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Lag0028598 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATAATCGAAAAACGTATGGCTCTCGAGCTTTCACTAAAGGAATCTTGTGGAATAAACACATCAGAGGTTAGTCTGCAAGAGAATCATACTAAGCTTCAAAACTGTCTGATAGGGAAGATTGTTGCTCAAAGAATTATAAACATTGAAGCTTTTAGGAAAACTATGAAAAAAGTGTGGAATTTTTGTTGTGGGTTAGTCATCGATAATATTGAAGACAACCTATTTCTAATAAACCCGCAATCTGTTGAGGGAAGGGATAGAATTTTGGAAGAGAGCCCGGGGTGTTTCGATGGAAATTTGATTCTTCTTAAAGCTCCAACAACCTTCAATCTGCCAGAAGAAATGATTTTTGATGAAGCACAGTTCTGTGTTCAATTCCACCATTTACCTCTTGGTCTACGAAACGACATTGTGGCACAAACGCCCGATAGCCGGTTAGGGATAGTACAGAGGATAGATACTAATTAA ATGGATATAATCGAAAAACGTATGGCTCTCGAGCTTTCACTAAAGGAATCTTGTGGAATAAACACATCAGAGGTTAGTCTGCAAGAGAATCATACTAAGCTTCAAAACTGTCTGATAGGGAAGATTGTTGCTCAAAGAATTATAAACATTGAAGCTTTTAGGAAAACTATGAAAAAAGTGTGGAATTTTTGTTGTGGGTTAGTCATCGATAATATTGAAGACAACCTATTTCTAATAAACCCGCAATCTGTTGAGGGAAGGGATAGAATTTTGGAAGAGAGCCCGGGGTGTTTCGATGGAAATTTGATTCTTCTTAAAGCTCCAACAACCTTCAATCTGCCAGAAGAAATGATTTTTGATGAAGCACAGTTCTGTGTTCAATTCCACCATTTACCTCTTGGTCTACGAAACGACATTGTGGCACAAACGCCCGATAGCCGGTTAGGGATAGTACAGAGGATAGATACTAATTAA ATGGATATAATCGAAAAACGTATGGCTCTCGAGCTTTCACTAAAGGAATCTTGTGGAATAAACACATCAGAGGTTAGTCTGCAAGAGAATCATACTAAGCTTCAAAACTGTCTGATAGGGAAGATTGTTGCTCAAAGAATTATAAACATTGAAGCTTTTAGGAAAACTATGAAAAAAGTGTGGAATTTTTGTTGTGGGTTAGTCATCGATAATATTGAAGACAACCTATTTCTAATAAACCCGCAATCTGTTGAGGGAAGGGATAGAATTTTGGAAGAGAGCCCGGGGTGTTTCGATGGAAATTTGATTCTTCTTAAAGCTCCAACAACCTTCAATCTGCCAGAAGAAATGATTTTTGATGAAGCACAGTTCTGTGTTCAATTCCACCATTTACCTCTTGGTCTACGAAACGACATTGTGGCACAAACGCCCGATAGCCGGTTAGGGATAGTACAGAGGATAGATACTAATTAA MDIIEKRMALELSLKESCGINTSEVSLQENHTKLQNCLIGKIVAQRIINIEAFRKTMKKVWNFCCGLVIDNIEDNLFLINPQSVEGRDRILEESPGCFDGNLILLKAPTTFNLPEEMIFDEAQFCVQFHHLPLGLRNDIVAQTPDSRLGIVQRIDTN Homology
BLAST of Lag0028598 vs. NCBI nr
Match: TXG57282.1 (hypothetical protein EZV62_018595 [Acer yangbiense]) HSP 1 Score: 94.0 bits (232), Expect = 1.3e-15 Identity = 44/123 (35.77%), Postives = 72/123 (58.54%), Query Frame = 0
BLAST of Lag0028598 vs. NCBI nr
Match: OMO61345.1 (reverse transcriptase [Corchorus capsularis]) HSP 1 Score: 91.7 bits (226), Expect = 6.2e-15 Identity = 44/145 (30.34%), Postives = 78/145 (53.79%), Query Frame = 0
BLAST of Lag0028598 vs. NCBI nr
Match: OMP10859.1 (hypothetical protein COLO4_04212 [Corchorus olitorius]) HSP 1 Score: 91.7 bits (226), Expect = 6.2e-15 Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 0
BLAST of Lag0028598 vs. NCBI nr
Match: XP_040990949.1 (uncharacterized protein LOC121238174 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 91.7 bits (226), Expect = 6.2e-15 Identity = 50/156 (32.05%), Postives = 79/156 (50.64%), Query Frame = 0
BLAST of Lag0028598 vs. NCBI nr
Match: XP_018839072.2 (uncharacterized protein LOC109004822 [Juglans regia] >XP_035545946.1 uncharacterized protein LOC118348429 [Juglans regia] >XP_035549695.1 uncharacterized protein LOC118349400 [Juglans regia] >KAF5443011.1 hypothetical protein F2P56_035608 [Juglans regia]) HSP 1 Score: 90.9 bits (224), Expect = 1.1e-14 Identity = 49/146 (33.56%), Postives = 80/146 (54.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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