Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCTATTTCTCTTGTTGAGGATTGGTCCCGCTTGAGTCTGACCTCTAAAGAGGAGGAAATATCTGTGGAAGCTGATCGTTCTGCGTCTGATCGAACTGGTCAGATTCTTGGTTGTTGTTTGCTCGGAAAATTGTTATCTCATCGGTATTTGGCGGTGGAGGTGATGCATAAAACCTTCACTGCCGCTTGGAGATTAGATCGTGGTATGAATGTGGATCTCCTGGGTAAAAATTTATTTATGTTCCATTTCGAAAATGAGGAAGACCGGTGGAGGATTGTTCGTCAGTGTCCTTGGTTATTCGAAAAATTTCTTCTGGTGCTTGAGGTCCCAATTCGTTCTCTCAAACCATCTGATTATTCCTTATGTTATGTGGCTTTTTGGATTCATGTATATGACCTACTGCTAGACTGGTTTAATCAAATGATGGCAGAGAAGCTCAGAAATGCGATCAGCAAATATGAAGAGACAGATGGAAGAAATGGCTTTCACTTTTGGGGTGCTAGCTTACGGATTTGTGTTCGTATTGATGTTCAACGTCCTCTCCAGCGTGGAATCAAGATTAATCCTATCAGCGTGTTAAATGAGGTCTGGATACCATTTCGGTATGAAAAGCTTCCCGATTACTGTTCTTTTTGTGGGATTATCGGTCACCTTGTGCGAGATTGTGGTCGTTCCTATCGAATTGAGAATGTCCCCACTGCCTCTATCCAATATGGTGACTGGTTGCATTTCTCCAAAAAGGGATCTGTTCTGGTTCGATTGATGACAGGAGATGTTGGGAGTGGAGTAGATCGTTGAGCCCTTCCGCCTAAACCCTCTCGCTTCAGCCCCCTGTTGCAATGGAGACTGAGGCAACTCCTGCCCAGTCGGTTAGTCGGGGACAAAATAATTCAGAGTTCAAGGCATCGAGGATATTGAGTCAGAGAAGCAGAGGAGTTCGATTGAGCCCTATTCACTATTCACTGGTCGGGGATTCGATGTTTGTCAGTAAAACTAAGGAGAATGTGACTGAGATGGCGTAA
mRNA sequence
ATGGATCCTATTTCTCTTGTTGAGGATTGGTCCCGCTTGAGTCTGACCTCTAAAGAGGAGGAAATATCTGTGGAAGCTGATCGTTCTGCGTCTGATCGAACTGGTCAGATTCTTGGTTGTTGTTTGCTCGGAAAATTGTTATCTCATCGGTATTTGGCGGTGGAGGTGATGCATAAAACCTTCACTGCCGCTTGGAGATTAGATCGTGGTATGAATGTGGATCTCCTGGGTAAAAATTTATTTATGTTCCATTTCGAAAATGAGGAAGACCGGTGGAGGATTGTTCGTCAGTGTCCTTGGTTATTCGAAAAATTTCTTCTGGTGCTTGAGGTCCCAATTCGTTCTCTCAAACCATCTGATTATTCCTTATGTTATGTGGCTTTTTGGATTCATGTATATGACCTACTGCTAGACTGGTTTAATCAAATGATGGCAGAGAAGCTCAGAAATGCGATCAGCAAATATGAAGAGACAGATGGAAGAAATGGCTTTCACTTTTGGGGTGCTAGCTTACGGATTTGTGTTCGTATTGATGTTCAACGTCCTCTCCAGCGTGGAATCAAGATTAATCCTATCAGCGTGTTAAATGAGGTCTGGATACCATTTCGGTATGAAAAGCTTCCCGATTACTGTTCTTTTTGTGGGATTATCGGTCACCTTGTGCGAGATTGTGGTCGTTCCTATCGAATTGAGAATGTCCCCACTGCCTCTATCCAATATGGTGACTGGTTGCATTTCTCCAAAAAGGGATCTGTTCTGCCCCCTGTTGCAATGGAGACTGAGGCAACTCCTGCCCAGTCGGTTAGTCGGGGACAAAATAATTCAGAGTTCAAGGCATCGAGGATATTGAGTCAGAGAAGCAGAGGAGTTCGATTGAGCCCTATTCACTATTCACTGGTCGGGGATTCGATGTTTGTCAGTAAAACTAAGGAGAATGTGACTGAGATGGCGTAA
Coding sequence (CDS)
ATGGATCCTATTTCTCTTGTTGAGGATTGGTCCCGCTTGAGTCTGACCTCTAAAGAGGAGGAAATATCTGTGGAAGCTGATCGTTCTGCGTCTGATCGAACTGGTCAGATTCTTGGTTGTTGTTTGCTCGGAAAATTGTTATCTCATCGGTATTTGGCGGTGGAGGTGATGCATAAAACCTTCACTGCCGCTTGGAGATTAGATCGTGGTATGAATGTGGATCTCCTGGGTAAAAATTTATTTATGTTCCATTTCGAAAATGAGGAAGACCGGTGGAGGATTGTTCGTCAGTGTCCTTGGTTATTCGAAAAATTTCTTCTGGTGCTTGAGGTCCCAATTCGTTCTCTCAAACCATCTGATTATTCCTTATGTTATGTGGCTTTTTGGATTCATGTATATGACCTACTGCTAGACTGGTTTAATCAAATGATGGCAGAGAAGCTCAGAAATGCGATCAGCAAATATGAAGAGACAGATGGAAGAAATGGCTTTCACTTTTGGGGTGCTAGCTTACGGATTTGTGTTCGTATTGATGTTCAACGTCCTCTCCAGCGTGGAATCAAGATTAATCCTATCAGCGTGTTAAATGAGGTCTGGATACCATTTCGGTATGAAAAGCTTCCCGATTACTGTTCTTTTTGTGGGATTATCGGTCACCTTGTGCGAGATTGTGGTCGTTCCTATCGAATTGAGAATGTCCCCACTGCCTCTATCCAATATGGTGACTGGTTGCATTTCTCCAAAAAGGGATCTGTTCTGCCCCCTGTTGCAATGGAGACTGAGGCAACTCCTGCCCAGTCGGTTAGTCGGGGACAAAATAATTCAGAGTTCAAGGCATCGAGGATATTGAGTCAGAGAAGCAGAGGAGTTCGATTGAGCCCTATTCACTATTCACTGGTCGGGGATTCGATGTTTGTCAGTAAAACTAAGGAGAATGTGACTGAGATGGCGTAA
