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Lag0028587 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATTTTAACCTATTATTATTATTATTTTCAATGTAATAGATGCATGCAAATTATTATGTTGTAGTCTTTACTATAATCATCCTACAAGATGGGATTAAATGACTTCATTCCTAGTGACTCTTCTTGTATAGTTTGTCAGACCTTATATGTTGTTCTTACAAGGATTCACCTGATTATTATTTTTGTGCAGTTCATTGATTACCAGCACAATTTAGGACTTCTTTTGATAGAGAAGAAAGAGTGGGCTTCAAAGTATGACCAACTAGGGCAAGATTTAGCAGAAACTGAGGAGATCTTCAAACGTGAACAATCAGCACATTTAATTGCACTATCCGAAGTTGAAACGAGGAGGGATAATTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACATGTGTTTAGTGTATGCTACCCTTGGCACTTCCATTCCTCTTTACCGCATTTGCTTATTTCTTTATGTTGTCATTTCCTCTTCTTTTTGCGTTCTTAGATAATCAATTTAATAGGCCACCAATCATAAATTCATATCAGGGAAAACATGTAATTTAGTGAGGTGACAGGCGGGGAGAGGAGTTGTGACATATTGGGAGGACGGAGGGTAGTGTCTATTCTTATGAAGGAGTATGCTTTTGTTTTGAAGAATCTTGCAGTAATGGGAGAGGAGGGAGCTCTCTGATCATTCCCAAGTTTGTACCTCTTTGTCATAAATAATACCATGTCCTATCACATTTGCCTATTCTGAAAATCAGTCTCATATTTCTATATATTGTACTTTTTTTGATGGAAAACCATCTTTCATTGAGAAAAATGAAAACCAAAAAGAGGAAAGACAGGGCAAAAGAAAGGGATTGGAGAATCCCATAAAGAGTGTAAAATGTGCCAAACTCTAAATTTCATGTCAAGACAACTTTGAGCTCATAAAAATTTTGAGTTTCTCTCTTAACAAATATTCCAAATAATGGTGCAAAAACCTACTTGCCACCAAAACTTCCTTTTTCCTTGAAGGGAGTTTGGAGGACCTCCTTTGGACAAGAGTATAATAATCTCTACTTGGAGTGATACTTACTCCAAAATGCTCCAAAAATCTACCCTATCTTAGCTGCAAAACGAAATCTCCAAAGATTATGATAGTTTCCTATGTAGCCTGTTTGAAAAGCACACATCATTGAGGGCCCAAAAGGCCCAAAACTAGGTTTAAGATTTGTGGACAAGGACAATAGTAGTTGGACCTTGATCGAGTTGTGACTTAGCCCATGCAGTTTGGAACTGTCTCTTCAAGGAGTTTGGCCTCAGTTTCGCTACACATGGTTTGTAGAAAGATTGTTGATGATTGAAAAGATCCTTGGGGATTTCTTTTGGGAAGGTGCAAAGGAAGATGGTGGAATGCATAATGTGAACAGGGCAAGAACTCGTCAAGCTAAATGGATATGGCAGTTTCTCTGTGAAGAAAATGCTCTTTGCAAGAAGGTCATCAAGCTTAATACTACCCCACGGCATTGAATCATCAATGGCCAACAACTCCCAATATAGGTTCATCTAAAGCACCATGAAAATTCATCTCAGTACTCAATAGTGATGTTTGGACCCACATTACATGATGTCTTGGCAATGGTACTCACATATCTTTTTGGCATGACAGGGCTTCTGAAAACAAATTCACAATGACCATCCTGAAGCTTTACAAACTTTCTGATTGTGTTAACAAGCAATAGTGGCTGAACTTTGGAATCTTGAAACCAACACTTGGGATCTTGGGCTTAGAAACAACTTAAAGATGATGAAATTGTTATGAAATTGCTAAATGGGCCTTGCTTTCGAATATTTTATCCTCTATTTCTTTATCTACCGTTATCGATTTTGGGAGACCAATACTAATTTCTCGATATTGATGAATAGTAGACCAAGGGAAAAATTCTTTGTAGAGAGAAGGATTAGACTAGGGAAGCCTATATCCCTCTTCTTATTTACTATTATAGGTGATTAGGTGATGCCTTAAGCCGATCTATTCATTATGGTTGTGAGAAAAGAATCCTCCAAAGGCCTAAGGGTCGACAATAAGAACCTATTGATAAGTCACCTTCAATTTGTTGATGACACCGCAATTTTTTGCCCTAATAACGATGATTGTCTCCAGGTGTGGTGGGATTTCTTGAACATTTTTTGGAAGGTGTAGGGCTCTCCCTCAATTCCTCCAAATCTTCTATAGTTGGAATCGATGTCGAGGAGGTGGAGGTAATTCAGCAAGCTGTCCGTTTGGGATGTAAGGCCAAACAGCTCCCTATAAACTACCTTGGAGTTTCTCTTGGTGAAAATATCAATCGAGAAGTTTTTGGGACCCTATGATTGATAAATTTTGAGCTAAAACACAACCCTCTCTTCCGGGGGGGGGGGGGACTCACTCTTGCTCAGTCCACCCTAAATAGTTTACCTATCTATTGGTTCTTGGTTTTTTTAGGAGATGGAAAAAGTCATAAGAAAACTTTTTTTGGAGGGGGGGTGCCTTTAATTCAGGTTGTCATCTTGCTAAATGGATTTGGACTTCTCTTCCTCTCGAATATGGGGGCCTTGGTATTGGTTCATTGAAACAGAGGAATACTGCTCTTCTCATTAAATGGTTGTGGAGATTTGCTCAAGAAGAGCAAGCTTTATGGAGAAAGGTAGTTGATAGTACCTATACGGCAGTGAGCCAAGTGGTTGGATGTCTCTTCCCCCAAAAGGGACCTCAAGGGCAAGACCGTGGTTGA