Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCTTCGTGGAGTTCGGCTCCCATGTAGGCGATGAAAATTCTCATTTTCCCTTTTTAAAAGATTTACTCTTTAAATAAGTTTCTTCTGAGATTGACTTTTTAAAATTTCCCTCTACTTAAGGGTTTTCTCTCTACTTGAGAGACGGTGGGTTTTTGAGTGGTGTGACGGCGGGTGAGTTGACGAAGGTTTTGGCGGCAGTGTGTGAGTTAGTGAGTGACGGGTCCGGCGAGGGTGTGATCATGGTTCCGAGACGATGGATGAATTATTGTCACGTTGGAAGGATTTTTCGCTAACGAAAAAGAAGGAAAGGTCATTGCGGCCAGCGATCCAATAATTTTACTGGCGGCTGAAAATATCCAATTGTGTGCTGTGGCAAAAGTGTTGAATGATAAATATACCAATGTGGATGCCTTTGCTTCTGTGATAAAGTCGGTTTGGAAGGTTCATCAGGGTACAAGGACTGAGTCAGCTGGTAGCAATATTTTCTATATAAAATTCAAATCTCAAAGCGAGAAGGAGAGAGTGATAGGCTCGGGTCCATGGATTTTCGATAAGGCTATGATTGTTATGGTTTCTCCCAGTGAGAATGATCAAGTTGTGGATTTGGCTTTCACTAAGGCAAGCTTTTGGATTCAGATACATAATGTTCCTTTCAATTGCTTGTCTGTAGGGATGGCTAGAATCTGGGGGGGTGAGGTGGGAGAAATGGTAGAAGTTGACTGGGATGGTCAAAGTGCGTGGTCGGTTATGAGAGTGAGAGTGATTGTGGATATCGAGAGTCCATTGCAAAGAGGGGTGACAATGAGGAATAAGGAGGGGAAAGTGATTTGGTGCCCAATCCAATATGAGAAACTGCCTGATTTCTGTTTTAATTATGGAGTAATTGGCCATTCTTTTCGGGCATGTAAACAAGAGGTTTTGAAGGAGGATGGGCAGCTCCAGTATGGAGATTGGTTGAGAGCGGTGCTAATAAGGAAGTGGAGTTTTAAGGGGGCTGAGGAGCGGGAGGTTAGGAGGGATGAAGAGAGGTTAGGGGGAGGGATGAAAAGGGTAGGAGTGATGGGGAGAGATGGAGAAATGACATAGGGGAGGGGCAGGAGCCGAGCGGCTTGCAGGGGGCAGTAGAGAGTGAGGTTGGGGAGGAGGTTGTGGAGGGGGTAAGGAAGGGGTTGGGGGTTCTGGTACAAATAAACCTTTAGCGCAGGAGAAGGTACATTCAGCGGAGGGAGGTGGGAAAGGGAAAGGGGTTCTAAAGGAGGAGAAATTGGAGGAGATGGAGGTGGAGGTCGAAAGGGAAGGGGTTGGGGTGGGTTCAGCGGGGATAAAAATAGAGGAAGGGGGGAAAGGGAGTGAAGAGGTCATGGAAGAGAATGACCCGGCAGAGGATGGAGGTTGGAGGGGATATGGCATGGGATGGGAAAGGGAAGAAGAGATCTTTAGAGGATGA
mRNA sequence
ATGTTCCTTCGTGGAGTTCGGCTCCCATGGTTTTCTCTCTACTTGAGAGACGGTGGGTTTTTGAGTGGTGTGACGGCGGGATTTTTCGCTAACGAAAAAGAAGGAAAGGTCATTGCGGCCAGCGATCCAATAATTTTACTGGCGGCTGAAAATATCCAATTGTGTGCTGTGGCAAAAGTGTTGAATGATAAATATACCAATGTGGATGCCTTTGCTTCTGTGATAAAGTCGGTTTGGAAGGTTCATCAGGGTACAAGGACTGAGTCAGCTGGTAGCAATATTTTCTATATAAAATTCAAATCTCAAAGCGAGAAGGAGAGAGTGATAGGCTCGGGTCCATGGATTTTCGATAAGGCTATGATTGTTATGGTTTCTCCCAGTGAGAATGATCAAGTTGTGGATTTGGCTTTCACTAAGGCAAGCTTTTGGATTCAGATACATAATGTTCCTTTCAATTGCTTGTCTGTAGGGATGGCTAGAATCTGGGGGGGTGAGGTGGGAGAAATGGTAGAAGTTGACTGGGATGGTCAAAGTGCGTGGTCGGTTATGAGAGTGAGAGTGATTGTGGATATCGAGAGTCCATTGCAAAGAGGGGTGACAATGAGGAATAAGGAGGGGAAAGTGATTTGGTGCCCAATCCAATATGAGAAACTGCCTGATTTCTGTTTTAATTATGGAGTAATTGGCCATTCTTTTCGGGCATGTAAACAAGAGGTTTTGAAGGAGGATGGGCAGCTCCAGTATGGAGATTGGTTGAGAGCGGTGCTAATAAGGAAGTGGAGTTTTAAGGGGGCTGAGGAGCGGGAGGTTAGGAGGGATGAAGAGAGGTTAGGGGGAGGGATGAAAAGGGAGAAGGTACATTCAGCGGAGGGAGGTGGGAAAGGGAAAGGGGTTCTAAAGGAGGAGAAATTGGAGGAGATGGAGGTGGAGGTCGAAAGGGAAGGGGTTGGGGTGGGTTCAGCGGGGATAAAAATAGAGGAAGGGGGGAAAGGGAGTGAAGAGGTCATGGAAGAGAATGACCCGGCAGAGGATGGAGGTTGGAGGGGATATGGCATGGGATGGGAAAGGGAAGAAGAGATCTTTAGAGGATGA
