Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAACCACCCATGACAACACAATTTCAGTAGATAGAGTGATGCTACTCTATTGTCTTATGAAGGGGTTGGAGATCAACGTAGGAAGCATCATCAAAGATGAGATCTTAGCCTGTGGACGAAAAAGGGCAGGCAAGCTTTTCTTTGGCTCACTCATCACCCAACTCTGTCAGAGGGTGAAGATTGTGTCAGGCAAGGACGAGGAGCGCCATTTCTTTAAACCAACTATTGACTTGTCCTTGATAGGGAAGCTCCAGAACAACATCCAGAGGAAGGATAAAGCCTCCACATCACAGGCCACACCTCAATCAGAGTCGAATGTAGCCTCTCCATCCCAGCACACTCATTTTACAGGACCTTCACCAGCATCAGAAGCCCTAGGCATGGTCCACCACCAACTTGATCGAATCAGGGAGAACCTAAAGACTTACTGGACGTATGCCAAGGAGAGGGATGAAGCTATAAGAGAGTTCTATCTCTCTATCGCCCCAAGCATTGCTCCGGTCTTTCCAAATTTCCCTCAGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGAAGAAAGAGAGAGTTCCTCGGACGAGGAATAG
mRNA sequence
ATGCCAACCACCCATGACAACACAATTTCAGTAGATAGAGTGATGCTACTCTATTGTCTTATGAAGGGGTTGGAGATCAACGTAGGAAGCATCATCAAAGATGAGATCTTAGCCTGTGGACGAAAAAGGGCAGGCAAGCTTTTCTTTGGCTCACTCATCACCCAACTCTGTCAGAGGGTGAAGATTGTGTCAGGCAAGGACGAGGAGCGCCATTTCTTTAAACCAACTATTGACTTGTCCTTGATAGGGAAGCTCCAGAACAACATCCAGAGGAAGGATAAAGCCTCCACATCACAGGCCACACCTCAATCAGAGTCGAATGTAGCCTCTCCATCCCAGCACACTCATTTTACAGGACCTTCACCAGCATCAGAAGCCCTAGGCATGGTCCACCACCAACTTGATCGAATCAGGGAGAACCTAAAGACTTACTGGACGTATGCCAAGGAGAGGGATGAAGCTATAAGAGAGTTCTATCTCTCTATCGCCCCAAGCATTGCTCCGGTCTTTCCAAATTTCCCTCAGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGAAGAAAGAGAGAGTTCCTCGGACGAGGAATAG
Coding sequence (CDS)
ATGCCAACCACCCATGACAACACAATTTCAGTAGATAGAGTGATGCTACTCTATTGTCTTATGAAGGGGTTGGAGATCAACGTAGGAAGCATCATCAAAGATGAGATCTTAGCCTGTGGACGAAAAAGGGCAGGCAAGCTTTTCTTTGGCTCACTCATCACCCAACTCTGTCAGAGGGTGAAGATTGTGTCAGGCAAGGACGAGGAGCGCCATTTCTTTAAACCAACTATTGACTTGTCCTTGATAGGGAAGCTCCAGAACAACATCCAGAGGAAGGATAAAGCCTCCACATCACAGGCCACACCTCAATCAGAGTCGAATGTAGCCTCTCCATCCCAGCACACTCATTTTACAGGACCTTCACCAGCATCAGAAGCCCTAGGCATGGTCCACCACCAACTTGATCGAATCAGGGAGAACCTAAAGACTTACTGGACGTATGCCAAGGAGAGGGATGAAGCTATAAGAGAGTTCTATCTCTCTATCGCCCCAAGCATTGCTCCGGTCTTTCCAAATTTCCCTCAGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGAAGAAAGAGAGAGTTCCTCGGACGAGGAATAG
Protein sequence
MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRAGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGKLQNNIQRKDKASTSQATPQSESNVASPSQHTHFTGPSPASEALGMVHHQLDRIRENLKTYWTYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEEEDSDEEEDEENEERESSSDEE
Homology
BLAST of Lag0028525 vs. NCBI nr
Match:
PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])
HSP 1 Score: 90.9 bits (224), Expect = 1.4e-14
Identity = 65/204 (31.86%), Postives = 102/204 (50.00%), Query Frame = 0
Query: 1 MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRAGKLFFGSLITQLCQRV 60
+PTTH T+S DR++LLY ++ G INVG +I EI AC +++G LFF SLITQLC+
Sbjct: 57 LPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNA 116
Query: 61 KIVSGKDEERHFFKPTIDLSLIGKL--QNNIQRKDKASTSQATPQSESNVASPSQHTHFT 120
+ +EE+ ID + ++ + + + STS+ T S S
Sbjct: 117 RAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDILQQLKA 176
Query: 121 GPSPASEALGMVHHQLDRIRENLK---TYWTYAKERDEAIREFYLSIAPSIAPVFPNFPQ 180
S+ +H + ++ K +W Y+KERD A+++ + P FP FPQ
Sbjct: 177 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQ 236
Query: 181 SLLP--QEEEDSDEEEDEENEERE 198
LL E +++ ++D NE E
Sbjct: 237 ELLQDLDYEYEAESDKDGSNEAAE 260
BLAST of Lag0028525 vs. NCBI nr
Match:
KAF4375842.1 (hypothetical protein G4B88_026421 [Cannabis sativa])
HSP 1 Score: 83.6 bits (205), Expect = 2.2e-12
Identity = 50/152 (32.89%), Postives = 73/152 (48.03%), Query Frame = 0
Query: 1 MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRAGKLFFGSLITQLCQRV 60
+PT+HD+T+S +R+ +LYC++KG +INVG +I EI C + GKLFF LIT+ C+
Sbjct: 886 LPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHRVKGKLFFSCLITEKCRCA 945
Query: 61 KIVSGKDEERHFFKPTIDLSLIGKLQNNIQRKDKASTSQATPQSESNVASPSQHTHFTGP 120
+ DE+ + RK S P +PS T T
Sbjct: 946 NVPMLNDED------------------PVPRKGVVSFE---PDRAPKRTTPSTTTASTSR 1005
Query: 121 SPASEALGMVHHQLDRIRENLKTYWTYAKERD 153
P E L ++ E L+T+W Y +ERD
Sbjct: 1006 DPMDERLSKHEALQQQMCERLQTHWNYERERD 1016
BLAST of Lag0028525 vs. NCBI nr
Match:
PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])
HSP 1 Score: 80.9 bits (198), Expect = 1.4e-11
Identity = 64/199 (32.16%), Postives = 100/199 (50.25%), Query Frame = 0
Query: 1 MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRAGKLFFGSLITQLCQRV 60
+PTTH +S DR++LL+ ++ G INVG +I EI AC ++ G LFF SLIT+LC+
Sbjct: 116 LPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNA 175
Query: 61 KIVSGKDEERHFFKPTIDLSLIGKLQNNIQRKDKASTSQATPQSESNVASPSQHTHFTGP 120
+ +EE+ ID + ++ Q ST Q P S A+ S T+
Sbjct: 176 PFL--VNEEKLHNTGEIDAIAVARI---TQEGPTESTQQ--PSSSRPAAASSSRTN-GDV 235
Query: 121 SPASEALGMVHHQLDRIRENLKTYWTYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLP- 180
+AL Q + + + +W Y+KERD A+++ + P FP FPQ +L
Sbjct: 236 LQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQD 295
Query: 181 -QEEEDSDEEEDEENEERE 198
E +++ ++D NE E
Sbjct: 296 LDYEYEAESDKDGSNEAAE 306
BLAST of Lag0028525 vs. NCBI nr
Match:
PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])
HSP 1 Score: 80.1 bits (196), Expect = 2.4e-11
Identity = 60/204 (29.41%), Postives = 98/204 (48.04%), Query Frame = 0
Query: 1 MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRAGKLFFGSLITQLCQRV 60
+PTTH T+S DR++LL+ ++ G INVG +I EI AC ++ G LFF SLIT+LC+
Sbjct: 186 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNA 245
Query: 61 KIVSGKDEERHFFKPTIDLSLIGKLQN---NIQRKDKASTSQATPQSESNVASPSQHTHF 120
+ +EE+ ID + ++ + +S+ AT S Q
Sbjct: 246 RAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKA 305
Query: 121 TGPSPASEALGMVHHQ--LDRIRENLKTYWTYAKERDEAIREFYLSIAPSIAPVFPNFPQ 180
+ + + H L + + +W Y+KERD A+++ + P FP FPQ
Sbjct: 306 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQ 365
Query: 181 SLLP--QEEEDSDEEEDEENEERE 198
+L E +++ ++D NE E
Sbjct: 366 EILKDLDYEYEAESDKDGSNEAAE 389
BLAST of Lag0028525 vs. NCBI nr
Match:
MCI09484.1 (hypothetical protein [Trifolium medium])
HSP 1 Score: 78.2 bits (191), Expect = 9.2e-11