ATGTTCATTGATTACCAGCACAATTTAGGACTTCTTTTGATAGAGAAGAAAGAGTGGGCTTCAAAGTATGACCAACTAGGGCAAGATTTAGCAGAAACTGAGGAGATCTTCAAACGTGAACAATCAGCACATTTAATTGCACTATCCGAAGTTGAAACGAGGAGGGATAATTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACATGTGTTTAGTTTTCGCTACACATGGTTTGTAGAAAGATTGTTGATGATTGAAAAGATCCTTGGGGATTTCTTTTGGGAAGGTGCAAAGGAAGATGGTGGAATGCATAATGTGAACAGGGCAAGAACTCGTCAAGCTAAATGGATATGGCAGGCTTCTGAAAACAAATTCACAATGACCATCCTGAAGCTTTACAAACTTTCTGATTGTGTGGTGGGATTTCTTGAACATTTTTTGGAAGGTGTAGGGCTCTCCCTCAATTCCTCCAAATCTTCTATAGTTGGAATCGATGTCGAGGAGGTGGAGGTAATTCAGCAAGCTGTCCGTTTGGGATGTTGTCATCTTGCTAAATGGATTTGGACTTCTCTTCCTCTCGAATATGGGGGCCTTGGTATTGGTTCATTGAAACAGAGGAATACTGCTCTTCTCATTAAATGGTTGTGGAGATTTGCTCAAGAAGAGCAAGCTTTATGGAGAAAGGTAGTTGATAGTACCTATACGGCAGTGAGCCAAGTGGTTGGATGTCTCTTCCCCCAAAAGGGACCTCAAGGGCAAGACCGTGGTTGA ATGTTCATTGATTACCAGCACAATTTAGGACTTCTTTTGATAGAGAAGAAAGAGTGGGCTTCAAAGTATGACCAACTAGGGCAAGATTTAGCAGAAACTGAGGAGATCTTCAAACGTGAACAATCAGCACATTTAATTGCACTATCCGAAGTTGAAACGAGGAGGGATAATTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACATGTGTTTAGTTTTCGCTACACATGGTTTGTAGAAAGATTGTTGATGATTGAAAAGATCCTTGGGGATTTCTTTTGGGAAGGTGCAAAGGAAGATGGTGGAATGCATAATGTGAACAGGGCAAGAACTCGTCAAGCTAAATGGATATGGCAGGCTTCTGAAAACAAATTCACAATGACCATCCTGAAGCTTTACAAACTTTCTGATTGTGTGGTGGGATTTCTTGAACATTTTTTGGAAGGTGTAGGGCTCTCCCTCAATTCCTCCAAATCTTCTATAGTTGGAATCGATGTCGAGGAGGTGGAGGTAATTCAGCAAGCTGTCCGTTTGGGATGTTGTCATCTTGCTAAATGGATTTGGACTTCTCTTCCTCTCGAATATGGGGGCCTTGGTATTGGTTCATTGAAACAGAGGAATACTGCTCTTCTCATTAAATGGTTGTGGAGATTTGCTCAAGAAGAGCAAGCTTTATGGAGAAAGGTAGTTGATAGTACCTATACGGCAGTGAGCCAAGTGGTTGGATGTCTCTTCCCCCAAAAGGGACCTCAAGGGCAAGACCGTGGTTGA MFIDYQHNLGLLLIEKKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVFSFRYTWFVERLLMIEKILGDFFWEGAKEDGGMHNVNRARTRQAKWIWQASENKFTMTILKLYKLSDCVVGFLEHFLEGVGLSLNSSKSSIVGIDVEEVEVIQQAVRLGCCHLAKWIWTSLPLEYGGLGIGSLKQRNTALLIKWLWRFAQEEQALWRKVVDSTYTAVSQVVGCLFPQKGPQGQDRG Homology
BLAST of Lag0028587 vs. NCBI nr
Match: XP_004147138.1 (protein CROWDED NUCLEI 3 [Cucumis sativus] >KAE8648619.1 hypothetical protein Csa_008601 [Cucumis sativus]) HSP 1 Score: 130.2 bits (326), Expect = 2.6e-26 Identity = 64/75 (85.33%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of Lag0028587 vs. NCBI nr
Match: XP_038907102.1 (protein CROWDED NUCLEI 1 isoform X2 [Benincasa hispida]) HSP 1 Score: 129.4 bits (324), Expect = 4.4e-26 Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lag0028587 vs. NCBI nr
Match: XP_038907101.1 (protein CROWDED NUCLEI 1 isoform X1 [Benincasa hispida]) HSP 1 Score: 129.4 bits (324), Expect = 4.4e-26 Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lag0028587 vs. NCBI nr
Match: KAG7032453.1 (Protein CROWDED NUCLEI 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 128.3 bits (321), Expect = 9.7e-26 Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Lag0028587 vs. NCBI nr
Match: XP_022930031.1 (protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita moschata] >XP_022930032.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 128.3 bits (321), Expect = 9.7e-26 Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Lag0028587 vs. ExPASy Swiss-Prot
Match: I0J0E7 (Nuclear matrix constituent protein 1 OS=Allium cepa OX=4679 GN=NMCP1 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16 Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of Lag0028587 vs. ExPASy Swiss-Prot