Coding sequence (CDS)
ATGTTCCTTCGTGGAGTTCGGCTCCCATGGTTTTCTCTCTACTTGAGAGACGGTGGGTTTTTGAGTGGTGTGACGGCGGGATTTTTCGCTAACGAAAAAGAAGGAAAGGTCATTGCGGCCAGCGATCCAATAATTTTACTGGCGGCTGAAAATATCCAATTGTGTGCTGTGGCAAAAGTGTTGAATGATAAATATACCAATGTGGATGCCTTTGCTTCTGTGATAAAGTCGGTTTGGAAGGTTCATCAGGGTACAAGGACTGAGTCAGCTGGTAGCAATATTTTCTATATAAAATTCAAATCTCAAAGCGAGAAGGAGAGAGTGATAGGCTCGGGTCCATGGATTTTCGATAAGGCTATGATTGTTATGGTTTCTCCCAGTGAGAATGATCAAGTTGTGGATTTGGCTTTCACTAAGGCAAGCTTTTGGATTCAGATACATAATGTTCCTTTCAATTGCTTGTCTGTAGGGATGGCTAGAATCTGGGGGGGTGAGGTGGGAGAAATGGTAGAAGTTGACTGGGATGGTCAAAGTGCGTGGTCGGTTATGAGAGTGAGAGTGATTGTGGATATCGAGAGTCCATTGCAAAGAGGGGTGACAATGAGGAATAAGGAGGGGAAAGTGATTTGGTGCCCAATCCAATATGAGAAACTGCCTGATTTCTGTTTTAATTATGGAGTAATTGGCCATTCTTTTCGGGCATGTAAACAAGAGGTTTTGAAGGAGGATGGGCAGCTCCAGTATGGAGATTGGTTGAGAGCGGTGCTAATAAGGAAGTGGAGTTTTAAGGGGGCTGAGGAGCGGGAGGTTAGGAGGGATGAAGAGAGGTTAGGGGGAGGGATGAAAAGGGAGAAGGTACATTCAGCGGAGGGAGGTGGGAAAGGGAAAGGGGTTCTAAAGGAGGAGAAATTGGAGGAGATGGAGGTGGAGGTCGAAAGGGAAGGGGTTGGGGTGGGTTCAGCGGGGATAAAAATAGAGGAAGGGGGGAAAGGGAGTGAAGAGGTCATGGAAGAGAATGACCCGGCAGAGGATGGAGGTTGGAGGGGATATGGCATGGGATGGGAAAGGGAAGAAGAGATCTTTAGAGGATGA
Protein sequence
MFLRGVRLPWFSLYLRDGGFLSGVTAGFFANEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSFRACKQEVLKEDGQLQYGDWLRAVLIRKWSFKGAEEREVRRDEERLGGGMKREKVHSAEGGGKGKGVLKEEKLEEMEVEVEREGVGVGSAGIKIEEGGKGSEEVMEENDPAEDGGWRGYGMGWEREEEIFRG
Homology
BLAST of Lag0028558 vs. NCBI nr
Match:
XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])
HSP 1 Score: 246.1 bits (627), Expect = 4.6e-61
Identity = 126/271 (46.49%), Postives = 174/271 (64.21%), Query Frame = 0
Query: 31 NEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESA 90
+E E I PI L A+N++LC VAK+ K + +A SV+KSVW+VH TR E
Sbjct: 16 DENETVTIDRGKPI--LTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPL 75
Query: 91 GSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVP 150
G NI+ I FKS SEK RV+ SGPW F+K+++V+ SP+ +Q +D+ F +FWIQIHN+P
Sbjct: 76 GMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIP 135
Query: 151 FNCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKV 210
F C+S MA I G ++G++ E++ DG W+ +RVRV +D+ PL+RG+ ++N +GK
Sbjct: 136 FECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKD 195
Query: 211 IWCPIQYEKLPDFCFNYGVIGHSFRACKQ--EVLKEDGQLQYGDWLRAVLIRKWSFKGAE 270
IWCP++YEKLPDFC+ G IGHS R C+Q +V+ + QYGDWLRA L++K S E
Sbjct: 196 IWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKK-SVSHPE 255
Query: 271 EREVRRDEERLGGGMKREKVHSAEGGGKGKG 298
E EV R G G H GG G+G
Sbjct: 256 E-EVFWRGGRFGRG------HQVNGGRGGRG 276
BLAST of Lag0028558 vs. NCBI nr
Match:
XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])
HSP 1 Score: 193.7 bits (491), Expect = 2.7e-45
Identity = 91/206 (44.17%), Postives = 137/206 (66.50%), Query Frame = 0
Query: 32 EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAG 91
E++ VI PI L +NIQLCAV K+ K V+AFASV+K VWK+H TR E+AG
Sbjct: 17 EEDTIVIDNQKPI--LTVDNIQLCAVGKLHPSKRITVEAFASVMKQVWKIHNSTRIETAG 76
Query: 92 SNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPF 151
NI+ I FK+ +EK RV GPW FDK+++++V + ++ +D+ + +FW+QIH + F
Sbjct: 77 LNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDISLCAFWVQIHYITF 136
Query: 152 NCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMR----VRVIVDIESPLQRGVTMRNKEGK 211
C++ MA+ G +GE+ EV DG S++ +R VRV +++ PL+RG+ ++ +GK
Sbjct: 137 ECMTKDMAKFLGARLGEVEEV--DGMSSYDWVRPFLWVRVKINVLKPLRRGLKVKTSDGK 196
Query: 212 VIWCPIQYEKLPDFCFNYGVIGHSFR 234
IWCP++YE+LPDFC+ G +GHS R
Sbjct: 197 DIWCPLRYERLPDFCYGCGCVGHSIR 218
BLAST of Lag0028558 vs. NCBI nr
Match:
XP_022155933.1 (uncharacterized protein LOC111022932 [Momordica charantia])
HSP 1 Score: 171.8 bits (434), Expect = 1.1e-38
Identity = 82/187 (43.85%), Postives = 121/187 (64.71%), Query Frame = 0
Query: 32 EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAG 91
EKE +I S+ L+ EN+Q AV K+ K +V+AF SV+KS+WKVH+ T E+AG
Sbjct: 16 EKEETIIIDSEK-PLMTPENVQRYAVGKLHTSKRISVEAFRSVMKSLWKVHESTHIETAG 75
Query: 92 SNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPF 151
N++ I FKS +EK RV+ SGPW F+ +++V+ SP+ DQ D+ F + WIQIH +PF
Sbjct: 76 MNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNFNFFALWIQIHCIPF 135
Query: 152 NCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKVI 211
C+ MA+ G +GE+ E+D +G W+ +RVRV +DI P +RG+ +R + K
Sbjct: 136 QCMIKDMAKFLGTRIGEVEEIDCNGSYEWTGPFIRVRVQIDISKPFKRGLKVRTGDEKES 195
Query: 212 WCPIQYE 217
WCP++YE
Sbjct: 196 WCPLRYE 201
BLAST of Lag0028558 vs. NCBI nr
Match:
XP_015380691.1 (uncharacterized protein LOC107174364 [Citrus sinensis])
HSP 1 Score: 167.2 bits (422), Expect = 2.7e-37
Identity = 73/205 (35.61%), Postives = 124/205 (60.49%), Query Frame = 0
Query: 55 CAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPW 114
C V KVL + N + F S ++ VW+ + + ES G+N F KF +++K+RV+ GPW
Sbjct: 18 CLVGKVLLTRAVNKEGFKSALQQVWRTVKEVKIESLGNNCFMFKFTEEADKKRVLTGGPW 77
Query: 115 IFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVG--EMVEV 174
FD+A++V+ P ++ +FT +FWIQI NVP C+ + + GG +G E +E
Sbjct: 78 HFDRALLVLTEPKGIGELTKQSFTHTAFWIQIRNVPIACMEKELIQELGGMIGAVEEIET 137
Query: 175 DWDGQSAWSVMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSF 234
D +G+ R+RV+++I PL++ + ++ + I P+ YE+LPDFC+ G+IGH +
Sbjct: 138 DENGECLGEFARIRVLINITLPLKKILFLKQEGESDIQMPVVYERLPDFCYCCGIIGHQY 197
Query: 235 RACKQEVLKEDGQLQYGDWLRAVLI 258
+ C + ++ QL YG W++A++I
Sbjct: 198 KECAKFQGQQKEQLPYGGWMKAIII 222
BLAST of Lag0028558 vs. NCBI nr
Match:
XP_006485824.1 (uncharacterized protein LOC102613298 [Citrus sinensis])
HSP 1 Score: 166.4 bits (420), Expect = 4.6e-37
Identity = 77/202 (38.12%), Postives = 120/202 (59.41%), Query Frame = 0
Query: 55 CAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPW 114
C V K+L + + + ++ W+ + T+ ES G NIF KF S+SEK+R++ GPW
Sbjct: 40 CLVGKILQTRSVPREGLRAAMQQAWRTTKETKVESLGDNIFLFKFASKSEKKRILFGGPW 99
Query: 115 IFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVDW 174
FD++++V++ P V FT A FW+QIHN+P C+ + + GG +G++ EV+
Sbjct: 100 HFDRSLMVVIEPMGIGDVKKQDFTHALFWVQIHNIPIMCMDKEIIQEIGGRIGKVQEVET 159
Query: 175 D--GQSAWSVMRVRVIVDIESPLQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSF 234
D G+ S +RVR++V++ PL + + ++ ++G I I YEKLPDFCF G+IGH F
Sbjct: 160 DDAGECMGSFVRVRIMVNVTRPLPKRLLLKLEDGGQISLRIAYEKLPDFCFCCGLIGHQF 219
Query: 235 RACKQEVLKEDGQLQYGDWLRA 255
R C + L YG W+RA
Sbjct: 220 RECLDYKGQSKDDLTYGAWMRA 241
BLAST of Lag0028558 vs. ExPASy TrEMBL
Match:
A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)
HSP 1 Score: 246.1 bits (627), Expect = 2.2e-61
Identity = 126/271 (46.49%), Postives = 174/271 (64.21%), Query Frame = 0
Query: 31 NEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESA 90
+E E I PI L A+N++LC VAK+ K + +A SV+KSVW+VH TR E
Sbjct: 16 DENETVTIDRGKPI--LTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPL 75
Query: 91 GSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVP 150
G NI+ I FKS SEK RV+ SGPW F+K+++V+ SP+ +Q +D+ F +FWIQIHN+P
Sbjct: 76 GMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIP 135
Query: 151 FNCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKV 210
F C+S MA I G ++G++ E++ DG W+ +RVRV +D+ PL+RG+ ++N +GK
Sbjct: 136 FECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKD 195
Query: 211 IWCPIQYEKLPDFCFNYGVIGHSFRACKQ--EVLKEDGQLQYGDWLRAVLIRKWSFKGAE 270
IWCP++YEKLPDFC+ G IGHS R C+Q +V+ + QYGDWLRA L++K S E
Sbjct: 196 IWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKK-SVSHPE 255
Query: 271 EREVRRDEERLGGGMKREKVHSAEGGGKGKG 298
E EV R G G H GG G+G
Sbjct: 256 E-EVFWRGGRFGRG------HQVNGGRGGRG 276
BLAST of Lag0028558 vs. ExPASy TrEMBL
Match:
A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 1.3e-45
Identity = 91/206 (44.17%), Postives = 137/206 (66.50%), Query Frame = 0
Query: 32 EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAG 91
E++ VI PI L +NIQLCAV K+ K V+AFASV+K VWK+H TR E+AG
Sbjct: 17 EEDTIVIDNQKPI--LTVDNIQLCAVGKLHPSKRITVEAFASVMKQVWKIHNSTRIETAG 76
Query: 92 SNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPF 151
NI+ I FK+ +EK RV GPW FDK+++++V + ++ +D+ + +FW+QIH + F
Sbjct: 77 LNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDISLCAFWVQIHYITF 136
Query: 152 NCLSVGMARIWGGEVGEMVEVDWDGQSAWSVMR----VRVIVDIESPLQRGVTMRNKEGK 211
C++ MA+ G +GE+ EV DG S++ +R VRV +++ PL+RG+ ++ +GK
Sbjct: 137 ECMTKDMAKFLGARLGEVEEV--DGMSSYDWVRPFLWVRVKINVLKPLRRGLKVKTSDGK 196
Query: 212 VIWCPIQYEKLPDFCFNYGVIGHSFR 234
IWCP++YE+LPDFC+ G +GHS R
Sbjct: 197 DIWCPLRYERLPDFCYGCGCVGHSIR 218
BLAST of Lag0028558 vs. ExPASy TrEMBL
Match:
A0A6J1DP89 (uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022932 PE=4 SV=1)
HSP 1 Score: 171.8 bits (434), Expect = 5.3e-39
Identity = 82/187 (43.85%), Postives = 121/187 (64.71%), Query Frame = 0
Query: 32 EKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAG 91
EKE +I S+ L+ EN+Q AV K+ K +V+AF SV+KS+WKVH+ T E+AG
Sbjct: 16 EKEETIIIDSEK-PLMTPENVQRYAVGKLHTSKRISVEAFRSVMKSLWKVHESTHIETAG 75
Query: 92 SNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPF 151
N++ I FKS +EK RV+ SGPW F+ +++V+ SP+ DQ D+ F + WIQIH +PF
Sbjct: 76 MNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNFNFFALWIQIHCIPF 135
Query: 152 NCLSVGMARIWGGEVGEMVEVDWDGQSAWS--VMRVRVIVDIESPLQRGVTMRNKEGKVI 211
C+ MA+ G +GE+ E+D +G W+ +RVRV +DI P +RG+ +R + K
Sbjct: 136 QCMIKDMAKFLGTRIGEVEEIDCNGSYEWTGPFIRVRVQIDISKPFKRGLKVRTGDEKES 195
Query: 212 WCPIQYE 217
WCP++YE
Sbjct: 196 WCPLRYE 201
BLAST of Lag0028558 vs. ExPASy TrEMBL
Match:
A0A5C7IP22 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_005137 PE=4 SV=1)
HSP 1 Score: 163.3 bits (412), Expect = 1.9e-36
Identity = 88/273 (32.23%), Postives = 146/273 (53.48%), Query Frame = 0
Query: 17 DGGFLSGVTAGFFANEKEGKVIAASDPIILLAAENIQLCAVAKVLNDKYTNVDAFASVIK 76
D +S + A K+ K+ + + + ++LC V K+L K+ N +AF +VI
Sbjct: 2 DSEEISRLCASLSIKGKDEKLWSVKGLLQEATGKKLELCLVGKILTRKHVNREAFRAVIP 61
Query: 77 SVWKVHQGTRTESAGSNIFYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLA 136
+W+ + E N+F F++Q ++ RV+ GPW FD ++V+ PS + LA
Sbjct: 62 KIWQTN--LDIEVVQDNVFLFYFRNQDDRLRVLAGGPWCFDNGLLVLERPSGVGNINSLA 121
Query: 137 FTKASFWIQIHNVPFNCLSVGMARIWGGEVGEMVEVD--WDGQSAWSVMRVRVIVDIESP 196
FT+ +FWIQI N P C++ M + G +GE+V++D G+ MR+RVI+D+ P
Sbjct: 122 FTRVAFWIQIINAPLLCMTKEMGKFLGQLIGEVVDMDVGVTGECFGKYMRIRVIIDVSKP 181
Query: 197 LQRGVTMRNKEGKVIWCPIQYEKLPDFCFNYGVIGHSFRACKQEVLKEDGQ------LQY 256
L+R + + ++G+ ++YEKLP+FCF+YG IGHS+ C ++ DG+ +
Sbjct: 182 LKRFLRLELEKGEESMVLLRYEKLPEFCFHYGFIGHSYLEC--NLVSRDGKRDMGSDFDF 241
Query: 257 GDWLRAV-LIRKWSFKGAEEREVRRDEERLGGG 281
G WLRA + W+ + E + LG G
Sbjct: 242 GPWLRASNPLENWTDQPWRTTEGGMADNNLGAG 270
BLAST of Lag0028558 vs. ExPASy TrEMBL
Match:
A0A2P5F130 (Zinc knuckle CX2CX4HX4C OS=Trema orientale OX=63057 GN=TorRG33x02_127580 PE=4 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 3.2e-36
Identity = 84/225 (37.33%), Postives = 128/225 (56.89%), Query Frame = 0
Query: 50 ENIQLCAVAKVLNDKYTNVDAFASVIKSVWKVHQGTRTESAG-SNIFYIKFKSQSEKERV 109
E ++LC V +V +K N ++ + V + VW + R ES G +NIF F +++++RV
Sbjct: 35 EMMELCLVGRVFGNKIVNRESLSDVAEQVWCTSRKVRVESMGVTNIFMFHFGCKADRQRV 94
Query: 110 IGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCLSVGMARIWGGEVGE 169
I GPW F +I ++ P E V + FTK SFWIQ HNVP C S AR+WG +G
Sbjct: 95 ISGGPWNFGNQLISLLKPKEVGLVSSMDFTKVSFWIQFHNVPIVCRSDKCARLWGEVIGP 154
Query: 170 MVEVDWDGQSAWSVMRVRVIVDIESPLQRGV-TMRNKEGKVIWCPIQYEKLPDFCFNYGV 229
+++ D +G + R RVI+D+ P RG+ + + + PIQYE LP+FCF +
Sbjct: 155 VMDTDTEGPT----KRARVIIDVTKP--RGLRVFTDNDSDAVSIPIQYEYLPEFCFGCRI 214
Query: 230 IGHSFRAC-KQEVLKEDGQ---LQYGDWLRAVLIRKWSFKGAEER 269
IGH R C ++E L G+ +YGDWL+A +++W + E +
Sbjct: 215 IGHKLRECPEKEGLVSTGRPRVNRYGDWLKAFNLKQWRKERRERK 253
BLAST of Lag0028558 vs. TAIR 10
Match:
AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 65.9 bits (159), Expect = 7.9e-11
Identity = 43/158 (27.22%), Postives = 76/158 (48.10%), Query Frame = 0
Query: 95 FYIKFKSQSEKERVIGSGPWIFDKAMIVMVSPSENDQVVDLAFTKASFWIQIHNVPFNCL 154
F+ F + E V+ GPW F+ MI++ + + L F FW+QI +PF L
Sbjct: 173 FHFIFTLEESLETVLRRGPWAFNDWMILL---QRWEPQIPL-FPFIPFWVQIRGIPFQFL 232
Query: 155 SVGMARIWGGEVGEMVEVDWDGQSAWSVMRVRVIV--DIESPLQRGVTMRNKEGKVIWCP 214
+ G+ G +G++++ D++ + + RV++ DI PL+ + G
Sbjct: 233 NRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTLLR 292
Query: 215 IQYEKLPDFCFNYGVIGHSFRACKQEVLKEDGQLQYGD 251
+YE+L FC G++ H F AC +++ G+ Q D
Sbjct: 293 FRYERLRGFCEVCGMLTHDFGAC---LIQNGGEEQADD 323
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D765 | 2.2e-61 | 46.49 | uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A6J1DVS4 | 1.3e-45 | 44.17 | uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DP89 | 5.3e-39 | 43.85 | uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A5C7IP22 | 1.9e-36 | 32.23 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_005137 PE=4 SV=1 | [more] |
A0A2P5F130 | 3.2e-36 | 37.33 | Zinc knuckle CX2CX4HX4C OS=Trema orientale OX=63057 GN=TorRG33x02_127580 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
AT3G31430.1 | 7.9e-11 | 27.22 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |