Lag0028563 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0028563
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Transposon Tf2-1 polyprotein isoform X1
Location	chr8: 25047150 .. 25047983 (-)
RNA-Seq Expression	Lag0028563
Synteny	Lag0028563

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACAAAAGAAGATGGAGGAGCGTTTCGACGCTAACGAGAGAGAAATGTCTGACATGAAGGCGGGAATTGAGGAGGGCATGAAGGATGTTCGTAAGGTGCTTGCTGCTATGGCGGTGGAAATCGCACTGCTCCGGCGACCCGAGCCCTCAGGGGTCACGGACAGTTCTGTTCACAAACAAAAGGAAAAAGTGGAAACGAGCGAGCATTCCGGCTCTCACGATCATGGGGAGGACAGCACCAGTGACAGACACAAGTTTAAGAAGGTCGAGATGCCAGTGTTCAGGGGAGATGAGCCCGACAATTGGTTGTTCCGTGCTTACAGGTATTTTCAAATTCATAAACTCTCTGATATTGAAAAGTTAACGGTGGCTGTGATAAGTCTTGAAGGAGTTGCGCTTAATTGGTATCGTTCGAAAGAGAAGCGGGAACCGTTTAAAGATTGGCGAGATTTGAAACTTCGGTTGCTTGAGAGGTTTCGTAAGAAAAAGGATGGTGGGGATGTGTGTGGCCAATTCTTGGCTGTCAAGCAAGATTCTACTGTGCAGAAGTATTGTGAGACTTTTGAGCGGTTGGTGGCGTCGTTGCCGCATTTAACGGATGAGGTCCTTGAAAACACTTTTATGAACGGTTTGAAGCCAGTGATGCAAGCAGAAGTTCGTTGTTTTCGTCTGGTTGGTTTGGATGATATGATGGAAAAAGCTCAGTTAGTTGAAGATCGTGAAACCACTAAGGACGAAGAAGGGGTGGTTATCACGGCCCGACCCAAACCAGCGTATGAGGCCAAGGTGGGCTGGCTTTGGGCTGCGACGAGAAACTCCCAAGCCCACTGA

mRNA sequence

ATGACACAAAAGAAGATGGAGGAGCGTTTCGACGCTAACGAGAGAGAAATGTCTGACATGAAGGCGGGAATTGAGGAGGGCATGAAGGATGTTCGTAAGGTGCTTGCTGCTATGGCGGTGGAAATCGCACTGCTCCGGCGACCCGAGCCCTCAGGGGTCACGGACAGTTCTGTTCACAAACAAAAGGAAAAAGTGGAAACGAGCGAGCATTCCGGCTCTCACGATCATGGGGAGGACAGCACCAGTGACAGACACAAGTTTAAGAAGGTCGAGATGCCAGTGTTCAGGGGAGATGAGCCCGACAATTGGTTGTTCCGTGCTTACAGGTATTTTCAAATTCATAAACTCTCTGATATTGAAAAGTTAACGGTGGCTGTGATAAGTCTTGAAGGAGTTGCGCTTAATTGGTATCGTTCGAAAGAGAAGCGGGAACCGTTTAAAGATTGGCGAGATTTGAAACTTCGGTTGCTTGAGAGGTTTCGTAAGAAAAAGGATGGTGGGGATGTGTGTGGCCAATTCTTGGCTGTCAAGCAAGATTCTACTGTGCAGAAGTATTGTGAGACTTTTGAGCGGTTGGTGGCGTCGTTGCCGCATTTAACGGATGAGGTCCTTGAAAACACTTTTATGAACGGTTTGAAGCCAGTGATGCAAGCAGAAGTTCGTTGTTTTCGTCTGGTTGGTTTGGATGATATGATGGAAAAAGCTCAGTTAGTTGAAGATCGTGAAACCACTAAGGACGAAGAAGGGGTGGTTATCACGGCCCGACCCAAACCAGCGTATGAGGCCAAGGTGGGCTGGCTTTGGGCTGCGACGAGAAACTCCCAAGCCCACTGA

Coding sequence (CDS)

