
Lag0028539 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCTTGCAAGTGAAATCCCAGAAGAATCCCAGTTCGAAGCAGCACCAGAAAAGTACTTTTGGACGACCCAAACCAACAACAATCTTCCCAACATGATCCCCAATGGAATATTATTCTGTTGTCCAACAACAACAAGCAATTACAATAATAACATAATTAGCAGCAGTGGTTGTGAACAAGAAGAAGAGCAAGTGAAAATGGTGGAGGAAAGGAAGCAGAGGAGGATGATATCGAACCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAAGGAGCTTTGGTCTCAACTGGTTCGGCTCTGCACTGAGAACCATGACCTTGAAGAGAAGCTGAGGCGTTTGATGGACTCTCAGCACCGCCTTCTCCAAGAGAATGCCACTCTTAGGCAACAAGCTTCTGGTTTTCGCCAGATCCTTAGAGATATGGAGCTTGACCAACAACTCGTCACCCAATTTTGA ATGCTTCTTGCAAGTGAAATCCCAGAAGAATCCCAGTTCGAAGCAGCACCAGAAAAGTACTTTTGGACGACCCAAACCAACAACAATCTTCCCAACATGATCCCCAATGGAATATTATTCTGTTGTCCAACAACAACAAGCAATTACAATAATAACATAATTAGCAGCAGTGGTTGTGAACAAGAAGAAGAGCAAGTGAAAATGGTGGAGGAAAGGAAGCAGAGGAGGATGATATCGAACCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAAGGAGCTTTGGTCTCAACTGGTTCGGCTCTGCACTGAGAACCATGACCTTGAAGAGAAGCTGAGGCGTTTGATGGACTCTCAGCACCGCCTTCTCCAAGAGAATGCCACTCTTAGGCAACAAGCTTCTGGTTTTCGCCAGATCCTTAGAGATATGGAGCTTGACCAACAACTCGTCACCCAATTTTGA ATGCTTCTTGCAAGTGAAATCCCAGAAGAATCCCAGTTCGAAGCAGCACCAGAAAAGTACTTTTGGACGACCCAAACCAACAACAATCTTCCCAACATGATCCCCAATGGAATATTATTCTGTTGTCCAACAACAACAAGCAATTACAATAATAACATAATTAGCAGCAGTGGTTGTGAACAAGAAGAAGAGCAAGTGAAAATGGTGGAGGAAAGGAAGCAGAGGAGGATGATATCGAACCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAAGGAGCTTTGGTCTCAACTGGTTCGGCTCTGCACTGAGAACCATGACCTTGAAGAGAAGCTGAGGCGTTTGATGGACTCTCAGCACCGCCTTCTCCAAGAGAATGCCACTCTTAGGCAACAAGCTTCTGGTTTTCGCCAGATCCTTAGAGATATGGAGCTTGACCAACAACTCGTCACCCAATTTTGA MLLASEIPEESQFEAAPEKYFWTTQTNNNLPNMIPNGILFCCPTTTSNYNNNIISSSGCEQEEEQVKMVEERKQRRMISNRESARRSRMRKQKHLKELWSQLVRLCTENHDLEEKLRRLMDSQHRLLQENATLRQQASGFRQILRDMELDQQLVTQF Homology
BLAST of Lag0028539 vs. NCBI nr
Match: XP_038886758.1 (basic leucine zipper 43-like [Benincasa hispida]) HSP 1 Score: 169.5 bits (428), Expect = 2.3e-38 Identity = 103/161 (63.98%), Postives = 124/161 (77.02%), Query Frame = 0
BLAST of Lag0028539 vs. NCBI nr
Match: XP_023550514.1 (basic leucine zipper 43-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 164.5 bits (415), Expect = 7.6e-37 Identity = 100/160 (62.50%), Postives = 112/160 (70.00%), Query Frame = 0
BLAST of Lag0028539 vs. NCBI nr
Match: XP_022929151.1 (basic leucine zipper 43-like [Cucurbita moschata]) HSP 1 Score: 164.5 bits (415), Expect = 7.6e-37 Identity = 100/160 (62.50%), Postives = 112/160 (70.00%), Query Frame = 0
BLAST of Lag0028539 vs. NCBI nr
Match: XP_008445746.2 (PREDICTED: basic leucine zipper 43-like [Cucumis melo] >KAA0033003.1 basic leucine zipper 43-like [Cucumis melo var. makuwa] >TYK03412.1 basic leucine zipper 43-like [Cucumis melo var. makuwa]) HSP 1 Score: 163.3 bits (412), Expect = 1.7e-36 Identity = 97/142 (68.31%), Postives = 113/142 (79.58%), Query Frame = 0
BLAST of Lag0028539 vs. NCBI nr
Match: KAG6579707.1 (Basic leucine zipper 43, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.9 bits (411), Expect = 2.2e-36 Identity = 99/160 (61.88%), Postives = 111/160 (69.38%), Query Frame = 0
BLAST of Lag0028539 vs. ExPASy Swiss-Prot
Match: Q9FMC2 (Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.0e-15 Identity = 56/139 (40.29%), Postives = 84/139 (60.43%), Query Frame = 0
BLAST of Lag0028539 vs. ExPASy Swiss-Prot
Match: Q9CA46 (Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.3e-11 Identity = 38/83 (45.78%), Postives = 62/83 (74.70%), Query Frame = 0
BLAST of Lag0028539 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.9e-07 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 0
BLAST of Lag0028539 vs. ExPASy Swiss-Prot
Match: P24068 (Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.9e-06 Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Lag0028539 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.6e-05 Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|