Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAAAAAGCAAAAGAATATAAAAAATCCCCTGGCAAATCGCCGAGGCAAAAACATTCGAGTCCAATGTGGTAAAACCCCAAGTAGGGTTCTAGCTTTGTTCAAATTCACCGGAGCGAACATTGTGCTGCAGAGTGCAGACCGGTGGATGAATCCGACAAGAAGGGAGAACATGGGGCGTAGGGTGCCACTGGCCGGAATGGAGACCTCTATAATGGCCACCGACGCTGTAGAATTCATTGATGTTTCTCTTCCTTCTTCCTCATTCAGAGATGCCGCCATTACTTCCGTTGCTTCACAAGCTAGCTCTTCATTGACTGAGGACCATGCCTCCTGCGCTGTCGTTGGAGATCCTCCAACCTATCTCATCTGGTATGCTCCCTCTTCTCCTCTCAGTTTATTGATTGCGTCGTTCGGTGCCAACAAGCCCAATTGCTCTTCCATTTATTCTTACCCAACAGGAGGATTCGGAAGACTCTACCTCGTGTGGTCGAGTTGCTTGAGTTTTCAACTGCCAACGAATTTCGTAGGATTGGTCTCCGAATTGCTTTTCCGGATGCACTTCACCCAGCCGTGTTTGTTTGCAAAAATGAGGTTAGTTTCTATTTTCCTAATCGGAATTTTCAGCCTGTTGGAATGTTTCAATGTATTCTTATTATTAATTTCCGTGGAACACTGCAGATTAGTTCGTCTACGGTATATCCTTTCTTGATGTACGCAGTGACTTCGTCCGGGGTCGCTTACTGTTTGAAGCTGAGAAATGTTTCCTCATACATTTCCTGCTCAGTCATCCCTCTTGATGAGGTTGTGGAGTTTAATTTGCAAACCCATCCAAACAACAAACCAGTAACCAGCGTATTTGCTGTATCTGGATGCCTCGTGATTGGGAGAAGTGATGGATCAGTTTCATGTTACAAACTTGGGTCGCTTGACCAACATACCCCTGGTATGAATTTACTTTTCAGTCCTTCAGTGGTTACATTATCTAAATATCTTGTAATTTGTCCAAATATGATTGAAAAAATGGGCGATTGGCTTACTTCCATACTAATAAGAAGCTTCTTTATGACCCAGAACAGATGGTCGTTGGCTTAAAACTATAGGATGTTTTTTTTTTGTCAATGGCGAAATACCTTCTTGTGTTGCCATTTCACAATTGTTATTATTATTTTTTTGCTGTTTATGCTGTGCCACAGGATGTAAATGTGAGCTTACAACTATCTGCAATTAATTCTAATTCTTTATTTTTTGTGTTGCACAGTTCTATAGAATATTTGAAACTTGTTCTATTATGTTACATTTATGCATTGTCTCTAACAATTTAGTTTCTATTTTACTTCTAGGCTTTGAACATGAACTACGGGATGATTCAGGATTCAATCGTCTGTTGGGTTTCATTTCAAGGTGCCCATATATGAAATATCGAATTATACAGATGTGCATCTTACTTCAAAATTTTGCTTGCTTTTGTTTCTGATTAAATGATTGGCATTGAGGTTGAAGTTGTCCATTTTCTTGTGAATAAGAAATGAAACTTTTCATTGATGAAATGAAAATAGAATAATGCTCAAGAAATTCAAAACTCCATGGGGGAGAAAAAGCTGAAAACAGAAAGTAAAGTAATAGACAGCACAAAGTTACAGAAAAACTTCCCAATTGTTGCAAATAGTTTGAAAAGAGGTTGTCAGTTACATGCACATATTTGAACATTCATTTATGAAGAAATTTGATAGAAATTATAAAAAAAAAATGAAGAAACTTTATAGAAGGATTATAGTTAATCTTAATTAGTATTACTAAGGTTGTCAGTAGAGATTGGCAGAGCAGTTCACATCCGTTTGAAGTTGGCATTGGCAAGCGAAGTTATTTTTGGAGTGCAGGATGTTTCTTCCTTCAAGAATGGATTTCCTATTCTATTCAGCATTGTGTTGGCTCCTAATGGATCTGTTTTTTACTATTGGGTTGCTGTTTGTGGGTCTTGGAAAATATTTTCCAGAAATTTTTATTTTTAAAACAAGAAACAAAGTTCTAGGGAATTCTAAAGGAGGTGGAATTCAAAATTTGAGGATTTCTGAAGACCAGTTCTTATCTGGGAGGGAGCCTGTTGTTTTGTTCAAGCTTAACTCTTCTTGTTTTGTTCAAGCTTAA
mRNA sequence
ATGATTAAAAAGCAAAAGAATATAAAAAATCCCCTGGCAAATCGCCGAGGCAAAAACATTCGAGTCCAATGTGGTAAAACCCCAAGTAGGGTTCTAGCTTTGTTCAAATTCACCGGAGCGAACATTGTGCTGCAGAGTGCAGACCGGTGGATGAATCCGACAAGAAGGGAGAACATGGGGCGTAGGGTGCCACTGGCCGGAATGGAGACCTCTATAATGGCCACCGACGCTGTAGAATTCATTGATGTTTCTCTTCCTTCTTCCTCATTCAGAGATGCCGCCATTACTTCCGTTGCTTCACAAGCTAGCTCTTCATTGACTGAGGACCATGCCTCCTGCGCTGTCGTTGGAGATCCTCCAACCTATCTCATCTGGAGGATTCGGAAGACTCTACCTCGTGTGGTCGAGTTGCTTGAGTTTTCAACTGCCAACGAATTTCGTAGGATTGGTCTCCGAATTGCTTTTCCGGATGCACTTCACCCAGCCGTGTTTGTTTGCAAAAATGAGATTAGTTCGTCTACGGTATATCCTTTCTTGATGTACGCAGTGACTTCGTCCGGGGTCGCTTACTGTTTGAAGCTGAGAAATGTTTCCTCATACATTTCCTGCTCAGTCATCCCTCTTGATGAGGTTGTGGAGTTTAATTTGCAAACCCATCCAAACAACAAACCAGTAACCAGCGTATTTGCTGTATCTGGATGCCTCGTGATTGGGAGAAGTGATGGATCAGTTTCATGTTACAAACTTGGGTCGCTTGACCAACATACCCCTGGCTTTGAACATGAACTACGGGATGATTCAGGATTCAATCGTCTGTTGGGTTTCATTTCAAGGATGTTTCTTCCTTCAAGAATGGATTTCCTATTCTATTCAGCATTGTGTTGGCTCCTAATGGATCTGTTTTTTACTATTGGGTTGCTGTTTGTGGGTCTTGGAAAATATTTTCCAGAAATTTTTATTTTTAAAACAAGAAACAAAGTTCTAGGGAATTCTAAAGGAGGTGGAATTCAAAATTTGAGGATTTCTGAAGACCAGTTCTTATCTGGGAGGGAGCCTGTTGTTTTGTTCAAGCTTAACTCTTCTTGTTTTGTTCAAGCTTAA