ATGACACAAAAGAAGATGGAGGAGCGTTTCGACGCTAACGAGAGAGAAATGTCTGACATGAAGGCGGGAATTGAGGAGGGCATGAAGGATGTTCGTAAGGTGCTTGCTGCTATGGCGGTGGAAATCGCACTGCTCCGGCGACCCGAGCCCTCAGGGGTCACGGACAGTTCTGTTCACAAACAAAAGGAAAAAGTGGAAACGAGCGAGCATTCCGGCTCTCACGATCATGGGGAGGACAGCACCAGTGACAGACACAAGTTTAAGAAGGTCGAGATGCCAGTGTTCAGGGGAGATGAGCCCGACAATTGGTTGTTCCGTGCTTACAGGTATTTTCAAATTCATAAACTCTCTGATATTGAAAAGTTAACGGTGGCTGTGATAAGTCTTGAAGGAGTTGCGCTTAATTGGTATCGTTCGAAAGAGAAGCGGGAACCGTTTAAAGATTGGCGAGATTTGAAACTTCGGTTGCTTGAGAGGTTTCGTAAGAAAAAGGATGGTGGGGATGTGTGTGGCCAATTCTTGGCTGTCAAGCAAGATTCTACTGTGCAGAAGTATTGTGAGACTTTTGAGCGGTTGGTGGCGTCGTTGCCGCATTTAACGGATGAGGTCCTTGAAAACACTTTTATGAACGGTTTGAAGCCAGTGATGCAAGCAGAAGTTCGTTGTTTTCGTCTGGTTGGTTTGGATGATATGATGGAAAAAGCTCAGTTAGTTGAAGATCGTGAAACCACTAAGGACGAAGAAGGGGTGGTTATCACGGCCCGACCCAAACCAGCGTATGAGGCCAAGGTGGGCTGGCTTTGGGCTGCGACGAGAAACTCCCAAGCCCACTGA

Protein sequence

MTQKKMEERFDANEREMSDMKAGIEEGMKDVRKVLAAMAVEIALLRRPEPSGVTDSSVHKQKEKVETSEHSGSHDHGEDSTSDRHKFKKVEMPVFRGDEPDNWLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKREPFKDWRDLKLRLLERFRKKKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLPHLTDEVLENTFMNGLKPVMQAEVRCFRLVGLDDMMEKAQLVEDRETTKDEEGVVITARPKPAYEAKVGWLWAATRNSQAH

Homology

[Close]

BLAST of Lag0028563 vs. NCBI nr
Match: KAA0037013.1 (peroxidase 64 [Cucumis melo var. makuwa] >TYK06637.1 peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-47
Identity = 108/197 (54.82%), Postives = 139/197 (70.56%), Query Frame = 0


Query: 78  EDSTSDRHKFKKVEMPVFRGDEPDNWLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWY 137
           E++ +DR+KFKKVEMPVF G++PD+WLFRA RYFQIHKLSD EK+ V+ IS +G ALNWY
Sbjct: 62  EEAAADRNKFKKVEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKMLVSTISFDGPALNWY 121

Query: 138 RSKEKREPFKDWRDLKLRLLERFRKKKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLP 197
           RS+E+RE F  W +LK RLL RFR  +D G + G+FL VKQ+STV  Y   F++LVA L 
Sbjct: 122 RSQEEREKFTSWSNLKERLLVRFRSSRD-GTILGKFLRVKQESTVDDYRNLFDKLVAPLS 181

Query: 198 HLTDEVLENTFMNGLKPVMQAEVRCFRLVGLDDMMEKAQLVEDRETTKDEEGVVITARPK 257
            + D V+E+TFMNGL P ++AEV   R  GL +MME AQLVE+RE  ++E  +   A  K
Sbjct: 182 DVPDPVIEDTFMNGLFPWIRAEVILCRPKGLAEMMEFAQLVENREIVRNEANLNNLASGK 241

Query: 258 PAYEAKVGWLWAATRNS 275
             Y+  V    +A  NS
Sbjct: 242 --YQNTVNNRTSANTNS 255

[Close]

BLAST of Lag0028563 vs. NCBI nr
Match: KAA0060677.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 6.4e-47
Identity = 115/213 (53.99%), Postives = 142/213 (66.67%), Query Frame = 0


