL 240
GLDE YN+V+ ++QG+ + W ++Q++L
Sbjct: 181 --------------------------------GLDEVYNLVIVVIQGKPDISWLDMQSKL 240
Query: 241 LVFEKRLELQNSE-KSAVNFGQNSTANMVVSKGGNSPKQQNHNNMTGRMGFNNNQRGNGN 300
L+FEKRL+ QN++ K+ N Q+ NM N + Q++ G N Q +G
Sbjct: 241 LIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQSNKKFYG----YNRQHFSGQ 300
Query: 301 RYRGRGRGYNNYNNRTTCQVCGKVGHSAMVCYHRFDKEF-SPVHKRGN---GNGNYPPSR 360
R N NN TCQ+CGK GHSA+VCY+RF+KEF SP+ + N NG+ P+
Sbjct: 301 R--------GNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSPNP 360
Query: 361 GNGQQLQQQSNVFMTAQQT---ATPETIADPNWYADSGTSNHVTKNYENITNPTDYGGNE 420
VF++ Q ATP+T+ DPNWY DSG +NHVT+ N+TNPT+Y G E
Sbjct: 361 A----------VFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIE 420
Query: 421 FVTIGNGAKLPITCVGSSSLSNGYHVLHLENVLCVPEIAKNLVSMSKLAEDNDVFIELHG 480
VT+GNG +L I+ VG++ L++G L L+N+LCVP+IAKNL+S+SKLA+DN ++IE HG
Sbjct: 421 KVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVSKLAQDNHIYIEFHG 424
Query: 481 NFCLVMDKST 483
C + DKST
Sbjct: 481 YCCFIKDKST 424
BLAST of Lag0028603 vs. NCBI nr
Match:
PNX78574.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense])
HSP 1 Score: 374.8 bits (961), Expect = 1.5e-99
Identity = 254/687 (36.97%), Postives = 347/687 (50.51%), Query Frame = 0
Query: 24 NQLLNQITSIKLDRGNFLLWKNLTMPILRSYKLEGHLLATSSCPPEFLQIEEPTNSSATT 83
N L ++I S+ LDR NF LWK+L +PI+R +L+G++L T CP +F+
Sbjct: 11 NDLPSRI-SVMLDRENFPLWKSLVLPIIRGCRLDGYILGTKECPEQFI------------ 70
Query: 84 EVTAGASNLETVVSGASSSESRRTVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVMGVDN 143
S+ S + +NP + W A DQ +LGWL N+MT A+Q++ +
Sbjct: 71 ---------------TSAEASGKKINPDFGDWQAEDQRVLGWLLNTMTTGTASQLLHCET 130
Query: 144 AKEQWEAIEELFGVQSRAKEDFLRQTFQQTRKGNMKMSDYLRTMKNHADNLGFSGSPISN 203
+K+ WE + L +R++ +LR F TRKG KM DYL MK+ AD L +GSPI+N
Sbjct: 131 SKQLWEEAQSLASAHTRSRVIYLRSEFHNTRKGEKKMEDYLMKMKDLADKLKMAGSPITN 190
Query: 204 RNLFSQVLLGLDEEYNVVVAIVQGRASVFWFELQAELLVFEKRLELQNSEKSAVNFGQNS 263
+L Q L GLD +YN +V + + ++ W +LQA+LL FE RL+ NS N +N+
Sbjct: 191 VDLIIQTLNGLDSDYNPIVVKLSDQINLSWVDLQAQLLAFESRLDQLNSFN---NLNRNA 250
Query: 264 TANMVVSKGGNSPKQQNHNNMTGRMGFNNNQRGNGNRYRGRGRGYNNYNNRTTCQVCGKV 323
T N V +K NH F N + G RG+GR N+ CQVC K
Sbjct: 251 TTN-VANKAQFRGNIYNHRGSWRGSSFRNTRGG-----RGKGRPSND-----ICQVCNKH 310
Query: 324 GHSAMVCYHRFDKEFSPVHKRGNGNGNYPPSRGNGQQLQQQSNVFMTAQQTATPETIADP 383
GH+A+ C HR+DK ++ G+ N R Q+ N F+ ++ + D
Sbjct: 311 GHTAIECDHRYDKSYT-----GSSYSNANVER------QRTHNAFLASRYNS-----QDY 370
Query: 384 NWYADSGTSNHVTKNYENITNPTDYGGNEFVTIGNGAKLPITCVGSSSLSNGYHVLHLEN 443
WY DSG SNHVT + T+ G + +GNGAKL I GSS L N L+L +
Sbjct: 371 EWYFDSGASNHVTHQADKFQELTENSGKNSLIVGNGAKLKIDASGSSKLKN----LNLHD 430
Query: 444 VLCVPEIAKNLVSMSKLAEDNDVFIELHGNFCLVMDKSTRRVVLKGTLKDGLYQLHGAQP 503
VL VP+I KNL+S+SKL DN++ +E + C V DK T +V+L+G LKDGLYQL
Sbjct: 431 VLYVPQITKNLLSVSKLTSDNNIIVEFDNDCCFVKDKLTGKVLLRGILKDGLYQL----- 490
Query: 504 STSHGHSSTLQSNKNLESVFVVSNVMPSVNVVVSKQVWHRCLGHPAAKMLDLYSIPILCV 563
S+G S Q+NK+ P V + V K+ WHR LGHP+ +LD + +C
Sbjct: 491 --SNGSS---QTNKD-----------PCVYLSV-KESWHRKLGHPSNNVLD--KVLKICN 550
Query: 564 V----------------------------------------------------------- 623
