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Lag0028545 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTAATTGAAAAGCTTACAGCGCTCAAGCTCTCTCAAAAGGAGACTAGCGGAATTGACACATCGGAGTTAGGCCTGCAAACAACTCAAAATAAACTCCAAAACAGATTGGTGGGGAAGGTTCTCTCCCAAAGGATCATCAACATTGAAGCTTTCAAAAAAACAATGAGAGGAGTGTGGAAATTCTGCCGAAGGATAACAATTGATAACATCGGGGACAATCTTTTCCTAATTAACCCACAATCAGAACAGGGAAGAGACAAAATATTGGAAGAAAGCCCGTGGTGTTTCGGTGGCAACATACTCCTCAAAGCTCCAACGACATTTGACTTACCAGAAGATATGGTATTTGAAGAAGCCCTAGTTTTGGGTTCAATTTCATCACCTTCCGTTGGACTACGGAACGAAACCGTGGCTCAATCACTTGGGAGTCGTTTAGGGACAGTTTAG ATGGATGTAATTGAAAAGCTTACAGCGCTCAAGCTCTCTCAAAAGGAGACTAGCGGAATTGACACATCGGAGTTAGGCCTGCAAACAACTCAAAATAAACTCCAAAACAGATTGGTGGGGAAGGTTCTCTCCCAAAGGATCATCAACATTGAAGCTTTCAAAAAAACAATGAGAGGAGTGTGGAAATTCTGCCGAAGGATAACAATTGATAACATCGGGGACAATCTTTTCCTAATTAACCCACAATCAGAACAGGGAAGAGACAAAATATTGGAAGAAAGCCCGTGGTGTTTCGGTGGCAACATACTCCTCAAAGCTCCAACGACATTTGACTTACCAGAAGATATGGTATTTGAAGAAGCCCTAGTTTTGGGTTCAATTTCATCACCTTCCGTTGGACTACGGAACGAAACCGTGGCTCAATCACTTGGGAGTCGTTTAGGGACAGTTTAG ATGGATGTAATTGAAAAGCTTACAGCGCTCAAGCTCTCTCAAAAGGAGACTAGCGGAATTGACACATCGGAGTTAGGCCTGCAAACAACTCAAAATAAACTCCAAAACAGATTGGTGGGGAAGGTTCTCTCCCAAAGGATCATCAACATTGAAGCTTTCAAAAAAACAATGAGAGGAGTGTGGAAATTCTGCCGAAGGATAACAATTGATAACATCGGGGACAATCTTTTCCTAATTAACCCACAATCAGAACAGGGAAGAGACAAAATATTGGAAGAAAGCCCGTGGTGTTTCGGTGGCAACATACTCCTCAAAGCTCCAACGACATTTGACTTACCAGAAGATATGGTATTTGAAGAAGCCCTAGTTTTGGGTTCAATTTCATCACCTTCCGTTGGACTACGGAACGAAACCGTGGCTCAATCACTTGGGAGTCGTTTAGGGACAGTTTAG MDVIEKLTALKLSQKETSGIDTSELGLQTTQNKLQNRLVGKVLSQRIINIEAFKKTMRGVWKFCRRITIDNIGDNLFLINPQSEQGRDKILEESPWCFGGNILLKAPTTFDLPEDMVFEEALVLGSISSPSVGLRNETVAQSLGSRLGTV Homology
BLAST of Lag0028545 vs. NCBI nr
Match: OMO60899.1 (hypothetical protein COLO4_33689 [Corchorus olitorius]) HSP 1 Score: 85.1 bits (209), Expect = 5.6e-13 Identity = 46/148 (31.08%), Postives = 83/148 (56.08%), Query Frame = 0
BLAST of Lag0028545 vs. NCBI nr
Match: OMO70721.1 (Zinc finger, CCHC-type [Corchorus olitorius]) HSP 1 Score: 83.2 bits (204), Expect = 2.1e-12 Identity = 46/144 (31.94%), Postives = 82/144 (56.94%), Query Frame = 0
BLAST of Lag0028545 vs. NCBI nr
Match: XP_042941294.1 (uncharacterized protein LOC122275977 [Carya illinoinensis]) HSP 1 Score: 77.8 bits (190), Expect = 8.9e-11 Identity = 41/150 (27.33%), Postives = 77/150 (51.33%), Query Frame = 0
BLAST of Lag0028545 vs. NCBI nr
Match: XP_010689025.1 (PREDICTED: uncharacterized protein LOC104902818 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 77.8 bits (190), Expect = 8.9e-11 Identity = 43/150 (28.67%), Postives = 81/150 (54.00%), Query Frame = 0
BLAST of Lag0028545 vs. NCBI nr
Match: XP_042958054.1 (uncharacterized protein LOC122293569 [Carya illinoinensis]) HSP 1 Score: 77.8 bits (190), Expect = 8.9e-11 Identity = 43/150 (28.67%), Postives = 77/150 (51.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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