Protein sequence
MDPISLVEDWSRLSLTSKEEEISVEADRSASDRTGQILGCCLLGKLLSHRYLAVEVMHKTFTAAWRLDRGMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSDYSLCYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQRPLQRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDCGRSYRIENVPTASIQYGDWLHFSKKGSVLPPVAMETEATPAQSVSRGQNNSEFKASRILSQRSRGVRLSPIHYSLVGDSMFVSKTKENVTEMA
Homology
BLAST of Lag0028530 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 225.7 bits (574), Expect = 5.6e-55
Identity = 108/254 (42.52%), Postives = 157/254 (61.81%), Query Frame = 0
Query: 1 MDPISLVEDWSRLSLTSKEEEISVEADRSASDRTGQILGCCLLGKLLSHRYLAVEVMHKT 60
MD +L+ DW + LTS+E+EI+++ D A Q L L+GKLL+ R ++ +V+ +
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 FTAAWRLDRGMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSD 120
AW+++ + V+ +GKNLF+FHF E D R+++ PW F+K L+VL+ P S S+
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 YSLCYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQ 180
VAFWIH++DL + W N+ MA +L NAI + + D WGASLRI V ID+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 RPLQRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDCGRSY-RIENVPTASIQ 240
+PL+RGIKIN + WIP +YE+LPD+C FCG+IGH DC Y ++ A+ +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240
Query: 241 YGDWLHF--SKKGS 252
YG WL F SK G+
Sbjct: 241 YGPWLRFVGSKAGA 254
BLAST of Lag0028530 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 208.0 bits (528), Expect = 1.2e-49
Identity = 96/243 (39.51%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 5 SLVEDWSRLSLTSKEEEISVEADRSASDRTGQILGCCLLGKLLSHRYLAVEVMHKTFTAA 64
+L+E+W LTS+E++I+V+ D SA + TG+ L L+ KLLS R ++ V+ T A
Sbjct: 5 NLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIA 64
Query: 65 WRLD-RGMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSDYSL 124
W+LD + +VD++G N+F+F+F DR RI+R PW F++ L++++ P+ KP D
Sbjct: 65 WKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDF 124
Query: 125 CYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQRPL 184
V+ W+H +DL L N+ MA +L NAI +E+ + WG+ LR+ VR DV +PL
Sbjct: 125 RNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPL 184
Query: 185 QRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDCGRSYRIENVPTASIQYGDW 244
RGIK+N + WIP +YE+LPD+ CG + H+++DC +++V + ++QYG W
Sbjct: 185 HRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCS-DCCVDSV-SKNLQYGPW 244
Query: 245 LHF 247
L F
Sbjct: 245 LRF 245
BLAST of Lag0028530 vs. NCBI nr
Match:
XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])
HSP 1 Score: 181.8 bits (460), Expect = 9.2e-42
Identity = 97/254 (38.19%), Postives = 149/254 (58.66%), Query Frame = 0
Query: 5 SLVEDWSRLSLTSKEEEISVEADRSASDRTGQILG---CCLLGKLLSHRYLAVEVMHKTF 64
SLV+ LSLTS+E+ + R D T ++G CL+GKLL+ R VE M T
Sbjct: 4 SLVDLTRTLSLTSEEDAVV----RIGGDSTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTL 63
Query: 65 TAAWRLDRGMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSDY 124