V
Sbjct: 551 VKTSPSDKFKFCEACQLGKSHLLPFKSSSSHAQEVLELIHTDVWGPAPINSISGFKYYVH 610
Query: 624 -LDDFSRFVWLYPLKLKSDTQAAFSHFLNVVKTQFGSMIKAVQSDNGGEFVKVHKLCSQL 651
+DD SRF W+YPLK KSDT AF F N+V+ QF IK +Q D GGEF V K+ +
Sbjct: 611 FIDDSSRFTWIYPLKQKSDTIHAFMQFKNMVENQFNKRIKIIQCDGGGEFKPVQKVALET 611
BLAST of Lag0028603 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 2.6e-49
Identity = 179/677 (26.44%), Postives = 296/677 (43.72%), Query Frame = 0
Query: 23 LNQLLNQITSIKLDRGNFLLWKNLTMPILRSYKLEGHLLATSSCPPEFLQIEEPTNSSAT 82
LN ++ +T KL N+L+W + Y+L G L +++ PP +
Sbjct: 16 LNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATI----------- 75
Query: 83 TEVTAGASNLETVVSGASSSESRRTVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVMGVD 142
+++ VNP Y W D+L+ + +++ V V
Sbjct: 76 ------------------GTDAAPRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRAT 135
Query: 143 NAKEQWEAIEELFGVQSRAKEDFLRQTFQQTRKGNMKMSDYLRTMKNHADNLGFSGSPIS 202
A + WE + +++ S LR +Q KG + DY++ + D L G P+
Sbjct: 136 TAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMD 195
Query: 203 NRNLFSQVLLGLDEEYNVVVAIVQGR-ASVFWFELQAELLVFEKRLELQNSEKSAVNFGQ 262
+ +VL L EEY V+ + + E+ LL E ++ L S + +
Sbjct: 196 HDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKI-LAVSSATVIPI-- 255
Query: 263 NSTANMVVSKGGNSPKQQNHNNMTGRMGFNNNQRGNGNRYRGRGRGYNNYNNRT-----T 322
TAN V + + N+ N R N N N ++ ++ NN++
Sbjct: 256 --TANAVSHRNTTTTNNNNNGNRNNRYD-NRNNNNNSKPWQQSSTNFHPNNNQSKPYLGK 315
Query: 323 CQVCGKVGHSAMVCYHRFDKEFSPVHKRGNGNGNYPPSRGNGQQLQQQSNVFMTAQQTAT 382
CQ+CG GHSA C H + N PPS Q ++N+ + + ++
Sbjct: 316 CQICGVQGHSAKRCSQL-------QHFLSSVNSQQPPSPFT--PWQPRANLALGSPYSSN 375
Query: 383 PETIADPNWYADSGTSNHVTKNYENITNPTDYGGNEFVTIGNGAKLPITCVGSSSLSNGY 442
NW DSG ++H+T ++ N++ Y G + V + +G+ +PI+ GS+SLS
Sbjct: 376 -------NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKS 435
Query: 443 HVLHLENVLCVPEIAKNLVSMSKLAEDNDVFIELHGNFCLVMDKSTRRVVLKGTLKDGLY 502
L+L N+L VP I KNL+S+ +L N V +E V D +T +L+G KD LY
Sbjct: 436 RPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELY 495
Query: 503 Q--LHGAQPSTSHGHSSTLQSNKNLESVFVVSNVMPSV-NVVVSKQVWHRCLGHPAAKML 562
+ + +QP + S+ ++ + + + + PS+ N V+S + + +P+ K L
Sbjct: 496 EWPIASSQPVSLFASPSSKATHSSWHA--RLGHPAPSILNSVISN--YSLSVLNPSHKFL 555
Query: 563 -------------------------------DLYSIPIL--------CVVLDDFSRFVWL 622
D++S PIL + +D F+R+ WL
Sbjct: 556 SCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWL 615
Query: 623 YPLKLKSDTQAAFSHFLNVVKTQFGSMIKAVQSDNGGEFVKVHKLCSQLGIESRHSCPYT 652
YPLK KS + F F N+++ +F + I SDNGGEFV + + SQ GI S P+T
Sbjct: 616 YPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHT 635
BLAST of Lag0028603 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 2.0e-41
Identity = 178/678 (26.25%), Postives = 276/678 (40.71%), Query Frame = 0
Query: 23 LNQLLNQITSIKLDRGNFLLWKNLTMPILRSYKLEGHLLATSSCPPEFLQIEEPTNSSAT 82
LN ++ +T KL N+L+W + Y+L G L ++ PP +
Sbjct: 16 LNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----------- 75
Query: 83 TEVTAGASNLETVVSGASSSESRRTVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVMGVD 142
+++ VNP Y W D+L+ + +++ V V
Sbjct: 76 ------------------GTDAVPRVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRAT 135
Query: 143 NAKEQWEAIEELFGVQSRAKEDFLRQTFQQTRKGNMKMSDYLRTMKNHADNLGFSGSPIS 202
A + WE + +++ S LR D L G P+
Sbjct: 136 TAAQIWETLRKIYANPSYGHVTQLR-------------------FITRFDQLALLGKPMD 195
Query: 203 NRNLFSQVLLGLDEEYNVVVAIVQGRASVFWFELQAELLVFEKRLELQNSEKSAVNFGQ- 262
+ +VL L ++Y V+ + + + L +RL + S+ A+N +
Sbjct: 196 HDEQVERVLENLPDDYKPVIDQIAAK------DTPPSLTEIHERLINRESKLLALNSAEV 255
Query: 263 -NSTANMVVSKGGNSPKQQNHNNMTGRMGFNNNQRGNGNRYRGRGRGYNNYNNRT---TC 322
TAN+V + N+ + QN N R NNN R N + G +N + C
Sbjct: 256 VPITANVVTHRNTNTNRNQN-NRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRC 315
Query: 323 QVCGKVGHSAMVC--YHRFDKEFSPVHKRGNGNGNYPPSRGNGQQLQQQSNVFMTAQQTA 382
Q+C GHSA C H+F + QQQS T Q
Sbjct: 316 QICSVQGHSAKRCPQLHQFQSTTN----------------------QQQSTSPFTPWQPR 375
Query: 383 TPETIADP----NWYADSGTSNHVTKNYENITNPTDYGGNEFVTIGNGAKLPITCVGSSS 442
+ P NW DSG ++H+T ++ N++ Y G + V I +G+ +PIT GS+S
Sbjct: 376 ANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 435
Query: 443 LSNGYHVLHLENVLCVPEIAKNLVSMSKLAEDNDVFIELHGNFCLVMDKSTRRVVLKGTL 502
L L L VL VP I KNL+S+ +L N V +E V D +T +L+G
Sbjct: 436 LPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKT 495
Query: 503 KDGLYQ---------LHGAQPSTSHGHSSTLQSNKNLESVFVVSNV-----MPSVNVVVS 562
KD LY+ A P + HSS S S+ ++++V +P +N
Sbjct: 496 KDELYEWPIASSQAVSMFASPCSKATHSS-WHSRLGHPSLAILNSVISNHSLPVLNPSHK 555
Query: 563 KQVWHRCLGHPAAKM-----------------LDLYSIPIL--------CVVLDDFSRFV 622
C + + K+ D++S PIL + +D F+R+
Sbjct: 556 LLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYT 613
Query: 623 WLYPLKLKSDTQAAFSHFLNVVKTQFGSMIKAVQSDNGGEFVKVHKLCSQLGIESRHSCP 651
WLYPLK KS + F F ++V+ +F + I + SDNGGEFV + SQ GI S P
Sbjct: 616 WLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPP 613
BLAST of Lag0028603 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 2.2e-16
Identity = 136/595 (22.86%), Postives = 235/595 (39.50%), Query Frame = 0
Query: 103 ESRRTVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVMGVDNAKEQWEAIEELFGVQSRAK 162
+S++ + E W +D+ + ++ +V ++ D A+ W +E L+ ++
Sbjct: 40 DSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTN 99
Query: 163 EDFL-RQTFQQTRKGNMKMSDYLRTMKNHADNLGFSGSPISNRNLFSQVLLGLDEEY-NV 222
+ +L +Q + +L L G I + +L L Y N+
Sbjct: 100 KLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNL 159
Query: 223 VVAIVQGRASVFWFELQAELLVFEKRLELQNSEKSAVNFGQNSTANMVVSKGGNSPKQQN 282
I+ G+ ++ ++ + LL+ EK K N GQ ++++G Q++
Sbjct: 160 ATTILHGKTTIELKDVTSALLLNEK------MRKKPENQGQ-----ALITEGRGRSYQRS 219
Query: 283 HNNMTGRMGFNNNQRGNGNRYRGRGRGYNNYNNRT-TCQVCGKVGHSAMVCYHRFDKEFS 342
NN GR G RG+ N +R C C + GH C
Sbjct: 220 SNNY-GRSG-------------ARGKSKNRSKSRVRNCYNCNQPGHFKRDC--------- 279
Query: 343 PVHKRGNGNGNYPPSRGNGQQLQQQSN---VFMTAQQTATPETIADPNWYADSGTSNHVT 402
P ++G G + + N + Q ++ +F+ ++ + + W D+ S+H T
Sbjct: 280 PNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHAT 339
Query: 403 KNYENITNPTDYGGNEFVTI--GNGAKLPITCVGSSSL-SNGYHVLHLENVLCVPEIAKN 462
+ Y +F T+ GN + I +G + +N L L++V VP++ N
Sbjct: 340 PVRDLFCR---YVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMN 399
Query: 463 LVSMSKLAEDNDVFIELHGNFCLVMDKSTRRVVLKGTLKDGLY---------QLHGAQPS 522
L+ S +A D D + N + K + V+ KG + LY +L+ AQ
Sbjct: 400 LI--SGIALDRDGYESYFANQKWRLTKGS-LVIAKGVARGTLYRTNAEICQGELNAAQDE 459
Query: 523 TS-------HGHSS----TLQSNKNLESVFVVSNVMPSVNVVVSKQ--VWHRCLGHPAAK 582
S GH S + + K+L S + V P + KQ V +
Sbjct: 460 ISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLN 519
Query: 583 MLDLYSIPI--------------LCVVLDDFSRFVWLYPLKLKSDTQAAFSHFLNVVKTQ 642
+LDL + +DD SR +W+Y LK K F F +V+ +
Sbjct: 520 ILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERE 579
Query: 643 FGSMIKAVQSDNGGEFV--KVHKLCSQLGIESRHSCPYTSAQNGRAERKNRHVVE 651
G +K ++SDNGGE+ + + CS GI + P T NG AER NR +VE
Sbjct: 580 TGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVE 594
BLAST of Lag0028603 vs. ExPASy TrEMBL
Match:
A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)
HSP 1 Score: 415.6 bits (1067), Expect = 3.8e-112
Identity = 271/657 (41.25%), Postives = 346/657 (52.66%), Query Frame = 0
Query: 10 PYSASTGTFSSPPLNQLLNQITSIKLDRGNFLLWKNLTMPILRSYKLEGHLLATSSCPPE 69
P S F+SPPLNQLLNQITSIK+DRGNFLLW+NL +PILRSYKL +L CPP
Sbjct: 14 PAVVSGAVFTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPPT 73
Query: 70 FL-QIEEPTNSSATTEVTAGASNLETVVSGASSSESRRTVNPQYEAWVAVDQLLLGWLYN 129
L + PTN + G++SS+S T+NP YEAW+ VD+LLLGWLYN
Sbjct: 74 HLVPTDTPTN-----------------IEGSTSSQSSPTLNPTYEAWIVVDKLLLGWLYN 133
Query: 130 SMTPEVATQVMGVDNAKEQWEAIEELFGVQSRAKEDFLRQTFQQTRKGNMKMSDYLRTMK 189
SM +VA QVMG ++E W A++ELFGVQSRA+ D+L+Q FQQT KG+++M +YL+ MK
Sbjct: 134 SMAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMK 193
Query: 190 NHADNLGFSGSPISNRNLFSQVLLGLDEEYNVVVAIVQGRASVFWFELQAELLVFEKRLE 249
+HADNL +GS +S R+L SQVL GLDEEYN +V VQG+ ++ W E+ AELL +EKRLE
Sbjct: 194 SHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLE 253
Query: 250 LQNSEKSAVNFGQNSTANMVVSKGGNSPKQQNHNNMTGRMGFNNNQRGNGNRYRGRGRGY 309
QNS KS + Q T ++ G + Q NN NN G+ RG GY
Sbjct: 254 YQNSLKSGIPINQTQTPSVNYVDGRSFQTNQRTNN-------GNNSHGSNTH---RGGGY 313
Query: 310 NNYNNRTTCQVCGKVGHSAMVCYHRFDKEFSPVHKRGNGNGNYPPSRGNGQQLQQQSNVF 369
G G +R G G P N NVF
Sbjct: 314 QR----------GSFG------------------QRNRGRGPQPTQHKNFTPSNSGPNVF 373
Query: 370 M---TAQQTATPETIADPNWYADSGTSNHVTKNYENITNPTDYGGNEFVTIGNGAKLPIT 429
T+ TPET+ DP+WYADSG ++HVT N N+ DY G E V + NG KL I+
Sbjct: 374 AAHHTSTTVTTPETVIDPSWYADSGATSHVTANPNNVEQKVDYSGTENVIVANGNKLSIS 433
Query: 430 CVGSSSLSNGYHVLHLENVLCVPEIAKNLVSMSKLAEDNDVFIELHGNFCLVMDKSTRRV 489
+GS+++ L L++VL VP+IAKNL DK++ R
Sbjct: 434 HIGSTNIHASGGSLKLKDVLRVPDIAKNL------------------------DKASGRT 493
Query: 490 VLKGTLKDGLYQL---HGAQPSTS------HGHSSTLQSNKNLESVFVVSN--VMPSVNV 549
+LKGTLKD LY+L H + P+T H+ SN L S + +NV
Sbjct: 494 LLKGTLKDNLYRLDRSHRSPPATPTLTAPLFAHTVVSLSNNTLSSEKPTPSFPFAEHINV 541
Query: 550 VVSKQVWHRCLGHPAAKMLDLYSIPILCVVLDDFSRFVWLYPLKLKSDTQAAFSHFLNVV 609
VVS VWH+ LGHP+ ++L L
Sbjct: 554 VVSTTVWHKRLGHPSIQVLTL--------------------------------------- 541
Query: 610 KTQFGSMIKAVQSDNGGEFVKVHKLCSQLGIESRHSCPYTSAQNGRAERKNRHVVET 652
QSD GGE+ +H LC LGI+ R S PYTSAQNGRAERK+RH+VET