Query: 47  RPEPSGVTDSSVHKQKEKVETSE------HSGSHDHG------EDSTSDRHKFKKVEMPV 106
           R E      S  +K KEK   S        S S D        E++T+DR+KFKKVEMPV
Sbjct: 19  RNEEPNAHMSVTNKGKEKEANSSKSAVLGRSNSDDRNEGKTETEEATADRNKFKKVEMPV 78

Query: 107 FRGDEPDNWLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKREPFKDWRDLKL 166
           F G++PD+WLFRA RYFQIHKLSD EK+ V+ IS +  ALNWYRS+E+RE F  W +LK 
Sbjct: 79  FAGEDPDSWLFRAERYFQIHKLSDSEKMLVSTISFDDPALNWYRSQEEREKFTSWANLKE 138

Query: 167 RLLERFRKKKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLPHLTDEVLENTFMNGLKP 226
           RLL RFR  +D G V G FL VKQ+STV  Y   F++LVA L  + D V+E+TFMNGL P
Sbjct: 139 RLLVRFRSSRD-GTVLGLFLRVKQESTVDDYRNLFDKLVAPLSDVPDPVVEDTFMNGLFP 198

Query: 227 VMQAEVRCFRLVGLDDMMEKAQLVEDRETTKDE 248
            ++AEVR  RL GL +MME AQLVE+RE  ++E
Sbjct: 199 WIRAEVRICRLKGLAEMMEFAQLVENREIERNE 230

[Close]

BLAST of Lag0028563 vs. NCBI nr
Match: KAA0034982.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK02324.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-46
Identity = 116/268 (43.28%), Postives = 172/268 (64.18%), Query Frame = 0


Query: 4   KKMEERFDANEREMSDMKAGIE-------EGMKDVRKV------------LAAMAVEIAL 63
           KK EERF+A E+E+ +++  ++       +  K + K+            L    +E  +
Sbjct: 3   KKAEERFEAIEQEIINIQTELQRIPMLEAKITKHLEKIDSQNEQNQHQQQLILQHIE-GM 62

Query: 64  LRRPEPSGVTDSSVHKQKEKVETSEHSGSHD--HGEDSTSDRHKFKKVEMPVFRGDEPDN 123
           ++    +  ++ S  K K KV    + G+ +  +GE+  +DR KFKKVEM VF G++PD 
Sbjct: 63  MKGQSTTRESERSTSKAKTKVTEPINEGNENEKNGEEKNNDRSKFKKVEMLVFNGEDPDA 122

Query: 124 WLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKREPFKDWRDLKLRLLERFRK 183
           WLFRA RYFQIH L+D +K+TVA IS EG ALNWYR++E+R+ FKDW +LK RLL RFR 
Sbjct: 123 WLFRADRYFQIHMLTDSKKMTVATISFEGPALNWYRAQEERDKFKDWANLKERLLVRFRS 182

Query: 184 KKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLPHLTDEVLENTFMNGLKPVMQAEVRC 243
            ++ G +CGQFL ++Q+S+V++Y   F+RL+A +  L D V+E TFM GL P ++AEV  
Sbjct: 183 TRE-GSICGQFLRIQQESSVEEYRNKFDRLMAPVSDLPDRVIEETFMGGLFPWIKAEVEF 242

Query: 244 FRLVGLDDMMEKAQLVEDRETTKDEEGV 251
            R +GL +MM  AQL+E+RE  ++E G+
Sbjct: 243 CRPIGLAEMMLLAQLMENREKIRNEAGL 268

[Close]

BLAST of Lag0028563 vs. NCBI nr
Match: KAA0032309.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 194.9 bits (494), Expect = 9.2e-46
Identity = 126/284 (44.37%), Postives = 170/284 (59.86%), Query Frame = 0


Query: 1   MTQKKMEERFDANEREMSDMKAGI------EEGMKDVRKVLAAMAV------EIALL--- 60
           M Q ++EER +  ++E++ +K  +      E  + D+ K +  M        ++ L+   
Sbjct: 1   MVQTRIEERLEVMDQEIALIKKELGKMPTMELTLNDIAKNMQTMRTQSNKQEQMMLMIME 60