Coding sequence (CDS)
ATGATTAAAAAGCAAAAGAATATAAAAAATCCCCTGGCAAATCGCCGAGGCAAAAACATTCGAGTCCAATGTGGTAAAACCCCAAGTAGGGTTCTAGCTTTGTTCAAATTCACCGGAGCGAACATTGTGCTGCAGAGTGCAGACCGGTGGATGAATCCGACAAGAAGGGAGAACATGGGGCGTAGGGTGCCACTGGCCGGAATGGAGACCTCTATAATGGCCACCGACGCTGTAGAATTCATTGATGTTTCTCTTCCTTCTTCCTCATTCAGAGATGCCGCCATTACTTCCGTTGCTTCACAAGCTAGCTCTTCATTGACTGAGGACCATGCCTCCTGCGCTGTCGTTGGAGATCCTCCAACCTATCTCATCTGGAGGATTCGGAAGACTCTACCTCGTGTGGTCGAGTTGCTTGAGTTTTCAACTGCCAACGAATTTCGTAGGATTGGTCTCCGAATTGCTTTTCCGGATGCACTTCACCCAGCCGTGTTTGTTTGCAAAAATGAGATTAGTTCGTCTACGGTATATCCTTTCTTGATGTACGCAGTGACTTCGTCCGGGGTCGCTTACTGTTTGAAGCTGAGAAATGTTTCCTCATACATTTCCTGCTCAGTCATCCCTCTTGATGAGGTTGTGGAGTTTAATTTGCAAACCCATCCAAACAACAAACCAGTAACCAGCGTATTTGCTGTATCTGGATGCCTCGTGATTGGGAGAAGTGATGGATCAGTTTCATGTTACAAACTTGGGTCGCTTGACCAACATACCCCTGGCTTTGAACATGAACTACGGGATGATTCAGGATTCAATCGTCTGTTGGGTTTCATTTCAAGGATGTTTCTTCCTTCAAGAATGGATTTCCTATTCTATTCAGCATTGTGTTGGCTCCTAATGGATCTGTTTTTTACTATTGGGTTGCTGTTTGTGGGTCTTGGAAAATATTTTCCAGAAATTTTTATTTTTAAAACAAGAAACAAAGTTCTAGGGAATTCTAAAGGAGGTGGAATTCAAAATTTGAGGATTTCTGAAGACCAGTTCTTATCTGGGAGGGAGCCTGTTGTTTTGTTCAAGCTTAACTCTTCTTGTTTTGTTCAAGCTTAA
Protein sequence
MIKKQKNIKNPLANRRGKNIRVQCGKTPSRVLALFKFTGANIVLQSADRWMNPTRRENMGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDHASCAVVGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEISSSTVYPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFAVSGCLVIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFYSALCWLLMDLFFTIGLLFVGLGKYFPEIFIFKTRNKVLGNSKGGGIQNLRISEDQFLSGREPVVLFKLNSSCFVQA
Homology
BLAST of Lag0028527 vs. NCBI nr
Match:
XP_023550112.1 (nuclear pore complex protein NUP160 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 403.3 bits (1035), Expect = 2.3e-108
Identity = 202/244 (82.79%), Postives = 218/244 (89.34%), Query Frame = 0
Query: 51 MNPTRRENMGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDH 110
M PTR ENMGRRVPLAGMETSIMATDAVEFIDVS+PSSS RD AITSVA A +S TEDH
Sbjct: 1 MKPTRTENMGRRVPLAGMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDH 60
Query: 111 ASCAVVGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEI 170
ASCAVVGDPPTYLIWRIRK P VVELL+FSTANEFRRIGLRIAFP+ LHPAVFVC NEI
Sbjct: 61 ASCAVVGDPPTYLIWRIRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEI 120
Query: 171 SSSTVYPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFA 230
SSST +PFLMYAVTSSG+AYCLKLRNVSSYISCSVIPLDEVVEFNL THP++KPVTSV A
Sbjct: 121 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 180
Query: 231 VSGCLVIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFY 290
+SGCLVIGR DGSVSC+KLGSLDQH+PGF+HELRDDSGFNRLLGFISR+ L + +
Sbjct: 181 ISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 240
Query: 291 SALC 295
S +C
Sbjct: 241 SEVC 244
BLAST of Lag0028527 vs. NCBI nr
Match:
XP_022969806.1 (nuclear pore complex protein NUP160 [Cucurbita maxima])
HSP 1 Score: 402.1 bits (1032), Expect = 5.0e-108
Identity = 200/244 (81.97%), Postives = 218/244 (89.34%), Query Frame = 0
Query: 51 MNPTRRENMGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDH 110
M PTR ENMGRRVPLAGMETSIMATDAVEFIDVS+PSSS RD AI S+A A +S TEDH
Sbjct: 1 MKPTRTENMGRRVPLAGMETSIMATDAVEFIDVSVPSSSLRDGAIASIAPPACTSFTEDH 60
Query: 111 ASCAVVGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEI 170
ASCAVVGDPPTYLIWRIRK P VVELL+FSTANEFRRIGLRIAFP+ LHPAVFVC NEI
Sbjct: 61 ASCAVVGDPPTYLIWRIRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCNNEI 120
Query: 171 SSSTVYPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFA 230
SSST +PFLMYAVTSSG+AYCLKLRNVSSYISCSVIPLDEVVEFNL THP++KPVTSV A
Sbjct: 121 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 180
Query: 231 VSGCLVIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFY 290
+SGCLVIGR+DGSVSC+KLGSLDQH+PGF+HELRDDSGFNRLLGFISR+ L + +
Sbjct: 181 ISGCLVIGRNDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 240
Query: 291 SALC 295
S +C
Sbjct: 241 SEVC 244
BLAST of Lag0028527 vs. NCBI nr
Match:
KAG7017151.1 (Nuclear pore complex protein [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 395.6 bits (1015), Expect = 4.7e-106
Identity = 198/244 (81.15%), Postives = 216/244 (88.52%), Query Frame = 0
Query: 51 MNPTRRENMGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDH 110
M PT ENMGR VPLAGMETSIMATDAVEFIDVS+PSSS RD AITSVA A +S TEDH
Sbjct: 1 MKPTTTENMGRPVPLAGMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDH 60
Query: 111 ASCAVVGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEI 170
ASCAVVGDPPTYLIWRIRK P VVELL+FSTANEFRRIGLRIAFP+ LHPAVFVC NEI
Sbjct: 61 ASCAVVGDPPTYLIWRIRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCNNEI 120
Query: 171 SSSTVYPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFA 230
SSST +PFLMYAVTSSG+AYCLKLRNVSSYISCSVIPLDEVVEFNL THP++KPVTSV A
Sbjct: 121 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 180
Query: 231 VSGCLVIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFY 290
+SGCLVIGR+DGSVSC+KLGSLD H+PGF+H+LRDDSGFNRLLGFISR+ L + +
Sbjct: 181 ISGCLVIGRNDGSVSCFKLGSLDLHSPGFQHDLRDDSGFNRLLGFISRVKLAGAVHDMVI 240
Query: 291 SALC 295
S +C
Sbjct: 241 SEVC 244
BLAST of Lag0028527 vs. NCBI nr
Match:
KAG6579709.1 (Nuclear pore complex protein 160, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 395.2 bits (1014), Expect = 6.1e-106
Identity = 198/244 (81.15%), Postives = 216/244 (88.52%), Query Frame = 0
Query: 51 MNPTRRENMGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDH 110
M PT ENMGR VPLAGMETSIMATDAVEFIDVS+PSSS RD AITSVA A +S TEDH
Sbjct: 1 MKPTTTENMGRPVPLAGMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDH 60
Query: 111 ASCAVVGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEI 170
ASCAVVGDPPTYLIWRIRK P VVELL+FSTANEFRRIGLRIAFP+ LHPAVFVC NEI
Sbjct: 61 ASCAVVGDPPTYLIWRIRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCHNEI 120
Query: 171 SSSTVYPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFA 230
SSST +PFLMYAVTSSG+AYCLKLRNVSSYISCSVIPLDEVVEFNL THP++KPVTSV A
Sbjct: 121 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 180
Query: 231 VSGCLVIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFY 290
+SGCLVIGR+DGSVSC+KLGSLD H+PGF+H+LRDDSGFNRLLGFISR+ L + +
Sbjct: 181 ISGCLVIGRNDGSVSCFKLGSLDLHSPGFQHDLRDDSGFNRLLGFISRVKLAGAVHDMVI 240
Query: 291 SALC 295
S +C
Sbjct: 241 SEVC 244
BLAST of Lag0028527 vs. NCBI nr
Match:
XP_022928856.1 (nuclear pore complex protein NUP160 [Cucurbita moschata])
HSP 1 Score: 393.3 bits (1009), Expect = 2.3e-105
Identity = 199/244 (81.56%), Postives = 216/244 (88.52%), Query Frame = 0
Query: 51 MNPTRRENMGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDH 110
M PTR ENMGRRVPL GMETSIMATDAVEF DVS+PSSS RD AITSVA A +S TEDH
Sbjct: 1 MKPTRTENMGRRVPLTGMETSIMATDAVEF-DVSVPSSSLRDGAITSVAPPACTSFTEDH 60
Query: 111 ASCAVVGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEI 170
ASCAVVGDPPTYLIWRIRK P VVELL+FSTANEFRRIGLRIAFP+ LHPAVFVC NEI
Sbjct: 61 ASCAVVGDPPTYLIWRIRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEI 120
Query: 171 SSSTVYPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFA 230
SSST +PFLMYAVTSSG+AYCLKLRNVSSYISCSVIPLDEVVEFNL TH ++KPVTSV A
Sbjct: 121 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHQDSKPVTSVSA 180
Query: 231 VSGCLVIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFY 290
+SGCLVIGR+DGSVSC+KLGSLDQH+PGF+HELRDDSGFNRLLGFISR+ L + +
Sbjct: 181 ISGCLVIGRNDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 240
Query: 291 SALC 295
S +C
Sbjct: 241 SEVC 243
BLAST of Lag0028527 vs. ExPASy Swiss-Prot
Match:
Q9C811 (Nuclear pore complex protein NUP160 OS=Arabidopsis thaliana OX=3702 GN=NUP160 PE=1 SV=2)
HSP 1 Score: 153.7 bits (387), Expect = 4.1e-36
Identity = 88/217 (40.55%), Postives = 128/217 (58.99%), Query Frame = 0
Query: 61 RRVPLAGMETSIM-ATDAVEFIDVSLPSSSFRDAAITSVASQASS----SLTEDHASCAV 120
RR P AGME + + V++I++S+PS S ++I + +S+ + L+ED+AS +V
Sbjct: 5 RRNPSAGMEVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSV 64
Query: 121 VGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEISSSTV 180
+G+P +WRI KT P +ELL+ S + F GLR F L P FV +E S
Sbjct: 65 IGEPSISFVWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEGGDSGR 124
Query: 181 YPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFAVSGCL 240
+ +Y++T SGV Y LKL N +Y S SV PLD ++ +++ + N VTSV A G +
Sbjct: 125 LVYFLYSLTPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYLNESRVTSVAASPGFI 184
Query: 241 VIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRL 273
+GRSDG VSC++ Q + GF ELRDD+GF RL
Sbjct: 185 FLGRSDGCVSCFQPIVYFQKSSGFHQELRDDTGFGRL 221
BLAST of Lag0028527 vs. ExPASy TrEMBL
Match:
A0A6J1HYU1 (nuclear pore complex protein NUP160 OS=Cucurbita maxima OX=3661 GN=LOC111468896 PE=4 SV=1)
HSP 1 Score: 402.1 bits (1032), Expect = 2.4e-108
Identity = 200/244 (81.97%), Postives = 218/244 (89.34%), Query Frame = 0
Query: 51 MNPTRRENMGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDH 110
M PTR ENMGRRVPLAGMETSIMATDAVEFIDVS+PSSS RD AI S+A A +S TEDH
Sbjct: 1 MKPTRTENMGRRVPLAGMETSIMATDAVEFIDVSVPSSSLRDGAIASIAPPACTSFTEDH 60
Query: 111 ASCAVVGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEI 170
ASCAVVGDPPTYLIWRIRK P VVELL+FSTANEFRRIGLRIAFP+ LHPAVFVC NEI
Sbjct: 61 ASCAVVGDPPTYLIWRIRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCNNEI 120
Query: 171 SSSTVYPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFA 230
SSST +PFLMYAVTSSG+AYCLKLRNVSSYISCSVIPLDEVVEFNL THP++KPVTSV A
Sbjct: 121 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 180
Query: 231 VSGCLVIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFY 290
+SGCLVIGR+DGSVSC+KLGSLDQH+PGF+HELRDDSGFNRLLGFISR+ L + +
Sbjct: 181 ISGCLVIGRNDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 240
Query: 291 SALC 295
S +C
Sbjct: 241 SEVC 244
BLAST of Lag0028527 vs. ExPASy TrEMBL
Match:
A0A6J1ELG7 (nuclear pore complex protein NUP160 OS=Cucurbita moschata OX=3662 GN=LOC111435647 PE=4 SV=1)
HSP 1 Score: 393.3 bits (1009), Expect = 1.1e-105
Identity = 199/244 (81.56%), Postives = 216/244 (88.52%), Query Frame = 0
Query: 51 MNPTRRENMGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDH 110
M PTR ENMGRRVPL GMETSIMATDAVEF DVS+PSSS RD AITSVA A +S TEDH
Sbjct: 1 MKPTRTENMGRRVPLTGMETSIMATDAVEF-DVSVPSSSLRDGAITSVAPPACTSFTEDH 60
Query: 111 ASCAVVGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEI 170
ASCAVVGDPPTYLIWRIRK P VVELL+FSTANEFRRIGLRIAFP+ LHPAVFVC NEI
Sbjct: 61 ASCAVVGDPPTYLIWRIRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEI 120
Query: 171 SSSTVYPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFA 230
SSST +PFLMYAVTSSG+AYCLKLRNVSSYISCSVIPLDEVVEFNL TH ++KPVTSV A
Sbjct: 121 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHQDSKPVTSVSA 180
Query: 231 VSGCLVIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFY 290
+SGCLVIGR+DGSVSC+KLGSLDQH+PGF+HELRDDSGFNRLLGFISR+ L + +
Sbjct: 181 ISGCLVIGRNDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 240
Query: 291 SALC 295
S +C
Sbjct: 241 SEVC 243
BLAST of Lag0028527 vs. ExPASy TrEMBL
Match:
A0A5D3B8G5 (Nuclear pore complex protein NUP160 isoform X5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00820 PE=4 SV=1)
HSP 1 Score: 388.7 bits (997), Expect = 2.8e-104
Identity = 194/236 (82.20%), Postives = 213/236 (90.25%), Query Frame = 0
Query: 59 MGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDHASCAVVGD 118
MGRR+PLAGMETS+MA D+VEFI VS+PSSS RDA+ITSVASQA++SLTEDHASC VVGD
Sbjct: 1 MGRRMPLAGMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGD 60
Query: 119 PPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEISSSTVYPF 178
PPTYLIW IRK LP VVELLEFST+NEFRRIGLRIAFP+ LHPAVFVCKNEISSS +PF
Sbjct: 61 PPTYLIWSIRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
Query: 179 LMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFAVSGCLVIG 238
LMYAVTSSG AYCLKLRN+SSY+S S IPLDEVVEFNLQTHP+NKPVTSV A+SGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
Query: 239 RSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFYSALC 295
R+DGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISR+ L + + S +C
Sbjct: 181 RNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRVKLAGAVQDMVISEVC 236
BLAST of Lag0028527 vs. ExPASy TrEMBL
Match:
A0A1S3C516 (nuclear pore complex protein NUP160 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103496931 PE=4 SV=1)
HSP 1 Score: 388.7 bits (997), Expect = 2.8e-104
Identity = 194/236 (82.20%), Postives = 213/236 (90.25%), Query Frame = 0
Query: 59 MGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDHASCAVVGD 118
MGRR+PLAGMETS+MA D+VEFI VS+PSSS RDA+ITSVASQA++SLTEDHASC VVGD
Sbjct: 1 MGRRMPLAGMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGD 60
Query: 119 PPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEISSSTVYPF 178
PPTYLIW IRK LP VVELLEFST+NEFRRIGLRIAFP+ LHPAVFVCKNEISSS +PF
Sbjct: 61 PPTYLIWSIRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
Query: 179 LMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFAVSGCLVIG 238
LMYAVTSSG AYCLKLRN+SSY+S S IPLDEVVEFNLQTHP+NKPVTSV A+SGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
Query: 239 RSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFYSALC 295
R+DGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISR+ L + + S +C
Sbjct: 181 RNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRVKLAGAVQDMVISEVC 236
BLAST of Lag0028527 vs. ExPASy TrEMBL
Match:
A0A1S3C4Y2 (nuclear pore complex protein NUP160 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496931 PE=4 SV=1)
HSP 1 Score: 388.7 bits (997), Expect = 2.8e-104
Identity = 194/236 (82.20%), Postives = 213/236 (90.25%), Query Frame = 0
Query: 59 MGRRVPLAGMETSIMATDAVEFIDVSLPSSSFRDAAITSVASQASSSLTEDHASCAVVGD 118
MGRR+PLAGMETS+MA D+VEFI VS+PSSS RDA+ITSVASQA++SLTEDHASC VVGD
Sbjct: 1 MGRRMPLAGMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGD 60
Query: 119 PPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEISSSTVYPF 178
PPTYLIW IRK LP VVELLEFST+NEFRRIGLRIAFP+ LHPAVFVCKNEISSS +PF
Sbjct: 61 PPTYLIWSIRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
Query: 179 LMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFAVSGCLVIG 238
LMYAVTSSG AYCLKLRN+SSY+S S IPLDEVVEFNLQTHP+NKPVTSV A+SGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
Query: 239 RSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRMFLPSRMDFLFYSALC 295
R+DGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISR+ L + + S +C
Sbjct: 181 RNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRVKLAGAVQDMVISEVC 236
BLAST of Lag0028527 vs. TAIR 10
Match:
AT1G33410.2 (SUPPRESSOR OF AUXIN RESISTANCE1 )
HSP 1 Score: 158.7 bits (400), Expect = 9.0e-39
Identity = 90/221 (40.72%), Postives = 131/221 (59.28%), Query Frame = 0
Query: 61 RRVPLAGMETSIM-ATDAVEFIDVSLPSSSFRDAAITSVASQASS----SLTEDHASCAV 120
RR P AGME + + V++I++S+PS S ++I + +S+ + L+ED+AS +V
Sbjct: 5 RRNPSAGMEVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSV 64
Query: 121 VGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEISSSTV 180