Sbjct: 614 -----------QSDGGGEYQPIHSLCRNLGIQIRVSYPYTSAQNGRAERKHRHIVET 541
BLAST of Lag0028603 vs. ExPASy TrEMBL
Match:
A0A803PEH4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 408.7 bits (1049), Expect = 4.6e-110
Identity = 270/689 (39.19%), Postives = 373/689 (54.14%), Query Frame = 0
Query: 27 LNQITSIKLDRGNFLLWKNLTMPILRSYKLEGHLLATSSCPPEFLQIEEPTNSSATTEVT 86
LNQ S+KLDR N+ LWK + I+R ++L G+L T CPPEF+ + + T+VT
Sbjct: 45 LNQPFSLKLDRNNYTLWKTMVSTIVRGHRLHGYLSGTLMCPPEFVMVGD-------TQVT 104
Query: 87 AGASNLETVVSGASSSESRRTVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVMGVDNAKE 146
NP+YE W+ DQLL+GWLY+SMT +AT+VMG +A
Sbjct: 105 ----------------------NPEYENWIITDQLLMGWLYSSMTEGIATEVMGSHSAAN 164
Query: 147 QWEAIEELFGVQSRAKEDFLRQTFQQTRKGNMKMSDYLRTMKNHADNLGFSGSPISNRNL 206
+E L+G S++K D R Q TRKG+ MS+YLR KN ++ L +G P +L
Sbjct: 165 LQRNLESLYGAYSKSKMDDTRTLIQTTRKGSTLMSEYLRQKKNWSNMLALAGDPYPEAHL 224
Query: 207 FSQVLLGLDEEYNVVVAIVQGRASVFWFELQAELLVFEKRLE-LQNSEKSAVNFGQNS-T 266
+ VL GLD EY +V ++ R++ W ELQ LL F+ ++E LQN ++ +S
Sbjct: 225 VANVLFGLDAEYLSIVVQIEARSNTTWQELQDLLLSFDSKIERLQNLTLNSNKATSSSPQ 284
Query: 267 ANMVVSKGGNSPKQ--QNHNNMTGRMGFNNNQRGNGNRYRGRGRGYNNYNNRTTCQVCGK 326
ANM N + Q+ N T G +N RG NR+RGRGRG + +R TCQV GK
Sbjct: 285 ANMAAKTNNNGRGRGFQSQNASTNSGGLFSNSRGTSNRFRGRGRGPGS-GSRPTCQVYGK 344
Query: 327 VGHSAMVCYHRFDKEFSPVHKRGNGNGNYPPSRGNGQQLQQQSNVFMTAQQTATPETIAD 386
GH+A VCY+RFD+ + + N P ++ Q + F+ ATPE +
Sbjct: 345 YGHTAAVCYNRFDESYM------GSDPNNPHNQNKAGQTNNNHSAFV-----ATPEVLEF 404
Query: 387 PNWYADSGTSNHVTKNYENITNPTDYGGNEFVTIGNGAKLPITCVGSSSLS--NGYHVLH 446
W+ADSG SNH+T + N+T DY G E V +GNG+KL IT +G+ L+ +G ++L
Sbjct: 405 DAWFADSGASNHITSDPANLTQKQDYNGKESVVVGNGSKLRITHIGNGKLNIESGNYLL- 464
Query: 447 LENVLCVPEIAKNLVSMSKLAEDNDVFIELHGNFCLVMDKSTRRVVLKGTLKDGLYQLHG 506
L+++L VP+IAKNLVS+SKLA DN+V IE + NFCLV DK T++V+L G LKD LYQL
Sbjct: 465 LKDMLLVPKIAKNLVSVSKLATDNNVLIEFYSNFCLVKDKVTKKVLLHGVLKDELYQLDS 524
Query: 507 AQPSTSHGHSS---------TLQSNKNLE--------------------SVFVVSNVMPS 566
+SH + ++ SN N S+ V+++V+ S
Sbjct: 525 PFTKSSHPYQQSNFLSAFTISVDSNVNQSQTDSLLISQMDVGHRRLGHPSIKVLNHVLES 584
Query: 567 VNVVVSKQVW----------------HRCLGHPAAKMLDLY------SIPILCVV----- 626
VNV VSK R A +LDL PI +
Sbjct: 585 VNVSVSKNAMKTVCDACQYGKAHALPFRSSNTRAKSVLDLIHTDLWGPAPIASNINHHYY 644
Query: 627 ---LDDFSRFVWLYPLKLKSDTQAAFSHFLNVVKTQFGSMIKAVQSDNGGEFVKVHKLCS 651
+DD+SR+ WLYPLKLKSD AAF F +V+ QF IK+++SD+GGE+ L
Sbjct: 645 IHFVDDYSRYTWLYPLKLKSDALAAFIQFKALVENQFYKKIKSLRSDSGGEYKPFVDLVQ 691
BLAST of Lag0028603 vs. ExPASy TrEMBL
Match:
A0A2Z6MBG6 (Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_77270 PE=4 SV=1)
HSP 1 Score: 390.6 bits (1002), Expect = 1.3e-104
Identity = 254/655 (38.78%), Postives = 348/655 (53.13%), Query Frame = 0
Query: 32 SIKLDRGNFLLWKNLTMPILRSYKLEGHLLATSSCPPEFLQIEEPTNSSATTEVTAGASN 91
S+KLDR N+ LWK+L +P++R KL+G++L T CP EF+
Sbjct: 18 SVKLDRNNYPLWKSLVLPVIRGCKLDGYMLGTEGCPEEFI-------------------- 77
Query: 92 LETVVSGASSSESRRTVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVMGVDNAKEQWEAI 151
+SS+S + N + W A DQ LLGW+ NSMT E+ATQ++ + +K+ W+
Sbjct: 78 --------TSSDSSKNKNSAFVEWQANDQRLLGWMLNSMTTEIATQLLHCETSKQLWDEA 137
Query: 152 EELFGVQSRAKEDFLRQTFQQTRKGNMKMSDYLRTMKNHADNLGFSGSPISNRNLFSQVL 211
+ L G +R++ +L+ F RKG MKM DYL MKN D L +G+P+S +L Q L
Sbjct: 138 QSLAGAHTRSQIIYLKSEFHSIRKGEMKMEDYLIKMKNLVDKLKLAGNPVSTSDLIIQTL 197
Query: 212 LGLDEEYNVVVAIVQGRASVFWFELQAELLVFEKRLELQNSEKSAVNFGQNSTANMVVSK 271
GLD EYN VV + + ++ W +LQA+LL FE R+E N + N N+TAN+
Sbjct: 198 NGLDSEYNPVVVKLSDQTTLSWVDLQAQLLTFESRIEQLN---NLTNLTLNATANVA--- 257
Query: 272 GGNSPKQQNHNNMTGRMGFNNNQRGNGNR--YRGRGRGYNNYNNRTTCQVCGKVGHSAMV 331
N ++ G+ NNN RG+ +R GRGRG + N CQVCG H A+
Sbjct: 258 --------NRSDHRGKSS-NNNWRGSNSRGWRGGRGRGKSGKN---PCQVCGLSNHIAID 317
Query: 332 CYHRFDKEFSPVHKRGNGNGNYPPSRGNGQQLQQQSNVFMTAQQTATPETIADPNWYADS 391
C+HRFDK +S R N + G Q N F+ +Q ++ D +WY DS
Sbjct: 318 CFHRFDKTYS----RSNHSA--------GHDKQGSHNAFLASQ-----NSVEDYDWYFDS 377
Query: 392 GTSNHVTKNYENITNPTDYGGNEFVTIGNGAKLPITCVGSSSLSNGYHVLHLENVLCVPE 451
G SNHVT E + T++ G + +GNG KL I GSS L + L+L ++L VP
Sbjct: 378 GASNHVTHQTEKFQDLTEHHGKNSLVVGNGEKLAILATGSSKLKS----LNLHDILYVPN 437
Query: 452 IAKNLVSMSKLAEDNDVFIELHGNFCLVMDKSTRRVVLKGTLKDGLYQLHGAQPSTSH-- 511
I KNL+S+SKLA DN++ +E N C V DK T +V+LKG LKDGLYQL G + + S
Sbjct: 438 ITKNLLSVSKLAADNNILVEFDENCCFVKDKLTGKVILKGLLKDGLYQLSGTKRNPSAFV 497
Query: 512 ----------GHSSTLQSNKNLESVFVVSNVMPSVNVVVSKQVWH--------RCLGHPA 571
GH + +K LES V V PS N + + + A
Sbjct: 498 SVKESWHRRLGHPNNKVLDKVLESCKV--KVPPSDNFSFCEACQYGKMHLLPFKSSSSHA 557
Query: 572 AKMLDLY------SIPILCV--------VLDDFSRFVWLYPLKLKSDTQAAFSHFLNVVK 631
+ L+L PI+ +DDFSRF W+YPLK KS+T AF F N+ +
Sbjct: 558 QEPLELVHTDVWGPAPIMTSSGFKYYVHFVDDFSRFTWIYPLKQKSETVQAFIQFKNLTE 603
Query: 632 TQFGSMIKAVQSDNGGEFVKVHKLCSQLGIESRHSCPYTSAQNGRAERKNRHVVE 651
QF IK +Q D GGE+ V KL + GI+ R SCPYTS QNGRAERK+RH+ E
Sbjct: 618 NQFNKRIKVIQCDGGGEYKPVQKLAVEAGIQFRMSCPYTSQQNGRAERKHRHITE 603
BLAST of Lag0028603 vs. ExPASy TrEMBL
Match:
A0A2K3LCM1 (Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g032236 PE=4 SV=1)
HSP 1 Score: 387.9 bits (995), Expect = 8.4e-104
Identity = 252/659 (38.24%), Postives = 349/659 (52.96%), Query Frame = 0
Query: 27 LNQITSIKLDRGNFLLWKNLTMPILRSYKLEGHLLATSSCPPEFLQIEEPTNSSATTEVT 86
L S+KLDR N+ LW+++ +PI+R +L+G++L CP EF+
Sbjct: 13 LPSTVSVKLDRDNYPLWQSMVLPIIRGARLDGYMLGKKKCPEEFI--------------- 72
Query: 87 AGASNLETVVSGASSSESRRTVNPQYEAWVAVDQLLLGWLYNSMTPEVATQVMGVDNAKE 146
++++S + NP++E W A DQ LLGWL NSMT +ATQ++ + + +
Sbjct: 73 -------------TAADSSKKFNPEFEDWQAYDQQLLGWLRNSMTVGIATQLLHCETSMQ 132
Query: 147 QWEAIEELFGVQSRAKEDFLRQTFQQTRKGNMKMSDYLRTMKNHADNLGFSGSPISNRNL 206
W+ + L G +R++ +L+ F TRKG MKM DYL MKN AD L +G+PIS +L
Sbjct: 133 LWDEAQSLAGAHTRSQITYLKSEFHSTRKGEMKMEDYLIKMKNLADKLKLAGNPISTSDL 192
Query: 207 FSQVLLGLDEEYNVVVAIVQGRASVFWFELQAELLVFEKRLELQNSEKSAVNFGQNSTAN 266
Q L GLD EYN VV + + ++ W +LQA+LL FE R+E N S N N+TAN
Sbjct: 193 IIQTLNGLDSEYNPVVVKLSDQTTLSWVDLQAQLLTFENRIEQLN---SLTNLTLNATAN 252
Query: 267 MVVSKGGNSPKQQNHNNMTGRMGFNNNQRGNGNR----YRGRGRGYNNYNNRTTCQVCGK 326
V K + + N NN G NNN RG+ R RGRGR + +TTCQVCG
Sbjct: 253 -VAKKSDHRGNRFNSNN--NWRGSNNNWRGSNFRGWRGGRGRGRSF-----KTTCQVCGL 312
Query: 327 VGHSAMVCYHRFDKEFSPVHKRGNGNGNYPPSRGNGQQLQQQSNVFMTAQQTATPETIAD 386