Match: A0A166B1A6 (Nuclear matrix constituent protein 1 OS=Daucus carota subsp. sativus OX=79200 GN=NMCP1 PE=1 SV=2) HSP 1 Score: 83.2 bits (204), Expect = 4.7e-15 Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of Lag0028587 vs. ExPASy Swiss-Prot
Match: Q0DY81 (Nuclear matrix constituent protein 1a OS=Oryza sativa subsp. japonica OX=39947 GN=NMCP1A PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 8.0e-15 Identity = 39/66 (59.09%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of Lag0028587 vs. ExPASy Swiss-Prot
Match: Q9SAF6 (Protein CROWDED NUCLEI 2 OS=Arabidopsis thaliana OX=3702 GN=CRWN2 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.8e-14 Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Lag0028587 vs. ExPASy Swiss-Prot
Match: F4HRT5 (Protein CROWDED NUCLEI 1 OS=Arabidopsis thaliana OX=3702 GN=CRWN1 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.0e-13 Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 0
BLAST of Lag0028587 vs. ExPASy TrEMBL
Match: A0A6J1K004 (protein CROWDED NUCLEI 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489810 PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 4.7e-26 Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Lag0028587 vs. ExPASy TrEMBL
Match: A0A6J1EPS4 (protein CROWDED NUCLEI 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436467 PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 4.7e-26 Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Lag0028587 vs. ExPASy TrEMBL
Match: A0A5D3BM77 (Protein CROWDED NUCLEI 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00180 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.2e-24 Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of Lag0028587 vs. ExPASy TrEMBL
Match: A0A1S3CSZ3 (protein CROWDED NUCLEI 3 OS=Cucumis melo OX=3656 GN=LOC103504607 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.2e-24 Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of Lag0028587 vs. ExPASy TrEMBL
Match: A0A6J1E0M3 (protein CROWDED NUCLEI 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025314 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.4e-24 Identity = 66/93 (70.97%), Postives = 74/93 (79.57%), Query Frame = 0
BLAST of Lag0028587 vs. TAIR 10
Match: AT1G13220.1 (nuclear matrix constituent protein-related ) HSP 1 Score: 79.3 bits (194), Expect = 4.8e-15 Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Lag0028587 vs. TAIR 10
Match: AT1G13220.2 (nuclear matrix constituent protein-related ) HSP 1 Score: 79.3 bits (194), Expect = 4.8e-15 Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Lag0028587 vs. TAIR 10
Match: AT1G67230.1 (little nuclei1 ) HSP 1 Score: 77.8 bits (190), Expect = 1.4e-14 Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 0
BLAST of Lag0028587 vs. TAIR 10
Match: AT1G68790.1 (little nuclei3 ) HSP 1 Score: 71.6 bits (174), Expect = 1.0e-12 Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 0
BLAST of Lag0028587 vs. TAIR 10
Match: AT5G65770.1 (little nuclei4 ) HSP 1 Score: 60.1 bits (144), Expect = 3.0e-09 Identity = 29/72 (40.28%), Postives = 49/72 (68.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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