Identity = 54/153 (35.29%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 1 MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRA--GKLFFGSLITQLCQ 60
MPTTH+ T++ R++LL+C++ G +INVG II EI+ C K++ G L+F LIT+LC+
Sbjct: 40 MPTTHNETVNKARLVLLHCIIAGQKINVGRIIHQEIVNCSAKKSNEGMLYFPCLITELCK 99
Query: 61 RVKI-VSGKDEERHFFKPTIDL---SLIGKLQNNIQRKDKASTSQATPQSESNVASPSQH 120
+ + VSG+DE F+PT ++ L+ N RK + Q P++ ++ A+ SQ
Sbjct: 100 KNLVHVSGRDE---VFQPTNSFDQKAIETLLKGNTGRKPR----QQLPEATTSAAAVSQ- 159
Query: 121 THFTGPSPASEALGMVHHQLDRIRENLKTYWTY 148
A +A + + R+N+KTYW +
Sbjct: 160 --------AVDA-----EEFMKFRKNMKTYWAW 171
BLAST of Lag0028525 vs. ExPASy TrEMBL
Match:
A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 6.6e-15
Identity = 65/204 (31.86%), Postives = 102/204 (50.00%), Query Frame = 0
Query: 1 MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRAGKLFFGSLITQLCQRV 60
+PTTH T+S DR++LLY ++ G INVG +I EI AC +++G LFF SLITQLC+
Sbjct: 57 LPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNA 116
Query: 61 KIVSGKDEERHFFKPTIDLSLIGKL--QNNIQRKDKASTSQATPQSESNVASPSQHTHFT 120
+ +EE+ ID + ++ + + + STS+ T S S
Sbjct: 117 RAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDILQQLKA 176
Query: 121 GPSPASEALGMVHHQLDRIRENLK---TYWTYAKERDEAIREFYLSIAPSIAPVFPNFPQ 180
S+ +H + ++ K +W Y+KERD A+++ + P FP FPQ
Sbjct: 177 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQ 236
Query: 181 SLLP--QEEEDSDEEEDEENEERE 198
LL E +++ ++D NE E
Sbjct: 237 ELLQDLDYEYEAESDKDGSNEAAE 260
BLAST of Lag0028525 vs. ExPASy TrEMBL
Match:
A0A7J6FZ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 1.1e-12
Identity = 50/152 (32.89%), Postives = 73/152 (48.03%), Query Frame = 0
Query: 1 MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRAGKLFFGSLITQLCQRV 60
+PT+HD+T+S +R+ +LYC++KG +INVG +I EI C + GKLFF LIT+ C+
Sbjct: 886 LPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHRVKGKLFFSCLITEKCRCA 945
Query: 61 KIVSGKDEERHFFKPTIDLSLIGKLQNNIQRKDKASTSQATPQSESNVASPSQHTHFTGP 120
+ DE+ + RK S P +PS T T
Sbjct: 946 NVPMLNDED------------------PVPRKGVVSFE---PDRAPKRTTPSTTTASTSR 1005
Query: 121 SPASEALGMVHHQLDRIRENLKTYWTYAKERD 153
P E L ++ E L+T+W Y +ERD
Sbjct: 1006 DPMDERLSKHEALQQQMCERLQTHWNYERERD 1016
BLAST of Lag0028525 vs. ExPASy TrEMBL
Match:
A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)
HSP 1 Score: 80.9 bits (198), Expect = 6.9e-12
Identity = 64/199 (32.16%), Postives = 100/199 (50.25%), Query Frame = 0
Query: 1 MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRAGKLFFGSLITQLCQRV 60
+PTTH +S DR++LL+ ++ G INVG +I EI AC ++ G LFF SLIT+LC+
Sbjct: 116 LPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNA 175
Query: 61 KIVSGKDEERHFFKPTIDLSLIGKLQNNIQRKDKASTSQATPQSESNVASPSQHTHFTGP 120
+ +EE+ ID + ++ Q ST Q P S A+ S T+
Sbjct: 176 PFL--VNEEKLHNTGEIDAIAVARI---TQEGPTESTQQ--PSSSRPAAASSSRTN-GDV 235
Query: 121 SPASEALGMVHHQLDRIRENLKTYWTYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLP- 180