H A+ C++RFDK +S R N + N Q N F+ +Q +I D
Sbjct: 313 DNHIAIDCFYRFDKTYS----RSNHSAN--------NDKQGSHNAFLASQ-----NSIED 372
Query: 387 PNWYADSGTSNHVTKNYENITNPTDYGGNEFVTIGNGAKLPITCVGSSSLSNGYHVLHLE 446
+WY DSG SNHVT + N +++ G + +GNG KL I GSS L + L+L
Sbjct: 373 YDWYFDSGASNHVTHQTDKFQNLSEHHGKNSLIVGNGEKLEIVATGSSKLKS----LNLH 432
Query: 447 NVLCVPEIAKNLVSMSKLAEDNDVFIELHGNFCLVMDKSTRRVVLKGTLKDGLYQLHGAQ 506
++L VP+I KNL+S+SKLA DN++ +E N C V DK T + +L+G LKDGLYQL
Sbjct: 433 DILYVPKITKNLLSVSKLAADNNILVEFDENCCFVKDKLTGKAILRGILKDGLYQLSEKD 492
Query: 507 PSTSHGHSSTLQSNKNLESVFVVSNVMPSVNVVVSKQ-----------------VWHRCL 566
S + + V+ V+ S NV +S +
Sbjct: 493 SSAYVSIKESWHRKLGHPNNKVLDIVLKSCNVKLSPSDQFSFCEACQYGKMHFLPFKTSF 552
Query: 567 GHPAAKMLDLY------SIPILCV--------VLDDFSRFVWLYPLKLKSDTQAAFSHFL 626
H A ++L+L PI+ +DDF+RF W+YPLK KSDT AF F
Sbjct: 553 SH-AKEILELVHTDVWGPAPIISSSGFKYYVHFIDDFTRFTWIYPLKQKSDTAHAFIQFK 610
Query: 627 NVVKTQFGSMIKAVQSDNGGEFVKVHKLCSQLGIESRHSCPYTSAQNGRAERKNRHVVE 651
N+V+ QF IK +Q D GGE+ V K + GI+ R SCPYTS QNGRAERK+RH+ E
Sbjct: 613 NMVENQFSKKIKTIQCDGGGEYKPVQKHAIEAGIQFRMSCPYTSQQNGRAERKHRHIAE 610
BLAST of Lag0028603 vs. ExPASy TrEMBL
Match:
A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 381.3 bits (978), Expect = 7.9e-102
Identity = 221/490 (45.10%), Postives = 297/490 (60.61%), Query Frame = 0
Query: 1 MENVYFTRIPYSASTGTFSSPPLNQLLNQITSIKLDRGNFLLWKNLTMPILRSYKLEGHL 60
M N T P S S+ FS+PPLNQ+LNQ+T++KLDR N+LLWK L +PIL+ YKLEGHL
Sbjct: 1 MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHL 60
Query: 61 LATSSCPPEFLQIEEPTNSSATTEVTAGASNLETVVSGASSSESRRTVNPQYEAWVAVDQ 120
A + CP F+ +N++ T E GA GASSS + R VNP +E WV D
Sbjct: 61 TAETPCPSHFVLSASSSNTTVTEE---GAD----ATIGASSSITPRIVNPLFEQWVTTDL 120
Query: 121 LLLGWLYNSMTPEVATQVMGVDNAKEQWEAIEELFGVQSRAKEDFLRQTFQQTRKGNMKM 180
LLLGWLYNSMTP+VA Q+MG N ++ W+A ++ FGVQSRA+EDFLRQ Q TRK
Sbjct: 121 LLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK----- 180
Query: 181 SDYLRTMKNHADNLGFSGSPISNRNLFSQVLLGLDEEYNVVVAIVQGRASVFWFELQAEL 240
GLDE YN+V+ ++QG+ + W ++Q++L
Sbjct: 181 --------------------------------GLDEVYNLVIVVIQGKPDISWLDMQSKL 240
Query: 241 LVFEKRLELQNSE-KSAVNFGQNSTANMVVSKGGNSPKQQNHNNMTGRMGFNNNQRGNGN 300
L+FEKRL+ QN++ K+ N Q+ NM N + Q++ G N Q +G
Sbjct: 241 LIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQSNKKFYG----YNRQHFSGQ 300
Query: 301 RYRGRGRGYNNYNNRTTCQVCGKVGHSAMVCYHRFDKEF-SPVHKRGN---GNGNYPPSR 360
R N NN TCQ+CGK GHSA+VCY+RF+KEF SP+ + N NG+ P+
Sbjct: 301 R--------GNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSPNP 360
Query: 361 GNGQQLQQQSNVFMTAQQT---ATPETIADPNWYADSGTSNHVTKNYENITNPTDYGGNE 420
VF++ Q ATP+T+ DPNWY DSG +NHVT+ N+TNPT+Y G E
Sbjct: 361 A----------VFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIE 420
Query: 421 FVTIGNGAKLPITCVGSSSLSNGYHVLHLENVLCVPEIAKNLVSMSKLAEDNDVFIELHG 480
VT+GNG +L I+ VG++ L++G L L+N+LCVP+IAKNL+S+SKLA+DN ++IE HG
Sbjct: 421 KVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVSKLAQDNHIYIEFHG 424
Query: 481 NFCLVMDKST 483
C + DKST
Sbjct: 481 YCCFIKDKST 424
BLAST of Lag0028603 vs. TAIR 10
Match:
AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 50.8 bits (120), Expect = 4.7e-06
Identity = 55/202 (27.23%), Postives = 97/202 (48.02%), Query Frame = 0
Query: 115 WVAVDQLLLGWLYNSMTPEVATQVMGVD-NAKEQWEAIEELFGVQSRAKEDFLRQTFQQT 174
W D L+ W+Y ++T + ++ V A++ W ++E LF A+ + T
Sbjct: 67 WKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTT 126
Query: 175 RKGNMKMSDYLRTMKNHADNLGFSGSPISNRNLFSQVLLGLDEEYNVVVAIVQGRASVFW 234
++ + +Y + +K+ +D L SPIS+R L +L GL E+Y+ ++ +++ ++
Sbjct: 127 TIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPS 186
Query: 235 F-ELQAELLVFEKRLELQN-SEKSAVNFGQNSTANMVVSKGGNSPKQQNHNNMTGRMGFN 294
F E ++ LL+ E RL ++ S S N S V + Q+ HNN MG
Sbjct: 187 FTEARSMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPRQQERYPQEYHNN-NSNMGRG 246
Query: 295 NNQRGNGNRYRGRGRGYNNYNN 314
+++ N GR YNN NN
Sbjct: 247 RSKKKNRGGGSSDGR-YNNNNN 266
BLAST of Lag0028603 vs. TAIR 10
Match:
AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 49.3 bits (116), Expect = 1.4e-05
Identity = 51/202 (25.25%), Postives = 98/202 (48.51%), Query Frame = 0
Query: 115 WVAVDQLLLGWLYNSMTP-EVATQVMGVDNAKEQWEAIEELFGVQSRAKEDFLRQTFQQT 174
W D ++ LY ++TP + + +++ W I+ F A+ L +
Sbjct: 65 WQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRTK 124
Query: 175 RKGNMKMSDYLRTMKNHADNLGFSGSPISNRNLFSQVLLGLDEEYNVVVAIVQGRASVFW 234
G+M+++DY R MK AD+L P+++RNL VL GL+ +++ ++ +++ R
Sbjct: 125 DIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFPS 184
Query: 235 FELQAELLVFEKRLELQNSEKSAVNFGQNSTANMVVSKGGNSPKQQNHNNMTGRMGFNNN 294
F+ A ++ E+ L+ + K +S+++ V++ P + +MG+
Sbjct: 185 FD-DAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGGNQMGYRGR 244
Query: 295 QRGNGNRYRGRGRGYNNYNNRT 316
RGN N +RGRG ++ YN T
Sbjct: 245 GRGN-NIFRGRGGRFSYYNMPT 264
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022151683.1 | 7.8e-112 | 41.25 | uncharacterized protein LOC111019598 [Momordica charantia] | [more] |
GAU19483.1 | 2.7e-104 | 38.78 | hypothetical protein TSUD_77270 [Trifolium subterraneum] | [more] |
PNX76291.1 | 1.7e-103 | 38.24 | gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium praten... | [more] |
XP_016902197.1 | 1.6e-101 | 45.10 | PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo] | [more] |
PNX78574.1 | 1.5e-99 | 36.97 | retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 2.6e-49 | 26.44 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 2.0e-41 | 26.25 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P10978 | 2.2e-16 | 22.86 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DCW4 | 3.8e-112 | 41.25 | uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A803PEH4 | 4.6e-110 | 39.19 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2Z6MBG6 | 1.3e-104 | 38.78 | Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 ... | [more] |
A0A2K3LCM1 | 8.4e-104 | 38.24 | Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) OS=Trifolium prat... | [more] |
A0A1S4E1U6 | 7.9e-102 | 45.10 | uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |
AT5G48050.1 | 4.7e-06 | 27.23 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |
AT1G34070.1 | 1.4e-05 | 25.25 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |