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Lag0028518 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGGTCAAAGAGATAATCTCAATCCAGACACAGTTCGAAGTGGGAACGTGGAGAATGCCGCAATGCACGGTCCTCGAGCACAAATTGTGTTAACACCTGAAATCCTTCAAGAATTATCAAACTTGAAGGGACAACAGGTGAGTTACAAAATTCTTTGGGGCGAGTACAAATCTTGGTACAAACCTTGACGCAAAGAATGAATCTAATGGAGCTTGAACAAGGAAGAGAACCTATACCCATTAATAGACTGATGCAAGAAAGAATAGTGGATTTTGAATTTCCAAGACAACATCAAGAACGTGGATATCTTCCACCTATCAATATGCAGGGTGCTATCCAAAATCCAAGAAACAGAAGATTTCAAGAAAATTTTGATGAATTTGACGAAGAAGGAGAAATTAATCAAATCGATCCACCATATGGGAACCAAAGACAGAATCATTGGAATGACCGACAATATGGAGAGCCAAATTACAAAATGAAGATTGATTTACCAGTTTTTGATGGGAAGTTAGATGCTGAATTTTTTCTTGATTGGATTTGAAAATAAGAAAGTACAACTAGTTACCTTAAAATTAAAAGGGGTGCATCTGCCTGATGGGAACAATTCCAAACAAACAGAGAAAGAATAGGAAATTTTCCCATTCGAACATGGCCTAGGATGAAAGAACTCCTTAAAGAACGATTTCTACCAAAAAGTTACGAGCACAAATTATTTACAAAATACCAAAACTGTAAACAAGGGTTTAGAACCGTAACCGAATATTCTGAGGAATTTTACAGATTAAATGCTCGTAACAATTTAGTAGAAAGCAATCAACAACAAGTTGCAAGATATATTTCAGGCCCAAAGAAACAAATAAAAGATCAACTAAATTTACAAAACCCAAATGTCCTAGCTGAAGCAGTTTCATTGGCTGAAACATTGGAAGAACAATTAGATACAACTCCCCCAAAACAACAATTTCTAAAAAATAGAATTGAGAAACAATCTCATAATTGGAACAAAAAGGACAGTGCTTACCATGAGTTTGAACAAGGCTCCACTTCTAATGTTAATAAAGGAAAAAATCCAGTAGCTTATAAACCCATAGGTGACGATAGACTAACTGAAAATCAACCAAACAATCAAGATCTTAGAAAGTCAGTCAATCCATATGCTAAACCAACACCAAATAAATATTATAGATGTGGAAAACAAGGACATATTTCTAATCAGTGCCCAGCAAGAAAACAAATTGCAATAATGGAAGAATGTGTGAATGAAGATGATGATATTAATGATGATAATGAAGGAGAGGAAGAAATTGAATATGCTAAGGGTGATGAAGGAGAACAATTAAATTGTGTTGTTCAACGAATTTTACTAACACCAAAAATAGAAACTCATCCTCAACGACATTCCTTGTTTAGAACTAAGTGTACTATCATGGGAAAAGTGTGTAATGGAACTCATTCAGATATGTTCAGACGCATAATCTGCCTCCTTTAAACTCTCCACACTTATGTTATCTTCTTCTTTCCACCTTTTTGTTTTCCTTTAAAGGGTTTTAAGATTTCTTTGAAAGACTTCATGAGCAGAAGAACCAAAGCTCAAAATTTAGAACAACTTCAAACAGTTTGACAAACAAACAATGGGTATTGATCAAATTGGTTTCTCCTGGATGCTCATTTTTTTTTCTTCAGTCAAGAACTTGACAGTTTGGTCTGTTGGGATGTGATATAATTCTGATTTGGTGTTCATTGTATAATTGTAGATCAATCTCTCTCTAATGCTGAAGAATGAGTTGTTGTTGCCTTTGAATCTTATCAATGCTTTGCATGGAAGTACAGAGGGGAAGTACAGAGGGGAAAAGTCTCTGTTGAATTAA ATGACTGGTCAAAGAGATAATCTCAATCCAGACACAGTTCGAAGTGGGAACGTGGAGAATGCCGCAATGCACGGTCCTCGAGCACAAATTGTGTTAACACCTGAAATCCTTCAAGAATTATCAAACTTGAAGGGACAACAGGGTGCTATCCAAAATCCAAGAAACAGAAGATTTCAAGAAAATTTTGATGAATTTGACGAAGAAGGAGAAATTAATCAAATCGATCCACCATATGGGAACCAAAGACAGAATCATTGGAATGACCGACAATATGGAGAGCCAAATTACAAAATGAAGATTGATTTACCAGTTTTTGATGGGAAATTAAATGCTCGTAACAATTTAGTAGAAAGCAATCAACAACAAGTTGCAAGATATATTTCAGGCCCAAAGAAACAAATAAAAGATCAACTAAATTTACAAAACCCAAATGTCCTAGCTGAAGCAGTTTCATTGGCTGAAACATTGGAAGAACAATTAGATACAACTCCCCCAAAACAACAATTTCTAAAAAATAGAATTGAGAAACAATCTCATAATTGGAACAAAAAGGACAGTGCTTACCATGAGTTTGAACAAGGCTCCACTTCTAATGTTAATAAAGGAAAAAATCCAGTAGCTTATAAACCCATAGGTGACGATAGACTAACTGAAAATCAACCAAACAATCAAGATCTTAGAAAGTCAGTCAATCCATATGCTAAACCAACACCAAATAAATATTATAGATGTGGAAAACAAGGACATATTTCTAATCAGTGCCCAGCAAGAAAACAAATTGCAATAATGGAAGAATGTGTGAATGAAGATGATGATATTAATGATGATAATGAAGGAGAGGAAGAAATTGAATATGCTAAGGGTGATGAAGGAGAACAATTAAATTGTGTTGTTCAACGAATTTTACTAACACCAAAAATAGAAACTCATCCTCAACGACATTCCTTGTTTAGAACTAAGTGTACTATCATGGGAAAAATCAATCTCTCTCTAATGCTGAAGAATGAGTTGTTGTTGCCTTTGAATCTTATCAATGCTTTGCATGGAAGTACAGAGGGGAAGTACAGAGGGGAAAAGTCTCTGTTGAATTAA ATGACTGGTCAAAGAGATAATCTCAATCCAGACACAGTTCGAAGTGGGAACGTGGAGAATGCCGCAATGCACGGTCCTCGAGCACAAATTGTGTTAACACCTGAAATCCTTCAAGAATTATCAAACTTGAAGGGACAACAGGGTGCTATCCAAAATCCAAGAAACAGAAGATTTCAAGAAAATTTTGATGAATTTGACGAAGAAGGAGAAATTAATCAAATCGATCCACCATATGGGAACCAAAGACAGAATCATTGGAATGACCGACAATATGGAGAGCCAAATTACAAAATGAAGATTGATTTACCAGTTTTTGATGGGAAATTAAATGCTCGTAACAATTTAGTAGAAAGCAATCAACAACAAGTTGCAAGATATATTTCAGGCCCAAAGAAACAAATAAAAGATCAACTAAATTTACAAAACCCAAATGTCCTAGCTGAAGCAGTTTCATTGGCTGAAACATTGGAAGAACAATTAGATACAACTCCCCCAAAACAACAATTTCTAAAAAATAGAATTGAGAAACAATCTCATAATTGGAACAAAAAGGACAGTGCTTACCATGAGTTTGAACAAGGCTCCACTTCTAATGTTAATAAAGGAAAAAATCCAGTAGCTTATAAACCCATAGGTGACGATAGACTAACTGAAAATCAACCAAACAATCAAGATCTTAGAAAGTCAGTCAATCCATATGCTAAACCAACACCAAATAAATATTATAGATGTGGAAAACAAGGACATATTTCTAATCAGTGCCCAGCAAGAAAACAAATTGCAATAATGGAAGAATGTGTGAATGAAGATGATGATATTAATGATGATAATGAAGGAGAGGAAGAAATTGAATATGCTAAGGGTGATGAAGGAGAACAATTAAATTGTGTTGTTCAACGAATTTTACTAACACCAAAAATAGAAACTCATCCTCAACGACATTCCTTGTTTAGAACTAAGTGTACTATCATGGGAAAAATCAATCTCTCTCTAATGCTGAAGAATGAGTTGTTGTTGCCTTTGAATCTTATCAATGCTTTGCATGGAAGTACAGAGGGGAAGTACAGAGGGGAAAAGTCTCTGTTGAATTAA MTGQRDNLNPDTVRSGNVENAAMHGPRAQIVLTPEILQELSNLKGQQGAIQNPRNRRFQENFDEFDEEGEINQIDPPYGNQRQNHWNDRQYGEPNYKMKIDLPVFDGKLNARNNLVESNQQQVARYISGPKKQIKDQLNLQNPNVLAEAVSLAETLEEQLDTTPPKQQFLKNRIEKQSHNWNKKDSAYHEFEQGSTSNVNKGKNPVAYKPIGDDRLTENQPNNQDLRKSVNPYAKPTPNKYYRCGKQGHISNQCPARKQIAIMEECVNEDDDINDDNEGEEEIEYAKGDEGEQLNCVVQRILLTPKIETHPQRHSLFRTKCTIMGKINLSLMLKNELLLPLNLINALHGSTEGKYRGEKSLLN Homology
BLAST of Lag0028518 vs. NCBI nr
Match: TYK30863.1 (transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 141.4 bits (355), Expect = 1.6e-29 Identity = 94/225 (41.78%), Postives = 139/225 (61.78%), Query Frame = 0
BLAST of Lag0028518 vs. NCBI nr
Match: KAA0035681.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 141.0 bits (354), Expect = 2.1e-29 Identity = 94/226 (41.59%), Postives = 140/226 (61.95%), Query Frame = 0
BLAST of Lag0028518 vs. NCBI nr
Match: XP_031743026.1 (uncharacterized protein LOC116404533 [Cucumis sativus]) HSP 1 Score: 135.6 bits (340), Expect = 8.7e-28 Identity = 84/221 (38.01%), Postives = 128/221 (57.92%), Query Frame = 0
BLAST of Lag0028518 vs. NCBI nr
Match: XP_020259159.1 (uncharacterized protein LOC109835598 [Asparagus officinalis]) HSP 1 Score: 134.8 bits (338), Expect = 1.5e-27 Identity = 87/223 (39.01%), Postives = 123/223 (55.16%), Query Frame = 0
BLAST of Lag0028518 vs. NCBI nr
Match: XP_031745468.1 (uncharacterized protein LOC116405837 [Cucumis sativus] >XP_031745508.1 uncharacterized protein LOC116405854 [Cucumis sativus]) HSP 1 Score: 134.4 bits (337), Expect = 1.9e-27 Identity = 83/221 (37.56%), Postives = 128/221 (57.92%), Query Frame = 0
BLAST of Lag0028518 vs. ExPASy TrEMBL
Match: A0A5D3E417 (Transposon Ty3-I Gag-Pol polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00630 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 7.7e-30 Identity = 94/225 (41.78%), Postives = 139/225 (61.78%), Query Frame = 0
BLAST of Lag0028518 vs. ExPASy TrEMBL
Match: A0A5A7T256 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G003810 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.0e-29 Identity = 94/226 (41.59%), Postives = 140/226 (61.95%), Query Frame = 0
BLAST of Lag0028518 vs. ExPASy TrEMBL
Match: A0A5B7BER3 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_036800 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.0e-29 Identity = 87/227 (38.33%), Postives = 124/227 (54.63%), Query Frame = 0
BLAST of Lag0028518 vs. ExPASy TrEMBL
Match: A0A5D3DGR0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00870 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.1e-25 Identity = 76/221 (34.39%), Postives = 125/221 (56.56%), Query Frame = 0
BLAST of Lag0028518 vs. ExPASy TrEMBL
Match: A0A5D3C3X9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00540 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.3e-25 Identity = 102/318 (32.08%), Postives = 148/318 (46.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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