+AL Q + + + +W Y+KERD A+++ + P FP FPQ +L
Sbjct: 236 LQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQD 295
Query: 181 -QEEEDSDEEEDEENEERE 198
E +++ ++D NE E
Sbjct: 296 LDYEYEAESDKDGSNEAAE 306
BLAST of Lag0028525 vs. ExPASy TrEMBL
Match:
A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11
Identity = 60/204 (29.41%), Postives = 98/204 (48.04%), Query Frame = 0
Query: 1 MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRAGKLFFGSLITQLCQRV 60
+PTTH T+S DR++LL+ ++ G INVG +I EI AC ++ G LFF SLIT+LC+
Sbjct: 186 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNA 245
Query: 61 KIVSGKDEERHFFKPTIDLSLIGKLQN---NIQRKDKASTSQATPQSESNVASPSQHTHF 120
+ +EE+ ID + ++ + +S+ AT S Q
Sbjct: 246 RAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKA 305
Query: 121 TGPSPASEALGMVHHQ--LDRIRENLKTYWTYAKERDEAIREFYLSIAPSIAPVFPNFPQ 180
+ + + H L + + +W Y+KERD A+++ + P FP FPQ
Sbjct: 306 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQ 365
Query: 181 SLLP--QEEEDSDEEEDEENEERE 198
+L E +++ ++D NE E
Sbjct: 366 EILKDLDYEYEAESDKDGSNEAAE 389
BLAST of Lag0028525 vs. ExPASy TrEMBL
Match:
A0A392PCH7 (Uncharacterized protein OS=Trifolium medium OX=97028 PE=4 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 4.5e-11
Identity = 54/153 (35.29%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 1 MPTTHDNTISVDRVMLLYCLMKGLEINVGSIIKDEILACGRKRA--GKLFFGSLITQLCQ 60
MPTTH+ T++ R++LL+C++ G +INVG II EI+ C K++ G L+F LIT+LC+
Sbjct: 40 MPTTHNETVNKARLVLLHCIIAGQKINVGRIIHQEIVNCSAKKSNEGMLYFPCLITELCK 99
Query: 61 RVKI-VSGKDEERHFFKPTIDL---SLIGKLQNNIQRKDKASTSQATPQSESNVASPSQH 120
+ + VSG+DE F+PT ++ L+ N RK + Q P++ ++ A+ SQ
Sbjct: 100 KNLVHVSGRDE---VFQPTNSFDQKAIETLLKGNTGRKPR----QQLPEATTSAAAVSQ- 159
Query: 121 THFTGPSPASEALGMVHHQLDRIRENLKTYWTY 148
A +A + + R+N+KTYW +
Sbjct: 160 --------AVDA-----EEFMKFRKNMKTYWAW 171
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PON59596.1 | 1.4e-14 | 31.86 | hypothetical protein PanWU01x14_158080 [Parasponia andersonii] | [more] |
KAF4375842.1 | 2.2e-12 | 32.89 | hypothetical protein G4B88_026421 [Cannabis sativa] | [more] |
PON78020.1 | 1.4e-11 | 32.16 | hypothetical protein PanWU01x14_023740 [Parasponia andersonii] | [more] |
PON46472.1 | 2.4e-11 | 29.41 | hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii] | [more] |
MCI09484.1 | 9.2e-11 | 35.29 | hypothetical protein [Trifolium medium] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2P5CEY2 | 6.6e-15 | 31.86 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... | [more] |
A0A7J6FZ22 | 1.1e-12 | 32.89 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1 | [more] |
A0A2P5DXM3 | 6.9e-12 | 32.16 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... | [more] |
A0A2P5BCG4 | 1.2e-11 | 29.41 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A392PCH7 | 4.5e-11 | 35.29 | Uncharacterized protein OS=Trifolium medium OX=97028 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |