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Lag0028511 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACTCGCCGATTCCAGCGACGAACACCCACAACTCCTCAACGACCTTCCCAACCCCACTGACTCCACCACCACCTGCTCCGGCATCGGCATCGATCTCAACGAGATCCCTTCCCCTTCCTCCTTCTCTGAAACCCTATCCGATACATTCGACGTCGTCCGCTCCTTCCACGACAACCCTCCGTCGCCCGATGGCGACCCCACCGATGTCCCGCGCGGCCTACGTGGCTCGCTCTGTGCCTTGTGCGGCCAGCCGGAGGTGCACGGCCACGTCGTCGTCTGCGATGGATGCGAGCGGGGCTTTCATTTGGCTTGCACCGGAATGCGGGGGGTTCAGGCGTTGAATTCCGACGATTGGGTCTGTAGGGACTGTTTCGGCAGCGGGGTCAAGAGTAAGCGCTGGCCGCTTGGGGTTAAGTCGAAGCAGCTCCTCGATATCAACGCTTCTCCGCCGAGTGATGGTGATGCGTATGCCGAGGATGTGGAGGAATTGTCGGGTTTCAGGTATGGGGGTTTCTGCCTGAAATGGGGAAGAGAAGACGTGGTTACTTTTCGTTCTCTTCTAGCTGGCTGCTTTCTATTTTTTTAGCACATTTTTTGAGTTTCCGGCCGGAAACAGAGGAGGAGGGAGGTCCCTCCTCCCTCCCTTTTCTATTTTTTTTTTTAAAAAAACATTGAAGAAAAGAAGAGAAGAAGAAAGAAGAAAAAATAAAAAATAAAAATTCAGTCGCTGGCGGCGGCGTGTGGTGGCCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGAAGGAGGAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAAGAGAGAAAGAAAAAAAAATAAATATTAATTTTTTAATTTTTTAATATTTTTTATTTAAAAAATAAAACAAAAATAATTTTTTATATTAAAATAATAGTGCCACGTCAGCAACCGTTAAAAGTTAACAGAAAATTTGACGGCAGGGACCAAAGTGCTCCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCCAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTTGATTGTTTATTAAAATGAGTTGGTCCTCTAAAACTTTTCCGCTGCGTAGGGCTTTTATCCCTTCACATCAGGAGTCAAGAGAAAACCTTCTCCCTCATCCTAAAGTTAAGTTTACAAAGCTCCTCTTCAGGAACCATTGGAGAAAATTCCTCGACTTCCAATTTGTGGCTCTTGTAGCAAGCGGCACGTCGGGCAATGTTGGTCAAGGAAAAAGGTTTGCTTCAAGTGTGGCAATGAGGGCCACTTTGCAAGGGTGTGCACTCAGGAAGAACCAATCACCGAAAGGCCTTGCCAACACCAGCACAAGGAGGTAAGCAAAGAGCTTGAGTGTTTGTTATGGCAAAGGAAGAAGTGGATGATGCTGATGCTATTGCTCCAGGTACTATGTGCTAGTCTTCGAACTTTTGCACGCTTATCTCTTGCTCATTTTATGCTCAGTAAATTCTTGCATAATTTTTTTATCTTGGCTTAGTATTCTTGCTTTTGTATCATTTTGTTTCGGATAAAGTCATTCCTTTGTTTCCTTGTCATTTGTTCGTCAAGAACGCATTGAGCTAGAGACATGCATTATCTGTTTCTCATATCCTCATCGTTGCACCAAAGTTCCAGATCCAAGTGAGACCAAGATCTTGAGAGTCAAGAACTCTCTTTAGCAAAAGAGCTTAGAGCATAAACCCCTAGAGAAGAGTAGCTTGGAAAAAAGAAATCAAATTCATGGCCAAATATCCTAAGTGGTTAGGCTAGCAACTTTCGAGGACGAAAGTTTTTAAGGTGGGGAGTTTGTAACGCCCTGCGTTATAAAATTGGGCTAATTCTAGATCATTCGGGTCTATTCCCTAAAGTTTGTATCTGGAAAATTAAGCCTAACTCTTAAGTCAATAATTTCTTTTTCCTTCGAAATTTAAATTTAAAATTTGGCCTAAATCTTTTTAGATATTCTAAGATTTGATTTGGGCTTGAGGGGCCTTAATTGAGTCTTTAAATGTGAGGTTAGGTTAATATTTTTCTCTTACTTTTCTCTTCTCGCCGGCGTAAAGGACCCACGAACGAGTCGTCTCTCTCCATCATCCCTCTTTTGCGTGCCCCGCCAGCCTCCCTGTGGTTTCTCGTTCGCCAACCTCTATCTCGTCATCCTCGCATGTTTTGCCTTCGTCTCCCTCTCATTTTCTTCATCCGTGTGCGCAGCAGGTGTCCGTGGTTGTAGCATGCTTATCATAGATCGCATCATAACAACTCAACATACATCAACATTATTAGGGGCAGATCTACATTGGGGCAAGGGGCACGTGCCGCCATGA ATGGAACTCGCCGATTCCAGCGACGAACACCCACAACTCCTCAACGACCTTCCCAACCCCACTGACTCCACCACCACCTGCTCCGGCATCGGCATCGATCTCAACGAGATCCCTTCCCCTTCCTCCTTCTCTGAAACCCTATCCGATACATTCGACGTCGTCCGCTCCTTCCACGACAACCCTCCGTCGCCCGATGGCGACCCCACCGATGTCCCGCGCGGCCTACGTGGCTCGCTCTGTGCCTTGTGCGGCCAGCCGGAGGTGCACGGCCACGTCGTCGTCTGCGATGGATGCGAGCGGGGCTTTCATTTGGCTTGCACCGGAATGCGGGGGGTTCAGGCGTTGAATTCCGACGATTGGGTCTGTAGGGACTGTTTCGGCAGCGGGGTCAAGAGTAAGCGCTGGCCGCTTGGGGTTAAGTCGAAGCAGCTCCTCGATATCAACGCTTCTCCGCCGAGTGATGGTGATGCGTATGCCGAGGATGTGGAGGAATTGTCGGGTTTCAGGGCTTTTATCCCTTCACATCAGGAGTCAAGAGAAAACCTTCTCCCTCATCCTAAAGTTAAGTTTACAAAGCTCCTCTTCAGGAACCATTGGAGAAAATTCCTCGACTTCCAATTTGTGGCTCTTGTAGCAAGCGGCACGTCGGGCAATGTTGGTCAAGGAAAAAGGTTTGCTTCAAGTGTGGCAATGAGGGCCACTTTGCAAGGGTGTGCACTCAGGAAGAACCAATCACCGAAAGGCCTTGCCAACACCAGCACAAGGAGGTTAATATTTTTCTCTTACTTTTCTCTTCTCGCCGGCGTAAAGGACCCACGAACGAGTCGTCTCTCTCCATCATCCCTCTTTTGCGTGCCCCGCCAGCCTCCCTGTGGTTTCTCGTTCGCCAACCTCTATCTCGTCATCCTCGCATGTTTTGCCTTCGTCTCCCTCTCATTTTCTTCATCCGTGTGCGCAGCAGGTGTCCGTGGTTGTAGCATGCTTATCATAGATCGCATCATAACAACTCAACATACATCAACATTATTAGGGGCAGATCTACATTGGGGCAAGGGGCACGTGCCGCCATGA ATGGAACTCGCCGATTCCAGCGACGAACACCCACAACTCCTCAACGACCTTCCCAACCCCACTGACTCCACCACCACCTGCTCCGGCATCGGCATCGATCTCAACGAGATCCCTTCCCCTTCCTCCTTCTCTGAAACCCTATCCGATACATTCGACGTCGTCCGCTCCTTCCACGACAACCCTCCGTCGCCCGATGGCGACCCCACCGATGTCCCGCGCGGCCTACGTGGCTCGCTCTGTGCCTTGTGCGGCCAGCCGGAGGTGCACGGCCACGTCGTCGTCTGCGATGGATGCGAGCGGGGCTTTCATTTGGCTTGCACCGGAATGCGGGGGGTTCAGGCGTTGAATTCCGACGATTGGGTCTGTAGGGACTGTTTCGGCAGCGGGGTCAAGAGTAAGCGCTGGCCGCTTGGGGTTAAGTCGAAGCAGCTCCTCGATATCAACGCTTCTCCGCCGAGTGATGGTGATGCGTATGCCGAGGATGTGGAGGAATTGTCGGGTTTCAGGGCTTTTATCCCTTCACATCAGGAGTCAAGAGAAAACCTTCTCCCTCATCCTAAAGTTAAGTTTACAAAGCTCCTCTTCAGGAACCATTGGAGAAAATTCCTCGACTTCCAATTTGTGGCTCTTGTAGCAAGCGGCACGTCGGGCAATGTTGGTCAAGGAAAAAGGTTTGCTTCAAGTGTGGCAATGAGGGCCACTTTGCAAGGGTGTGCACTCAGGAAGAACCAATCACCGAAAGGCCTTGCCAACACCAGCACAAGGAGGTTAATATTTTTCTCTTACTTTTCTCTTCTCGCCGGCGTAAAGGACCCACGAACGAGTCGTCTCTCTCCATCATCCCTCTTTTGCGTGCCCCGCCAGCCTCCCTGTGGTTTCTCGTTCGCCAACCTCTATCTCGTCATCCTCGCATGTTTTGCCTTCGTCTCCCTCTCATTTTCTTCATCCGTGTGCGCAGCAGGTGTCCGTGGTTGTAGCATGCTTATCATAGATCGCATCATAACAACTCAACATACATCAACATTATTAGGGGCAGATCTACATTGGGGCAAGGGGCACGTGCCGCCATGA MELADSSDEHPQLLNDLPNPTDSTTTCSGIGIDLNEIPSPSSFSETLSDTFDVVRSFHDNPPSPDGDPTDVPRGLRGSLCALCGQPEVHGHVVVCDGCERGFHLACTGMRGVQALNSDDWVCRDCFGSGVKSKRWPLGVKSKQLLDINASPPSDGDAYAEDVEELSGFRAFIPSHQESRENLLPHPKVKFTKLLFRNHWRKFLDFQFVALVASGTSGNVGQGKRFASSVAMRATLQGCALRKNQSPKGLANTSTRRLIFFSYFSLLAGVKDPRTSRLSPSSLFCVPRQPPCGFSFANLYLVILACFAFVSLSFSSSVCAAGVRGCSMLIIDRIITTQHTSTLLGADLHWGKGHVPP Homology
BLAST of Lag0028511 vs. NCBI nr
Match: XP_022928164.1 (methyl-CpG-binding domain-containing protein 9-like [Cucurbita moschata]) HSP 1 Score: 303.1 bits (775), Expect = 3.1e-78 Identity = 146/169 (86.39%), Postives = 149/169 (88.17%), Query Frame = 0
BLAST of Lag0028511 vs. NCBI nr
Match: KAG6588968.1 (Methyl-CpG-binding domain-containing protein 9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 302.0 bits (772), Expect = 6.9e-78 Identity = 145/169 (85.80%), Postives = 149/169 (88.17%), Query Frame = 0
BLAST of Lag0028511 vs. NCBI nr
Match: KAG7022736.1 (Methyl-CpG-binding domain-containing protein 9 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 301.2 bits (770), Expect = 1.2e-77 Identity = 145/169 (85.80%), Postives = 148/169 (87.57%), Query Frame = 0
BLAST of Lag0028511 vs. NCBI nr
Match: XP_023531672.1 (methyl-CpG-binding domain-containing protein 9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 300.4 bits (768), Expect = 2.0e-77 Identity = 145/169 (85.80%), Postives = 148/169 (87.57%), Query Frame = 0
BLAST of Lag0028511 vs. NCBI nr
Match: XP_038904732.1 (methyl-CpG-binding domain-containing protein 9 isoform X1 [Benincasa hispida]) HSP 1 Score: 300.1 bits (767), Expect = 2.6e-77 Identity = 146/172 (84.88%), Postives = 151/172 (87.79%), Query Frame = 0
BLAST of Lag0028511 vs. ExPASy Swiss-Prot
Match: Q9SGH2 (Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=MBD9 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.6e-32 Identity = 80/178 (44.94%), Postives = 101/178 (56.74%), Query Frame = 0
BLAST of Lag0028511 vs. ExPASy Swiss-Prot
Match: Q63ZP1 (PHD finger protein 10 OS=Xenopus laevis OX=8355 GN=phf10 PE=2 SV=2) HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04 Identity = 19/46 (41.30%), Postives = 26/46 (56.52%), Query Frame = 0
BLAST of Lag0028511 vs. ExPASy Swiss-Prot
Match: Q2T9V9 (PHD finger protein 10 OS=Bos taurus OX=9913 GN=PHF10 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04 Identity = 18/46 (39.13%), Postives = 26/46 (56.52%), Query Frame = 0
BLAST of Lag0028511 vs. ExPASy Swiss-Prot
Match: Q8WUB8 (PHD finger protein 10 OS=Homo sapiens OX=9606 GN=PHF10 PE=1 SV=3) HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04 Identity = 18/46 (39.13%), Postives = 26/46 (56.52%), Query Frame = 0
BLAST of Lag0028511 vs. ExPASy Swiss-Prot
Match: Q9D8M7 (PHD finger protein 10 OS=Mus musculus OX=10090 GN=Phf10 PE=1 SV=4) HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04 Identity = 18/46 (39.13%), Postives = 26/46 (56.52%), Query Frame = 0
BLAST of Lag0028511 vs. ExPASy TrEMBL
Match: A0A6J1EK30 (methyl-CpG-binding domain-containing protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111435067 PE=3 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 1.5e-78 Identity = 146/169 (86.39%), Postives = 149/169 (88.17%), Query Frame = 0
BLAST of Lag0028511 vs. ExPASy TrEMBL
Match: A0A6J1JG50 (methyl-CpG-binding domain-containing protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111486613 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 1.7e-77 Identity = 144/169 (85.21%), Postives = 148/169 (87.57%), Query Frame = 0
BLAST of Lag0028511 vs. ExPASy TrEMBL
Match: A0A0A0LHX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G835880 PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 2.4e-76 Identity = 143/172 (83.14%), Postives = 151/172 (87.79%), Query Frame = 0
BLAST of Lag0028511 vs. ExPASy TrEMBL
Match: A0A5A7UEN4 (Methyl-CpG-binding domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G00570 PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 5.3e-76 Identity = 147/197 (74.62%), Postives = 156/197 (79.19%), Query Frame = 0
BLAST of Lag0028511 vs. ExPASy TrEMBL
Match: A0A1S3B7P9 (methyl-CpG-binding domain-containing protein 9 OS=Cucumis melo OX=3656 GN=LOC103487073 PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 5.3e-76 Identity = 147/197 (74.62%), Postives = 156/197 (79.19%), Query Frame = 0
BLAST of Lag0028511 vs. TAIR 10
Match: AT3G01460.1 (methyl-CPG-binding domain 9 ) HSP 1 Score: 141.7 bits (356), Expect = 1.1e-33 Identity = 80/178 (44.94%), Postives = 101/178 (56.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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