+ W+ +GM V ++G NLF+F F + D+ R++ PW F+K LL+L +++PSD
Sbjct: 64 LSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSDI 123
Query: 125 SLCYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQR 184
L V FW+HV +L L N+ + + + NA+ ++ + D +G WG ++RI V IDV++
Sbjct: 124 QLTGVQFWVHVCNLPLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAIDVRK 183
Query: 185 PLQRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDCGRSYRI-ENVPTASIQY 244
PL+RG+K+ +S + +W+ F+YE+LP YC FCG +GH R+C + S+QY
Sbjct: 184 PLRRGMKL-ALSSADPIWVDFKYERLPIYCYFCGRLGHSDRECDDKLSFADGTRVDSLQY 243
Query: 245 GDWL---HFSKKGS 252
G WL + KGS
Sbjct: 244 GAWLRMDNIKSKGS 252
BLAST of Lag0028530 vs. NCBI nr
Match:
XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])
HSP 1 Score: 179.1 bits (453), Expect = 6.0e-41
Identity = 95/251 (37.85%), Postives = 147/251 (58.57%), Query Frame = 0
Query: 5 SLVEDWSRLSLTSKEEEISVEADRSASDRTGQILGCCLLGKLLSHRYLAVEVMHKTFTAA 64
SL++ LSLTS+E+ + S S G+ CL+GKLL+ R VE M T +
Sbjct: 4 SLLDLTRTLSLTSEEDAVVRIGGESTSLMMGK-SDMCLVGKLLTRRPFNVEAMKNTLLSV 63
Query: 65 WRLDRGMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSDYSLC 124
W+ +GM V ++G NLF+F F + D+ R++ PW F+K LL+L +++PSD L
Sbjct: 64 WQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLT 123
Query: 125 YVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQRPLQ 184
V FW+HV +L L N+ + E + NA+ ++ + D +G WG ++RI V +DV++PL+
Sbjct: 124 RVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPLR 183
Query: 185 RGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDC-GRSYRIENVPTASIQYGDW 244
RG+K+ +S +W+ F+YE+LP YC FCG +GH R+C + + S+QYG W
Sbjct: 184 RGMKL-ALSSAEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGAW 243
Query: 245 L---HFSKKGS 252
L + KGS
Sbjct: 244 LRMDNIKSKGS 252
BLAST of Lag0028530 vs. NCBI nr
Match:
XP_028071384.1 (uncharacterized protein LOC114273772 [Camellia sinensis])
HSP 1 Score: 176.8 bits (447), Expect = 3.0e-40
Identity = 91/244 (37.30%), Postives = 145/244 (59.43%), Query Frame = 0
Query: 5 SLVEDWSRLSLTSKEEEISVEADRSASDRTGQILG---CCLLGKLLSHRYLAVEVMHKTF 64
SL++ LSLTS+E+ + R D T ++G CL+ KLL+ R VE M T
Sbjct: 4 SLLDLTRTLSLTSEEDAVV----RIGGDSTSLMMGKSDMCLVSKLLTRRPFNVEAMKSTL 63
Query: 65 TAAWRLDRGMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSDY 124
+ W+ +GM V ++G NLF+F F + D+ RI+ PW F+K LL+L +++PSD
Sbjct: 64 LSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRILSNGPWTFDKHLLMLGEMDPNVQPSDI 123
Query: 125 SLCYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQR 184
L +V FW+HV +L L N+ + + + NA+ ++ + D +G WG ++ I V +DV++
Sbjct: 124 QLTWVQFWVHVCNLPLILMNKKVGQIVGNAVGQFIDMDYEDGGIAWGRTMLIRVALDVRK 183
Query: 185 PLQRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDC-GRSYRIENVPTASIQY 244
PL+RG+K+ +S + +W+ F+YE+LP YC FCG +GH R+C + + S+QY
Sbjct: 184 PLRRGMKL-ALSSVEPIWVDFKYERLPIYCYFCGRLGHSDRECDAKLSSADGTRVDSLQY 242
BLAST of Lag0028530 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 225.7 bits (574), Expect = 2.7e-55
