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Lag0028544 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTCTGGGAAGCTTTATCCATCCTACTCCACATCATGCATTTTCCCACCAACCCATCTTCATCTTCATCTTCCTTCCCCATTTCCTCTTCTCAAAATCTCTTCCCAACTCAAATTGATCAGCTCTGAATCCGTCTCCCTCTCTTTTCCAACCTCATTTGCTTCTAAACCCAGTGCCAACTCCATTAGATTTTCGAATTCAGTGGCCAAAGTTTATAGCTATGACGACCAAAACCCCACTGCTTTGTCGGATTTGGATGACTTGTCCGAGAATGGAGTTGTCTATAAGAAGACATTGGCGATGGTCGAGTGCTCCATGTTCGCTGCACTTAATGGCTTGGTCTACTTCTTGAGTAATTCACTTGCTCTTGAGGTTTGTAGTTATCAGTTTCAACGAATTTGATTTCTTTCCTCCTATGCTGCTGTTTCTGTCATTTTCCGTCTTTTTTGGATTACTTTTTTCTGGTTGTTTTCTTTATATGAGAGGGATGCCCTAAGTCCATGTGGTGTTTGGTTTGCTTTGGAAGAGATTCTTCTCCATTGATCTCAATTTGAGATGCTTTTTTGCATTGATTTTTTAGTTTCACTTAAAATTTATCATAATTGACTAAATGTATGTGAATGGTTAATACTACTGATGAAATTCTTTTTGTTTGTCAATATGGAGATTTTCTTAAACAGGACATCTTGGGGCTTGTGTAGGGTCCTCCTAAACTATCCTCAATAACAAGGAAATAAACTGAAGACAATTCACTTATGTATTCTTCCATGGAGTATGCAATACATATACAACTCATAGTCTAACTAATCCTGGTAAACCTATTCTCTAAAGCTAACTGACTAATAACCAAATAACAATAGTACAACAGCACTAATACTCCATCTCTATATGGGAATGAATATCGAAAAGCTCCTGTCTTCTGTAATAGAGAGAAAGAGCACTAAACTGGGAAGAGAAAGCCAAATTGTTAAAAAGTTTGAGAATACCATCAGATAACTTTGACACAGACAAAGAAAGCCAAAAATCTTTTAGCAATTACGCAAGTTTGGTGACAGCTTCATGAGAAATCATTCTGTGATGAAGAGATGGAAAAATTTGTATAATGCTTGGAAAGAGATTACTAAAGCCTCTGATTTTGTGTGGGGAAATTGTTCCTTCAACGTGGGTTTGGGTGATAAGGCCCTTTCTTGGGAAGATAGATGGAGGGGTGATCAACCTCTCAAGTGTGTTTTTCCTAATTTGTACAGAATCTCCTTCAGCAAAGCGTTCAGTATTAAGGACCTTCAGAAAGATAGCACCTGGGATCTTCGTTTCCATAGAAATTTGCTGAATAGAGAGCTTCAAGAGTGGGATACCTTGGCTTCTTTGATAGGCAGCTTTAATCCTTCAGGAAGGGAGGATGTTCTGACTTGGAGGTTGGATAAATCAGGGATGTTTTCTGTCAAGTCAGCCTTGGAAGAGATTCAAACTAAAAGAAGAATTCTGGAGGAAGATCTCAGCAGTCAAATCTGGGAAGGCAACATTCCTAAGAAAGTTAAGTTTTTCTTGTGGTCTTCGGCCCTTAATAGTATTAACACCATGGATAGAATCCAGAGGAGGTTTCCTAGTCTTAATCTTTCCCGGCTGGCGTGTGATGTGTGGCAATAA ATGATTTCTGGGAAGCTTTATCCATCCTACTCCACATCATGCATTTTCCCACCAACCCATCTTCATCTTCATCTTCCTTCCCCATTTCCTCTTCTCAAAATCTCTTCCCAACTCAAATTGATCAGCTCTGAATCCGTCTCCCTCTCTTTTCCAACCTCATTTGCTTCTAAACCCAGTGCCAACTCCATTAGATTTTCGAATTCAGTGGCCAAAGTTTATAGCTATGACGACCAAAACCCCACTGCTTTGTCGGATTTGGATGACTTGTCCGAGAATGGAGTTGTCTATAAGAAGACATTGGCGATGGTCGAGTGCTCCATGTTCGCTGCACTTAATGGCTTGGTCTACTTCTTGAGTAATTCACTTGCTCTTGAGAGATGGAAAAATTTGTATAATGCTTGGAAAGAGATTACTAAAGCCTCTGATTTTGTGTGGGGAAATTGTTCCTTCAACGTGGGTTTGGGTGATAAGGCCCTTTCTTGGGAAGATAGATGGAGGGGTGATCAACCTCTCAAGTGTGTTTTTCCTAATTTGTACAGAATCTCCTTCAGCAAAGCGTTCAGTATTAAGGACCTTCAGAAAGATAGCACCTGGGATCTTCGTTTCCATAGAAATTTGCTGAATAGAGAGCTTCAAGAGTGGGATACCTTGGCTTCTTTGATAGGCAGCTTTAATCCTTCAGGAAGGGAGGATGTTCTGACTTGGAGGTTGGATAAATCAGGGATGTTTTCTGTCAAGTCAGCCTTGGAAGAGATTCAAACTAAAAGAAGAATTCTGGAGGAAGATCTCAGCAGTCAAATCTGGGAAGGCAACATTCCTAAGAAAGTTAAGTTTTTCTTGTGGTCTTCGGCCCTTAATAGTATTAACACCATGGATAGAATCCAGAGGAGGTTTCCTAGTCTTAATCTTTCCCGGCTGGCGTGTGATGTGTGGCAATAA ATGATTTCTGGGAAGCTTTATCCATCCTACTCCACATCATGCATTTTCCCACCAACCCATCTTCATCTTCATCTTCCTTCCCCATTTCCTCTTCTCAAAATCTCTTCCCAACTCAAATTGATCAGCTCTGAATCCGTCTCCCTCTCTTTTCCAACCTCATTTGCTTCTAAACCCAGTGCCAACTCCATTAGATTTTCGAATTCAGTGGCCAAAGTTTATAGCTATGACGACCAAAACCCCACTGCTTTGTCGGATTTGGATGACTTGTCCGAGAATGGAGTTGTCTATAAGAAGACATTGGCGATGGTCGAGTGCTCCATGTTCGCTGCACTTAATGGCTTGGTCTACTTCTTGAGTAATTCACTTGCTCTTGAGAGATGGAAAAATTTGTATAATGCTTGGAAAGAGATTACTAAAGCCTCTGATTTTGTGTGGGGAAATTGTTCCTTCAACGTGGGTTTGGGTGATAAGGCCCTTTCTTGGGAAGATAGATGGAGGGGTGATCAACCTCTCAAGTGTGTTTTTCCTAATTTGTACAGAATCTCCTTCAGCAAAGCGTTCAGTATTAAGGACCTTCAGAAAGATAGCACCTGGGATCTTCGTTTCCATAGAAATTTGCTGAATAGAGAGCTTCAAGAGTGGGATACCTTGGCTTCTTTGATAGGCAGCTTTAATCCTTCAGGAAGGGAGGATGTTCTGACTTGGAGGTTGGATAAATCAGGGATGTTTTCTGTCAAGTCAGCCTTGGAAGAGATTCAAACTAAAAGAAGAATTCTGGAGGAAGATCTCAGCAGTCAAATCTGGGAAGGCAACATTCCTAAGAAAGTTAAGTTTTTCTTGTGGTCTTCGGCCCTTAATAGTATTAACACCATGGATAGAATCCAGAGGAGGTTTCCTAGTCTTAATCTTTCCCGGCTGGCGTGTGATGTGTGGCAATAA MISGKLYPSYSTSCIFPPTHLHLHLPSPFPLLKISSQLKLISSESVSLSFPTSFASKPSANSIRFSNSVAKVYSYDDQNPTALSDLDDLSENGVVYKKTLAMVECSMFAALNGLVYFLSNSLALERWKNLYNAWKEITKASDFVWGNCSFNVGLGDKALSWEDRWRGDQPLKCVFPNLYRISFSKAFSIKDLQKDSTWDLRFHRNLLNRELQEWDTLASLIGSFNPSGREDVLTWRLDKSGMFSVKSALEEIQTKRRILEEDLSSQIWEGNIPKKVKFFLWSSALNSINTMDRIQRRFPSLNLSRLACDVWQ Homology
BLAST of Lag0028544 vs. NCBI nr
Match: XP_022145869.1 (uncharacterized protein LOC111015219 [Momordica charantia] >XP_022145870.1 uncharacterized protein LOC111015219 [Momordica charantia]) HSP 1 Score: 185.7 bits (470), Expect = 6.3e-43 Identity = 101/129 (78.29%), Postives = 109/129 (84.50%), Query Frame = 0
BLAST of Lag0028544 vs. NCBI nr
Match: XP_022929150.1 (uncharacterized protein LOC111435817 [Cucurbita moschata]) HSP 1 Score: 185.3 bits (469), Expect = 8.2e-43 Identity = 103/133 (77.44%), Postives = 111/133 (83.46%), Query Frame = 0
BLAST of Lag0028544 vs. NCBI nr
Match: XP_023549519.1 (uncharacterized protein LOC111807999 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183.7 bits (465), Expect = 2.4e-42 Identity = 102/133 (76.69%), Postives = 112/133 (84.21%), Query Frame = 0
BLAST of Lag0028544 vs. NCBI nr
Match: XP_022969819.1 (uncharacterized protein LOC111468904 [Cucurbita maxima] >XP_022969820.1 uncharacterized protein LOC111468904 [Cucurbita maxima]) HSP 1 Score: 181.8 bits (460), Expect = 9.1e-42 Identity = 101/131 (77.10%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of Lag0028544 vs. NCBI nr
Match: XP_038885169.1 (uncharacterized protein LOC120075651 [Benincasa hispida]) HSP 1 Score: 181.0 bits (458), Expect = 1.6e-41 Identity = 98/127 (77.17%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of Lag0028544 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.1e-05 Identity = 46/175 (26.29%), Postives = 74/175 (42.29%), Query Frame = 0
BLAST of Lag0028544 vs. ExPASy TrEMBL
Match: A0A6J1CVR0 (uncharacterized protein LOC111015219 OS=Momordica charantia OX=3673 GN=LOC111015219 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 3.0e-43 Identity = 101/129 (78.29%), Postives = 109/129 (84.50%), Query Frame = 0
BLAST of Lag0028544 vs. ExPASy TrEMBL
Match: A0A6J1ETG3 (uncharacterized protein LOC111435817 OS=Cucurbita moschata OX=3662 GN=LOC111435817 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 4.0e-43 Identity = 103/133 (77.44%), Postives = 111/133 (83.46%), Query Frame = 0
BLAST of Lag0028544 vs. ExPASy TrEMBL
Match: A0A6J1I3S1 (uncharacterized protein LOC111468904 OS=Cucurbita maxima OX=3661 GN=LOC111468904 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.4e-42 Identity = 101/131 (77.10%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of Lag0028544 vs. ExPASy TrEMBL
Match: A0A1S4DVX7 (uncharacterized protein LOC103488678 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103488678 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 1.5e-37 Identity = 96/134 (71.64%), Postives = 105/134 (78.36%), Query Frame = 0
BLAST of Lag0028544 vs. ExPASy TrEMBL
Match: A0A1S3BEA4 (uncharacterized protein LOC103488678 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488678 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 1.5e-37 Identity = 96/134 (71.64%), Postives = 105/134 (78.36%), Query Frame = 0
BLAST of Lag0028544 vs. TAIR 10
Match: AT1G26180.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2232, membrane (InterPro:IPR018710); Has 285 Blast hits to 285 proteins in 90 species: Archae - 0; Bacteria - 140; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 1.0e-06 Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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