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Lag0028499 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGGAGCAATATCTTTCCCAAGCCGAAAAAGAAGTGCTGCTAAAAGCAGTGGGGCTAGCACTACCAATATACACAATGAGTTGCTTCAAGCTGCCGAAAGAAGTATGCAAGGAAATCAATCAAAACTTGCACGCTACTGGTGGCAAAAGAAGAAGGAAAAGAGAGGCGTTCATTGGGGATCTTGGGAAGAGCTAACAAAGCCGAAGACTACTGGTGGCTTGAATCTAAAGGATATCCATTGTTTTAACCTTGCTCTACTGGCGAAGCAAGGATGGAGGATCCTTAAATACCCTGATAGCCTACTCGCAAGAATATACAAGGCTCAGTATTACAATCACGTTGATTTCCTGAAGGGGACAACCTTAGGAAGAGCATCATGGGGTTGGTGTAGCATCTTAGCAGGGAGAGATGTCCTACGGTAAGGGCTTCGCTGGCAAATAGGAAAAGGGTCAAATTTAAACATCTAGAAGGATCCATGGATCCCGAGACGCTCTACTTTCAAGCCTCTGAGGTGCTTAAGTAATACATGGCAACTGGTCAAAGAACTGTTGGAGGAAAATGGCTTGAGCTGGAGGGAGGATCGACTAAGGACCTGTTTAGCAACTGAGGATGTGGATTTAGTCTTGGCTATTCCTATCAGTAGAAGTGAGGCTAAGGATCGACCTGTTGGGCACTTCACAAACTTTGGTGTTTATACGGTTAGATCCGGGTACCGCACGACGAAGGCTTTGTCTTTCAATGTTGAGTTCAGTGCGAGTGGAGACAGAAATTGCGTGTGGCAGAACATATGGACCATGCCTTGCAACCAAAAAATAAAAAACTTTATATGGCAGGCTTGCAAAAATTTTCTTGCAGTAAACGGAAACCTAGCTAGAAGAGGGATGCAGACTGATGATCACTGCCCAATTTTGCTGGAAGGAAATGGAGATGGTAAATCATGTCCTCCTTGAATGTGATCCGACCCAGGCCTTCTGGTTTGGGTCACCGCTCCAACTGGACACCAGTAGGTACACGGGCTTGCGCTTTGAGCTGAGTTGGGAGAGGATATACAGAAGATTGGATGGGAAAGAAAATATGGAGGAGGCTCTGTGTTTTTTAGGGCATGGCCTATGGAGGGTCTGGAAGGCCAGGAATGCTGCGAAATTTACGAATATTTATCCTGATATTGAGGTTAATATTTTATCCACCAATAGAGAGGTTGGTGAGTTCAGAGATGCTAGGAGTGAGACAGGTGGAGACAAGCGAGGGGGGCATGAAGATGAGCACTGGCAGACAATACCAGCTCTCGATTGGCCCACCTTATGGGTGGATACAGCTTGGAATAAGGAGCATGAACAACATGCATGCAGAAGGGAAAGCCCTACTTCGAAGCTTGGAATGTGCCAGAGAGAGGGGAGCTCGGAATTTGCTAATTAA ATGGGCGGAGCAATATCTTTCCCAAGCCGAAAAAGAAGTGCTGCTAAAAGCAGTGGGGCTAGCACTACCAATATACACAATGAGTTGCTTCAAGCTGCCGAAAGAAGTATGCAAGGAAATCAATCAAAACTTGCACGCTACTGGTGGCAAAAGAAGAAGGAAAAGAGAGGCGTTCATTGGGGATCTTGGGAAGAGCTAACAAAGCCGAAGACTACTGGTGGCTTGAATCTAAAGGATATCCATTGTTTTAACCTTGCTCTACTGGCGAAGCAAGGATGGAGGATCCTTAAATACCCTGATAGCCTACTCGCAAGAATATACAAGGCTCAGTATTACAATCACGTTGATTTCCTGAAGGGGACAACCTTAGGAAGAGCATCATGGGGTTGGTGTAGCATCTTAGCAGGGAGAGATGTCCTACGTAATACATGGCAACTGGTCAAAGAACTGTTGGAGGAAAATGGCTTGAGCTGGAGGGAGGATCGACTAAGGACCTGTTTAGCAACTGAGGATGTGGATTTAGTCTTGGCTATTCCTATCAGTAGAAGTGAGGCTAAGGATCGACCTGTTGGGCACTTCACAAACTTTGGTGTTTATACGGAAATGGAGATGGTAAATCATGTCCTCCTTGAATGTGATCCGACCCAGGCCTTCTGGTTTGGGTCACCGCTCCAACTGGACACCAGTAGGTACACGGGCTTGCGCTTTGAGCTGAGTTGGGAGAGGATATACAGAAGATTGGATGGGAAAGAAAATATGGAGGAGGCTCTGTGTTTTTTAGGGCATGGCCTATGGAGGGTCTGGAAGGCCAGGAATGCTGCGAAATTTACGAATATTTATCCTGATATTGAGGTTAATATTTTATCCACCAATAGAGAGGTTGGTGAGTTCAGAGATGCTAGGAGTGAGACAGGTGGAGACAAGCGAGGGGGGCATGAAGATGAGCACTGGCAGACAATACCAGCTCTCGATTGGCCCACCTTATGGGTGGATACAGCTTGGAATAAGGAGCATGAACAACATGCATGCAGAAGGGAAAGCCCTACTTCGAAGCTTGGAATGTGCCAGAGAGAGGGGAGCTCGGAATTTGCTAATTAA ATGGGCGGAGCAATATCTTTCCCAAGCCGAAAAAGAAGTGCTGCTAAAAGCAGTGGGGCTAGCACTACCAATATACACAATGAGTTGCTTCAAGCTGCCGAAAGAAGTATGCAAGGAAATCAATCAAAACTTGCACGCTACTGGTGGCAAAAGAAGAAGGAAAAGAGAGGCGTTCATTGGGGATCTTGGGAAGAGCTAACAAAGCCGAAGACTACTGGTGGCTTGAATCTAAAGGATATCCATTGTTTTAACCTTGCTCTACTGGCGAAGCAAGGATGGAGGATCCTTAAATACCCTGATAGCCTACTCGCAAGAATATACAAGGCTCAGTATTACAATCACGTTGATTTCCTGAAGGGGACAACCTTAGGAAGAGCATCATGGGGTTGGTGTAGCATCTTAGCAGGGAGAGATGTCCTACGTAATACATGGCAACTGGTCAAAGAACTGTTGGAGGAAAATGGCTTGAGCTGGAGGGAGGATCGACTAAGGACCTGTTTAGCAACTGAGGATGTGGATTTAGTCTTGGCTATTCCTATCAGTAGAAGTGAGGCTAAGGATCGACCTGTTGGGCACTTCACAAACTTTGGTGTTTATACGGAAATGGAGATGGTAAATCATGTCCTCCTTGAATGTGATCCGACCCAGGCCTTCTGGTTTGGGTCACCGCTCCAACTGGACACCAGTAGGTACACGGGCTTGCGCTTTGAGCTGAGTTGGGAGAGGATATACAGAAGATTGGATGGGAAAGAAAATATGGAGGAGGCTCTGTGTTTTTTAGGGCATGGCCTATGGAGGGTCTGGAAGGCCAGGAATGCTGCGAAATTTACGAATATTTATCCTGATATTGAGGTTAATATTTTATCCACCAATAGAGAGGTTGGTGAGTTCAGAGATGCTAGGAGTGAGACAGGTGGAGACAAGCGAGGGGGGCATGAAGATGAGCACTGGCAGACAATACCAGCTCTCGATTGGCCCACCTTATGGGTGGATACAGCTTGGAATAAGGAGCATGAACAACATGCATGCAGAAGGGAAAGCCCTACTTCGAAGCTTGGAATGTGCCAGAGAGAGGGGAGCTCGGAATTTGCTAATTAA MGGAISFPSRKRSAAKSSGASTTNIHNELLQAAERSMQGNQSKLARYWWQKKKEKRGVHWGSWEELTKPKTTGGLNLKDIHCFNLALLAKQGWRILKYPDSLLARIYKAQYYNHVDFLKGTTLGRASWGWCSILAGRDVLRNTWQLVKELLEENGLSWREDRLRTCLATEDVDLVLAIPISRSEAKDRPVGHFTNFGVYTEMEMVNHVLLECDPTQAFWFGSPLQLDTSRYTGLRFELSWERIYRRLDGKENMEEALCFLGHGLWRVWKARNAAKFTNIYPDIEVNILSTNREVGEFRDARSETGGDKRGGHEDEHWQTIPALDWPTLWVDTAWNKEHEQHACRRESPTSKLGMCQREGSSEFAN Homology
BLAST of Lag0028499 vs. NCBI nr
Match: CAB4274760.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 182.6 bits (462), Expect = 6.2e-42 Identity = 108/378 (28.57%), Postives = 159/378 (42.06%), Query Frame = 0
BLAST of Lag0028499 vs. NCBI nr
Match: CAB4303756.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 179.9 bits (455), Expect = 4.0e-41 Identity = 106/378 (28.04%), Postives = 158/378 (41.80%), Query Frame = 0
BLAST of Lag0028499 vs. NCBI nr
Match: CAB4291403.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 179.1 bits (453), Expect = 6.9e-41 Identity = 102/286 (35.66%), Postives = 145/286 (50.70%), Query Frame = 0
BLAST of Lag0028499 vs. NCBI nr
Match: CAB4306970.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 177.9 bits (450), Expect = 1.5e-40 Identity = 93/283 (32.86%), Postives = 146/283 (51.59%), Query Frame = 0
BLAST of Lag0028499 vs. NCBI nr
Match: CAB4269469.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 174.5 bits (441), Expect = 1.7e-39 Identity = 96/334 (28.74%), Postives = 140/334 (41.92%), Query Frame = 0
BLAST of Lag0028499 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 4.0e-15 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of Lag0028499 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 5.7e-06 Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 0
BLAST of Lag0028499 vs. ExPASy TrEMBL
Match: A0A6J5UE59 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23353 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 3.0e-42 Identity = 108/378 (28.57%), Postives = 159/378 (42.06%), Query Frame = 0
BLAST of Lag0028499 vs. ExPASy TrEMBL
Match: A0A6J5WPU6 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20372 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 2.0e-41 Identity = 106/378 (28.04%), Postives = 158/378 (41.80%), Query Frame = 0
BLAST of Lag0028499 vs. ExPASy TrEMBL
Match: A0A6J5VSP2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51717 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 3.3e-41 Identity = 102/286 (35.66%), Postives = 145/286 (50.70%), Query Frame = 0
BLAST of Lag0028499 vs. ExPASy TrEMBL
Match: A0A6J5WZ67 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS25303 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 7.4e-41 Identity = 93/283 (32.86%), Postives = 146/283 (51.59%), Query Frame = 0
BLAST of Lag0028499 vs. ExPASy TrEMBL
Match: A0A6J5U034 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS15037 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 8.2e-40 Identity = 96/334 (28.74%), Postives = 140/334 (41.92%), Query Frame = 0
BLAST of Lag0028499 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 102.4 bits (254), Expect = 7.6e-22 Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 0
BLAST of Lag0028499 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 84.0 bits (206), Expect = 2.8e-16 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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