Identity = 108/254 (42.52%), Postives = 157/254 (61.81%), Query Frame = 0
Query: 1 MDPISLVEDWSRLSLTSKEEEISVEADRSASDRTGQILGCCLLGKLLSHRYLAVEVMHKT 60
MD +L+ DW + LTS+E+EI+++ D A Q L L+GKLL+ R ++ +V+ +
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 FTAAWRLDRGMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSD 120
AW+++ + V+ +GKNLF+FHF E D R+++ PW F+K L+VL+ P S S+
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 YSLCYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQ 180
VAFWIH++DL + W N+ MA +L NAI + + D WGASLRI V ID+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 RPLQRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDCGRSY-RIENVPTASIQ 240
+PL+RGIKIN + WIP +YE+LPD+C FCG+IGH DC Y ++ A+ +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240
Query: 241 YGDWLHF--SKKGS 252
YG WL F SK G+
Sbjct: 241 YGPWLRFVGSKAGA 254
BLAST of Lag0028530 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 208.0 bits (528), Expect = 5.8e-50
Identity = 96/243 (39.51%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 5 SLVEDWSRLSLTSKEEEISVEADRSASDRTGQILGCCLLGKLLSHRYLAVEVMHKTFTAA 64
+L+E+W LTS+E++I+V+ D SA + TG+ L L+ KLLS R ++ V+ T A
Sbjct: 5 NLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIA 64
Query: 65 WRLD-RGMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSDYSL 124
W+LD + +VD++G N+F+F+F DR RI+R PW F++ L++++ P+ KP D
Sbjct: 65 WKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDF 124
Query: 125 CYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQRPL 184
V+ W+H +DL L N+ MA +L NAI +E+ + WG+ LR+ VR DV +PL
Sbjct: 125 RNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPL 184
Query: 185 QRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDCGRSYRIENVPTASIQYGDW 244
RGIK+N + WIP +YE+LPD+ CG + H+++DC +++V + ++QYG W
Sbjct: 185 HRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCS-DCCVDSV-SKNLQYGPW 244
Query: 245 LHF 247
L F
Sbjct: 245 LRF 245
BLAST of Lag0028530 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 1.4e-40
Identity = 98/295 (33.22%), Postives = 156/295 (52.88%), Query Frame = 0
Query: 1 MDPISLVEDWSRLSLTSKEEEISVEADRSASDRTGQILGCCLLGKLLSHRYLAVEVMHKT 60
M L+E+W LTS+EEE +++ D SA TG L L+GKL R + VM T
Sbjct: 1 MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60
Query: 61 FTAAWRLD-RGMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPS 120
AW+L+ V LG NLF+F F DR +I + PW F++ L+++ P+ + PS
Sbjct: 61 MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120
Query: 121 DYSLCYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDV 180
+ + W+ +DL L + MA +L NA+ +EE D + WG++LR+ V +D+
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180
Query: 181 QRPLQRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDCGRSYRIENVPTASIQ 240
+PL+RGIK+N + WIP +YE+LPD+C CG+ S R ++ Q
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---------SSSRKKH------Q 240
Query: 241 YGDWLHFSKKGSVLPPVAMETEATPAQSVSRGQNNSEFKASRILSQRSRGVRLSP 295
YG WL + +G+V P + + + + + NNS ++ + S+GV+ +P
Sbjct: 241 YGSWLRY--QGTVKPTMP-QMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGVQSAP 277
BLAST of Lag0028530 vs. ExPASy TrEMBL
Match:
A0A2N9GWE9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31787 PE=4 SV=1)
HSP 1 Score: 157.9 bits (398), Expect = 6.9e-35
Identity = 82/246 (33.33%), Postives = 131/246 (53.25%), Query Frame = 0
Query: 6 LVEDWSRLSLTSKE-EEISVEADRSASDRTGQILGCCLLGKLLSHRYLAVEVMHKTFTAA 65
LVE+W + SLT E +++ AD A + + + CLLGKL + +Y E + T
Sbjct: 5 LVEEWRKFSLTEAEGPGVTIAAD--AMEVSRMVGSHCLLGKLWTEKYFNREALKATMLRL 64
Query: 66 W-RLDRGMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSDYSL 125
W + RG+ +G+NLF+F F ++ +R R++ PWLF+ LL+L+ S S
Sbjct: 65 WGGVARGITARNIGENLFVFQFRDDFERRRVMTGAPWLFDNSLLLLKEFDGSCPASQVQF 124
Query: 126 CYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQRPL 185
+ FW+ Y + L + + E++ + K EE D WG LR+ + +D+ +P+
Sbjct: 125 SWCCFWVQFYGVPLSYMTKQTGEQVGSVFGKVEEVDVSEDGVGWGTYLRVRICLDITKPI 184
Query: 186 QRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDC-GRSYRIENVPTASIQYGD 245
RG ++ + L ++W+ F+YE+LP C CG+IGHL RDC R + P QYG
Sbjct: 185 PRG-RVVTFNSLGQMWVSFKYERLPWLCFHCGLIGHLERDCVSRGKNNSSSPGGVQQYGP 244
Query: 246 WLHFSK 249
WL S+
Sbjct: 245 WLRASE 247
BLAST of Lag0028530 vs. ExPASy TrEMBL
Match:
A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 1.3e-33
Identity = 76/235 (32.34%), Postives = 125/235 (53.19%), Query Frame = 0
Query: 10 WSRLSLTSKEEEISVEADRSASDRTGQILGCCLLGKLLSHRYLAVEVMHKTFTAAWRLDR 69
W T+ E E +V DR T + C++ KL + + ++ E + + WR+
Sbjct: 8 WEHFKSTNDENE-TVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHN 67
Query: 70 GMNVDLLGKNLFMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSDYSLCYVAFW 129
+ LG N+++ F++ ++ R++ PW F K LLVL P + +P D + + AFW
Sbjct: 68 STRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFW 127
Query: 130 IHVYDLLLDWFNQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQRPLQRGIKI 189
I ++++ + + MA L + EE +G + G +R+ V+IDV +PL+RGIK+
Sbjct: 128 IQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKL 187
Query: 190 NPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDCGRSYRIENVPTASIQYGDWL 245
S ++W P RYEKLPD+C CG IGH R+C + ++ + QYGDWL
Sbjct: 188 KN-SDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPE-QYGDWL 239
BLAST of Lag0028530 vs. TAIR 10
Match:
AT2G01050.1 (zinc ion binding;nucleic acid binding )
HSP 1 Score: 72.0 bits (175), Expect = 9.6e-13
Identity = 44/188 (23.40%), Postives = 85/188 (45.21%), Query Frame = 0
Query: 41 CLLGKLLSHRYLAVEVMHKTFTAAWRLDRGMNVDLLGKNLFMFHFENEEDRWRIVRQCPW 100
C++ K+L + + + V+++ W+ M V L + FM FE EE+ + PW
Sbjct: 80 CMIVKVLGSQ-IPISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPW 139
Query: 101 -LFEKFLLVLEVPIRSLKPSDYSLCYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETD 160
+ +LLV + R P + W+ + ++ +++++ + ++ + + + D
Sbjct: 140 RVLGNYLLVQDWSSR-FDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVD 199
Query: 161 GRNGFHFWGASLRICVRIDVQRPLQRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGH 220
G R+C+ +++ +PL+ + IN YE L CS CGI GH
Sbjct: 200 MNTINFDKGRFARVCIEVNLAKPLKGTVLINGDRYF------VAYEGLSKICSSCGIYGH 259
Query: 221 LVRDCGRS 228
LV C R+
Sbjct: 260 LVHSCPRN 259
BLAST of Lag0028530 vs. TAIR 10
Match:
AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 57.8 bits (138), Expect = 1.9e-08
Identity = 32/139 (23.02%), Postives = 65/139 (46.76%), Query Frame = 0
Query: 81 FMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLKPSDYSLCYVAFWIHVYDLLLDWF 140
F F F EE ++R+ PW F ++++L+ +P ++ FW+ + + +
Sbjct: 173 FHFIFTLEESLETVLRRGPWAFNDWMILLQ----RWEPQIPLFPFIPFWVQIRGIPFQFL 232
Query: 141 NQMMAEKLRNAISKYEETDGRNGFHFWGASLRICVRIDVQRPLQRGIKINPISVLNEVWI 200
N+ + E + A+ + +TD R+ + D+ PL+ + +N + +
Sbjct: 233 NRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTL-L 292
Query: 201 PFRYEKLPDYCSFCGIIGH 220
FRYE+L +C CG++ H
Sbjct: 293 RFRYERLRGFCEVCGMLTH 306
BLAST of Lag0028530 vs. TAIR 10
Match:
AT3G42140.1 (zinc ion binding;nucleic acid binding )
HSP 1 Score: 49.7 bits (117), Expect = 5.1e-06
Identity = 39/168 (23.21%), Postives = 73/168 (43.45%), Query Frame = 0
Query: 66 RLDRGMNVDLLGKNL----FMFHFENEEDRWRIVRQCPWLFEKFLLVLEVPIRSLK-PSD 125
R + ++ +++G+ L F F++EE + I+R+ PW F ++ V++ R K SD
Sbjct: 43 RCPKNVDEEVVGRILEIHKIEFLFQSEESMFSILRRGPWSFNDWMCVIQ---RWTKLHSD 102
Query: 126 YSLCYVAFWIHVYDLLLDWFNQMMAEKLRNAISKYEETD-GRNGFHFWGASLRICVRIDV 185
+ FWI + + L + + + + + ET+ GR+
Sbjct: 103 AEFKRIPFWIQIRGIPLRFLTARIITSIGERMGLFLETNLGRD----------------- 162
Query: 186 QRPLQRGIKINPISVLNEVWIPFRYEKLPDYCSFCGIIGHLVRDCGRS 228
+SVL F+YEKL ++C+ CG++ H +C S
Sbjct: 163 ------------VSVLK-----FQYEKLKNFCTTCGMLSHDASECPTS 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 5.6e-55 | 42.52 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_022132681.1 | 1.2e-49 | 39.51 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
XP_028124075.1 | 9.2e-42 | 38.19 | uncharacterized protein LOC114321128 [Camellia sinensis] | [more] |
XP_028122006.1 | 6.0e-41 | 37.85 | uncharacterized protein LOC114319195 [Camellia sinensis] | [more] |
XP_028071384.1 | 3.0e-40 | 37.30 | uncharacterized protein LOC114273772 [Camellia sinensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 2.7e-55 | 42.52 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1BSZ1 | 5.8e-50 | 39.51 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A6J1DX30 | 1.4e-40 | 33.22 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A2N9GWE9 | 6.9e-35 | 33.33 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31787 PE=4 SV=1 | [more] |
A0A6J1D765 | 1.3e-33 | 32.34 | uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
Match Name | E-value | Identity | Description | |
AT2G01050.1 | 9.6e-13 | 23.40 | zinc ion binding;nucleic acid binding | [more] |
AT3G31430.1 | 1.9e-08 | 23.02 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT3G42140.1 | 5.1e-06 | 23.21 | zinc ion binding;nucleic acid binding | [more] |