+G+P +WRI KT P +ELL+ S + F GLR F L P FV +E S
Sbjct: 65 IGEPSISFVWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEGGDSGR 124
Query: 181 YPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFAVSGCL 240
+ +Y++T SGV Y LKL N +Y S SV PLD ++ +++ + N VTSV A G +
Sbjct: 125 LVYFLYSLTPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYLNESRVTSVAASPGFI 184
Query: 241 VIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFI 277
+GRSDG VSC++ Q + GF ELRDD+GF RL GF+
Sbjct: 185 FLGRSDGCVSCFQPIVYFQKSSGFHQELRDDTGFGRLWGFV 225
BLAST of Lag0028527 vs. TAIR 10
Match:
AT1G33410.1 (SUPPRESSOR OF AUXIN RESISTANCE1 )
HSP 1 Score: 153.7 bits (387), Expect = 2.9e-37
Identity = 88/217 (40.55%), Postives = 128/217 (58.99%), Query Frame = 0
Query: 61 RRVPLAGMETSIM-ATDAVEFIDVSLPSSSFRDAAITSVASQASS----SLTEDHASCAV 120
RR P AGME + + V++I++S+PS S ++I + +S+ + L+ED+AS +V
Sbjct: 5 RRNPSAGMEVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSV 64
Query: 121 VGDPPTYLIWRIRKTLPRVVELLEFSTANEFRRIGLRIAFPDALHPAVFVCKNEISSSTV 180
+G+P +WRI KT P +ELL+ S + F GLR F L P FV +E S
Sbjct: 65 IGEPSISFVWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEGGDSGR 124
Query: 181 YPFLMYAVTSSGVAYCLKLRNVSSYISCSVIPLDEVVEFNLQTHPNNKPVTSVFAVSGCL 240
+ +Y++T SGV Y LKL N +Y S SV PLD ++ +++ + N VTSV A G +
Sbjct: 125 LVYFLYSLTPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYLNESRVTSVAASPGFI 184
Query: 241 VIGRSDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRL 273
+GRSDG VSC++ Q + GF ELRDD+GF RL
Sbjct: 185 FLGRSDGCVSCFQPIVYFQKSSGFHQELRDDTGFGRL 221
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023550112.1 | 2.3e-108 | 82.79 | nuclear pore complex protein NUP160 [Cucurbita pepo subsp. pepo] | [more] |
XP_022969806.1 | 5.0e-108 | 81.97 | nuclear pore complex protein NUP160 [Cucurbita maxima] | [more] |
KAG7017151.1 | 4.7e-106 | 81.15 | Nuclear pore complex protein [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6579709.1 | 6.1e-106 | 81.15 | Nuclear pore complex protein 160, partial [Cucurbita argyrosperma subsp. sororia... | [more] |
XP_022928856.1 | 2.3e-105 | 81.56 | nuclear pore complex protein NUP160 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q9C811 | 4.1e-36 | 40.55 | Nuclear pore complex protein NUP160 OS=Arabidopsis thaliana OX=3702 GN=NUP160 PE... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HYU1 | 2.4e-108 | 81.97 | nuclear pore complex protein NUP160 OS=Cucurbita maxima OX=3661 GN=LOC111468896 ... | [more] |
A0A6J1ELG7 | 1.1e-105 | 81.56 | nuclear pore complex protein NUP160 OS=Cucurbita moschata OX=3662 GN=LOC11143564... | [more] |
A0A5D3B8G5 | 2.8e-104 | 82.20 | Nuclear pore complex protein NUP160 isoform X5 OS=Cucumis melo var. makuwa OX=11... | [more] |
A0A1S3C516 | 2.8e-104 | 82.20 | nuclear pore complex protein NUP160 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103... | [more] |
A0A1S3C4Y2 | 2.8e-104 | 82.20 | nuclear pore complex protein NUP160 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103... | [more] |