Query: 61  -----------RRPEPS---GVTDSSVHKQ--KEKVETSEHSGSHDHGEDST------SD 120
                      R  EP+    VT+    K+    K   S  S S D  E  T      +D
Sbjct: 61  TIAKDRTTTSERNEEPNAHMSVTNKGKEKEANSSKSAVSGRSNSDDRNEGKTEIEEAAAD 120

Query: 121 RHKFKKVEMPVFRGDEPDNWLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKR 180
           R+KFKKVEMPVF G++PD+WLFRA RYFQIHKLSD EK+ V+ IS +  ALNWYRS+E+R
Sbjct: 121 RNKFKKVEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKMLVSTISFDDPALNWYRSQEER 180

Query: 181 EPFKDWRDLKLRLLERFRKKKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLPHLTDEV 240
           E F  W +LK+RLL RFR  +D G V G+FL VKQ+STV  Y   F++LVA L  + D V
Sbjct: 181 EKFTSWVNLKIRLLVRFRSSRD-GTVLGRFLRVKQESTVDDYRNLFDKLVAPLSDVPDPV 240

Query: 241 LENTFMNGLKPVMQAEVRCFRLVGLDDMMEKAQLVEDRETTKDE 248
           +E+TFMNGL P ++AEVR  R  GL +MME AQLVE+RE  ++E
Sbjct: 241 VEDTFMNGLFPWIRAEVRTCRPKGLAEMMEFAQLVENREIERNE 283

[Close]

BLAST of Lag0028563 vs. NCBI nr
Match: KAA0066460.1 (uncharacterized protein E6C27_scaffold21G005610 [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-45
Identity = 116/265 (43.77%), Postives = 168/265 (63.40%), Query Frame = 0


Query: 1   MTQKKMEERFDANEREMSDMKAGIEEGMKDVRKVLAAMAVEIALLRRPEPSGVTDSSVHK 60
           M   ++EER D  ++E+S MK  I + +  +   L  ++  + +L        T+S+ HK
Sbjct: 1   MVHTRIEERLDQMDQEISTMKKEISK-LSTMESSLNEISKNLLILMETIADKTTESATHK 60

Query: 61  Q-----KEKVETSEHS-------------GSHDHGEDSTSDRHKFKKVEMPVFRGDEPDN 120
                 KEK  ++  S             G  D+ E +T DR KFKKVEMPVF G++PD+
Sbjct: 61  SATDKGKEKEASTSKSTEITRNAEEGRVDGKADNDEPAT-DRSKFKKVEMPVFSGEDPDS 120

Query: 121 WLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKREPFKDWRDLKLRLLERFRK 180
           WLFRA RYFQIHKL++ EK+ V+ IS +G  LNWYRS+E+R+ F  W +LK RLL RFR 
Sbjct: 121 WLFRAERYFQIHKLTESEKMLVSTISFDGPTLNWYRSQEERDKFLSWGNLKERLLIRFRS 180

Query: 181 KKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLPHLTDEVLENTFMNGLKPVMQAEVRC 240
             D G V G+FL ++Q+S+V++Y   F++LVA L  + ++V+E+TFMNGL P ++AEV C
Sbjct: 181 SLD-GTVLGKFLRIQQESSVEEYRNLFDKLVAPLSDIPEKVVEDTFMNGLLPWIRAEVFC 240

Query: 241 FRLVGLDDMMEKAQLVEDRETTKDE 248
            R  GL +MM+ AQLVE++E  ++E
Sbjct: 241 GRPKGLAEMMQIAQLVENKEFAQNE 262

[Close]

BLAST of Lag0028563 vs. ExPASy TrEMBL
Match: A0A5D3C468 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001150 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-47
Identity = 108/197 (54.82%), Postives = 139/197 (70.56%), Query Frame = 0


Query: 78  EDSTSDRHKFKKVEMPVFRGDEPDNWLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWY 137
           E++ +DR+KFKKVEMPVF G++PD+WLFRA RYFQIHKLSD EK+ V+ IS +G ALNWY
Sbjct: 62  EEAAADRNKFKKVEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKMLVSTISFDGPALNWY 121

Query: 138 RSKEKREPFKDWRDLKLRLLERFRKKKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLP 197
           RS+E+RE F  W +LK RLL RFR  +D G + G+FL VKQ+STV  Y   F++LVA L 
Sbjct: 122 RSQEEREKFTSWSNLKERLLVRFRSSRD-GTILGKFLRVKQESTVDDYRNLFDKLVAPLS 181

Query: 198 HLTDEVLENTFMNGLKPVMQAEVRCFRLVGLDDMMEKAQLVEDRETTKDEEGVVITARPK 257
            + D V+E+TFMNGL P ++AEV   R  GL +MME AQLVE+RE  ++E  +   A  K
Sbjct: 182 DVPDPVIEDTFMNGLFPWIRAEVILCRPKGLAEMMEFAQLVENREIVRNEANLNNLASGK 241

Query: 258 PAYEAKVGWLWAATRNS 275
             Y+  V    +A  NS
Sbjct: 242 --YQNTVNNRTSANTNS 255

[Close]

BLAST of Lag0028563 vs. ExPASy TrEMBL
Match: A0A5A7V1H3 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005740 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.1e-47
Identity = 115/213 (53.99%), Postives = 142/213 (66.67%), Query Frame = 0


Query: 47  RPEPSGVTDSSVHKQKEKVETSE------HSGSHDHG------EDSTSDRHKFKKVEMPV 106
           R E      S  +K KEK   S        S S D        E++T+DR+KFKKVEMPV
Sbjct: 19  RNEEPNAHMSVTNKGKEKEANSSKSAVLGRSNSDDRNEGKTETEEATADRNKFKKVEMPV 78

Query: 107 FRGDEPDNWLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKREPFKDWRDLKL 166
           F G++PD+WLFRA RYFQIHKLSD EK+ V+ IS +  ALNWYRS+E+RE F  W +LK 
Sbjct: 79  FAGEDPDSWLFRAERYFQIHKLSDSEKMLVSTISFDDPALNWYRSQEEREKFTSWANLKE 138

Query: 167 RLLERFRKKKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLPHLTDEVLENTFMNGLKP 226
           RLL RFR  +D G V G FL VKQ+STV  Y   F++LVA L  + D V+E+TFMNGL P
Sbjct: 139 RLLVRFRSSRD-GTVLGLFLRVKQESTVDDYRNLFDKLVAPLSDVPDPVVEDTFMNGLFP 198

Query: 227 VMQAEVRCFRLVGLDDMMEKAQLVEDRETTKDE 248
            ++AEVR  RL GL +MME AQLVE+RE  ++E
Sbjct: 199 WIRAEVRICRLKGLAEMMEFAQLVENREIERNE 230

[Close]

BLAST of Lag0028563 vs. ExPASy TrEMBL
Match: A0A5D3BT54 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00110 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 6.9e-47
Identity = 116/268 (43.28%), Postives = 172/268 (64.18%), Query Frame = 0


Query: 4   KKMEERFDANEREMSDMKAGIE-------EGMKDVRKV------------LAAMAVEIAL 63
           KK EERF+A E+E+ +++  ++       +  K + K+            L    +E  +
Sbjct: 3   KKAEERFEAIEQEIINIQTELQRIPMLEAKITKHLEKIDSQNEQNQHQQQLILQHIE-GM 62

Query: 64  LRRPEPSGVTDSSVHKQKEKVETSEHSGSHD--HGEDSTSDRHKFKKVEMPVFRGDEPDN 123
           ++    +  ++ S  K K KV    + G+ +  +GE+  +DR KFKKVEM VF G++PD 
Sbjct: 63  MKGQSTTRESERSTSKAKTKVTEPINEGNENEKNGEEKNNDRSKFKKVEMLVFNGEDPDA 122

Query: 124 WLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKREPFKDWRDLKLRLLERFRK 183
           WLFRA RYFQIH L+D +K+TVA IS EG ALNWYR++E+R+ FKDW +LK RLL RFR 
Sbjct: 123 WLFRADRYFQIHMLTDSKKMTVATISFEGPALNWYRAQEERDKFKDWANLKERLLVRFRS 182

Query: 184 KKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLPHLTDEVLENTFMNGLKPVMQAEVRC 243
            ++ G +CGQFL ++Q+S+V++Y   F+RL+A +  L D V+E TFM GL P ++AEV  
Sbjct: 183 TRE-GSICGQFLRIQQESSVEEYRNKFDRLMAPVSDLPDRVIEETFMGGLFPWIKAEVEF 242

Query: 244 FRLVGLDDMMEKAQLVEDRETTKDEEGV 251
            R +GL +MM  AQL+E+RE  ++E G+
Sbjct: 243 CRPIGLAEMMLLAQLMENREKIRNEAGL 268

[Close]

BLAST of Lag0028563 vs. ExPASy TrEMBL
Match: A0A5A7SSU9 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001620 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 4.5e-46
Identity = 126/284 (44.37%), Postives = 170/284 (59.86%), Query Frame = 0


Query: 1   MTQKKMEERFDANEREMSDMKAGI------EEGMKDVRKVLAAMAV------EIALL--- 60
           M Q ++EER +  ++E++ +K  +      E  + D+ K +  M        ++ L+   
Sbjct: 1   MVQTRIEERLEVMDQEIALIKKELGKMPTMELTLNDIAKNMQTMRTQSNKQEQMMLMIME 60

Query: 61  -----------RRPEPS---GVTDSSVHKQ--KEKVETSEHSGSHDHGEDST------SD 120
                      R  EP+    VT+    K+    K   S  S S D  E  T      +D
Sbjct: 61  TIAKDRTTTSERNEEPNAHMSVTNKGKEKEANSSKSAVSGRSNSDDRNEGKTEIEEAAAD 120

Query: 121 RHKFKKVEMPVFRGDEPDNWLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKR 180
           R+KFKKVEMPVF G++PD+WLFRA RYFQIHKLSD EK+ V+ IS +  ALNWYRS+E+R
Sbjct: 121 RNKFKKVEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKMLVSTISFDDPALNWYRSQEER 180

Query: 181 EPFKDWRDLKLRLLERFRKKKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLPHLTDEV 240
           E F  W +LK+RLL RFR  +D G V G+FL VKQ+STV  Y   F++LVA L  + D V
Sbjct: 181 EKFTSWVNLKIRLLVRFRSSRD-GTVLGRFLRVKQESTVDDYRNLFDKLVAPLSDVPDPV 240

Query: 241 LENTFMNGLKPVMQAEVRCFRLVGLDDMMEKAQLVEDRETTKDE 248
           +E+TFMNGL P ++AEVR  R  GL +MME AQLVE+RE  ++E
Sbjct: 241 VEDTFMNGLFPWIRAEVRTCRPKGLAEMMEFAQLVENREIERNE 283

[Close]

BLAST of Lag0028563 vs. ExPASy TrEMBL
Match: A0A5A7VH17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005610 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 7.6e-46
Identity = 116/265 (43.77%), Postives = 168/265 (63.40%), Query Frame = 0


Query: 1   MTQKKMEERFDANEREMSDMKAGIEEGMKDVRKVLAAMAVEIALLRRPEPSGVTDSSVHK 60
           M   ++EER D  ++E+S MK  I + +  +   L  ++  + +L        T+S+ HK
Sbjct: 1   MVHTRIEERLDQMDQEISTMKKEISK-LSTMESSLNEISKNLLILMETIADKTTESATHK 60

Query: 61  Q-----KEKVETSEHS-------------GSHDHGEDSTSDRHKFKKVEMPVFRGDEPDN 120
                 KEK  ++  S             G  D+ E +T DR KFKKVEMPVF G++PD+
Sbjct: 61  SATDKGKEKEASTSKSTEITRNAEEGRVDGKADNDEPAT-DRSKFKKVEMPVFSGEDPDS 120

Query: 121 WLFRAYRYFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKREPFKDWRDLKLRLLERFRK 180
           WLFRA RYFQIHKL++ EK+ V+ IS +G  LNWYRS+E+R+ F  W +LK RLL RFR 
Sbjct: 121 WLFRAERYFQIHKLTESEKMLVSTISFDGPTLNWYRSQEERDKFLSWGNLKERLLIRFRS 180

Query: 181 KKDGGDVCGQFLAVKQDSTVQKYCETFERLVASLPHLTDEVLENTFMNGLKPVMQAEVRC 240
             D G V G+FL ++Q+S+V++Y   F++LVA L  + ++V+E+TFMNGL P ++AEV C
Sbjct: 181 SLD-GTVLGKFLRIQQESSVEEYRNLFDKLVAPLSDIPEKVVEDTFMNGLLPWIRAEVFC 240

Query: 241 FRLVGLDDMMEKAQLVEDRETTKDE 248
            R  GL +MM+ AQLVE++E  ++E
Sbjct: 241 GRPKGLAEMMQIAQLVENKEFAQNE 262

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BLAST of Lag0028563 vs. TAIR 10
Match: AT1G67020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 4.3e-09
Identity = 49/174 (28.16%), Postives = 80/174 (45.98%), Query Frame = 0


Query: 2   TQKKMEERFDANEREMSDMKAGIEEGMKDVRKVLAAMAVEIALLRRPEPSGVTDSSVHKQ 61
           T++ M+  F   +R  +D K   EE ++ +  VL  +   +A L R E          ++
Sbjct: 20  TERNMKVLFGGFKRLCAD-KVQHEEKLESMDSVLRQV---VATLERME---------IRE 79

Query: 62  KEKVETSEHSGSHDHGEDSTSDRHK---------------FKKVEMPVFRGDEPDNWLFR 121
            ++VE  EHS        S+S   +                +++EMPVF G     W  +
Sbjct: 80  GKRVEQGEHSCQSPRHSFSSSMPQRGAGESPILLDNRSSLIRRIEMPVFDGSGVYEWFSK 139

Query: 122 AYRYFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKREPFKDWRDLKLRLLERF 161
             R+F++ +  D +KL +  +SLEGVAL W+  +     F+DW   + RLL RF
Sbjct: 140 VERFFRVGRYQDSDKLDLVALSLEGVALKWFLREMSTLEFRDWNSFEQRLLARF 180

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BLAST of Lag0028563 vs. TAIR 10
Match: AT3G42723.1 (aminoacyl-tRNA ligases;ATP binding;nucleotide binding )

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-08
Identity = 36/131 (27.48%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 110 YFQIHKLSDIEKLTVAVISLEGVALNWYRSKEKREPFKDWRDLKLRLLERFRKKKDGGDV 169
           YF  + + + E+L +   +LEG    W +   K+     W++ K  ++ R  K     + 
Sbjct: 281 YFGENNIPEQERLQIVYSNLEGDIGQWIKHLWKKNSPTSWKEFKC-MMARETKTTMKVNH 340

Query: 170 CGQFLAVKQDSTVQKYCETFERLVASLPHLTDEVLENTFMNGLKPVMQAEVRCFRLVGLD 229
              +  ++Q+ +V++Y E FE L      L  + LE  F+ GL+P +Q  VR  +  G+ 
Sbjct: 341 QPHYSGIQQEGSVREYRERFEALCLGSVILPGQGLEALFLQGLQPSLQTAVRELKPNGIV 400

Query: 230 DMMEKAQLVED 241
            MM+ AQ +E+
Sbjct: 401 QMMDTAQWLEE 410

The following BLAST results are available for this feature:

BLAST of Lag0028563 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037013.1	3.7e-47	54.82	peroxidase 64 [Cucumis melo var. makuwa] >TYK06637.1 peroxidase 64 [Cucumis melo...	[more]
KAA0060677.1	6.4e-47	53.99	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0034982.1	1.4e-46	43.28	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK02324.1 t...	[more]
KAA0032309.1	9.2e-46	44.37	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0066460.1	1.6e-45	43.77	uncharacterized protein E6C27_scaffold21G005610 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0028563 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0028563 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C468	1.8e-47	54.82	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001150...	[more]
A0A5A7V1H3	3.1e-47	53.99	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BT54	6.9e-47	43.28	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SSU9	4.5e-46	44.37	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7VH17	7.6e-46	43.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lag0028563 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67020.1	4.3e-09	28.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G42723.1	2.8e-08	27.48	aminoacyl-tRNA ligases;ATP binding;nucleotide binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 124..214 e-value: 5.1E-16 score: 58.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..85
None	No IPR available	PANTHER	PTHR34482:SF20	SUBFAMILY NOT NAMED	coord: 68..247
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 68..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0028563.1	Lag0028563.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process