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Lag0028495 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAACCAAGAAAGTCTCGACCAACGTAGGTGGAGATTCATCGTCGGTTGGAAAAGAGACGGAAACTACCACCGTCCTCTCACCACAAGAATCAACCGTACGCTTGCTGTCGGTTGAACAAGATACAAAAATCTTGAAAGACGACGTGCGTGAGATAAAGAAGATCTTAGAGATGATATGTGAAAAATTGGACTGCGGAATGGATCAACAAGCTTTTGACCCGAAAATGCATACAATTGTGGAAAGGAGACATCAAGATCATCAAAAGGAAGAATTTAGAACAAAACAGTGGTAAGAAAGGCAAGTTATGGAGCAGAAAACAACCAAGAAGCAATTCCAGCACCAAGATTTCATCAAGAACATCACACGGGACTGCAAGAATTCAAACATAACCCCCTATTTAGAAGACAACCCGAATGGAATGGGGATAGCTCAAGTGAAGAAGATACGAAGAAATTCAAAGAGAAGGCCGAAGAAACTATAGGTATCAACATCAACAAGAGAGCGATTTTAAAATGAAATTGACATCCCAACATATAGTGGAAAATGGAGATCAAGGTCTTCTTGGAGTGGATTAGACACGTAGAAAATTTTTTCAATTATATGAATACACCTGAGAACAAGAAGGTAAGATTGGTGGCCCTAAAGTTAAAGAAGGAGCTCAAGTATGGTGGGATCAACTAGAGATCAACCGTCAAAGATATGGGAAACGACCCATCCAAAGTTGGGAACGGATGAAAAGATTGAGGAAAGAAAGATTCTTGCCAATGAATTTTGAACAAATTCTTTATGACCAATATCAAAATTGTCGGCATGGAATAGATCGGTCATGGAGTATACCGTAGAATTCCATCGGCTGGTGCAAGAACAAATCTTGTAGAAAGTCAACAACACTTATAGCAAGATATAAGGGCGGCCTACACTATGATATTAAGGAGCAACTTGCTTTACAACCTCTTGGACATTTGAATGAGCCATATCTGCGGCAACGACATTGAGGAACAAATTGCTAACCATTTCAAAGAACTTATGCTAGAAGAAATGCGGGCGAGCAAGCAGTGACTTCAACAAATCCACAAGTGGGAAAAAACCAATCCACAAACTCAATGGCAACACTTAAAGGCAAACAATAAAGGTACTGTTTCCAAGGAAGCTAAGAATACAGATGGTTCGCCACAAAAGAACATCCAACACATACTCGAGACCAACATTAGGGAAATGTTTACGATGCAATCAACGGGCCACCTATCCAATGAATGTCCACAAAGAAGGACTCTTGCTATTGTCATACAGTGGATTACAAGAAGATGAGGAAGAAGTTGAACCGATAACAATATAAACTTTCTTGAACCTGATGAAGGGAGCCATTCTTTGGTAATTCAACGCCTTCTCCTTGCTCCCAAAACCAATCCTAGTTACCAACGCATGCCTTATTAAAACTAGATGCACAATCAATGGCAAAATATGCAATGTGATCATTGACTGTGGAGTACTGAAAATGTTGTAGCCAGCAAGCTAGTATCTACACTCAATCTTCCTTTACACCCACATCTGACACCTTATAAGGTGAGTTGGATCAAAAAAGGGAGTGAGCTCAAGTGACTCACACAAGCACAATTCCTTTGACCATAGGAGCAAGTTATAAAGATCAAATCATATGTGATGTATTGGACATGGATGCTTGCCATATATTTGGGCAGACCGTGGCAATATGATGTTCAGGCAATACACAAAGGACGGACAATACCTATGAATTCCTATGGATGGGCAAGAAAATTGTCCTTTTACCAATAAATCCGGCAAAGCAAGTGTCTCCGTCGACTAGTTCTTTAAAGAAAGGTCAACTGTTTACCCTGTCTTGGAAAAATTTCTTTCATGAAAAACATTCTCATATTCTAGGTTAGTTGTTAAACATTTCACTAATCATGATTCTACTGTTGCAATTCCTTTGGAGGTACAAAATTGCTCCAAGAATTCAGTAGCATAATGGAAAACCTGAGCAATCTCCCTCCTTTACGCGATATTCAACATTCAATTGACTTCTTGCCTGGCGCCACACTTCCAAACTCCCTCACTACAAGATGAGTTCGACAGAATACAATATTCTCCATGACCAGGTGCAAGACCTACTCGATAAAGGACACATCCAACCAAGCTTAAGTCCTTGTGTGATTCCAGCCCTCTTAACTCCAAAGAAAGATGGGAGTTGGCGTATGTGTGTGGATAGTAGGGCAATCAATAAAATAACAGTGAAGTATCAGTTCGCAATTCCATGGATAAATGACCTTTTGGATCAACTTGGAGGTGCAACAATCTTCTCAAAGACAGATTTAAAGAGTGGTTATCACCAAATCCGAATACGGCTGGGGATGAATGGAAGACAACTTTTAAGACCAATGAAGGCTTTTTGA ATGACAACCAAGAAAGTCTCGACCAACGTAGGTGGAGATTCATCGTCGGTTGGAAAAGAGACGGAAACTACCACCGTCCTCTCACCACAAGAATCAACCGTACGCTTGCTGTCGGTTGAACAAGATACAAAAATCTTGAAAGACGACGTGCGTGAGATAAAGAAGATCTTAGAGATGATATGTGAAAAATTGGACTGCGGAATGGATCAACAAGCTTTTGACCCGAAAATGCATACAATTGTGGAAAGGAGACATCAAGATCATCAAAAGGAAGAATTTAGAACAAAACAGTGGTTAGTTGTTAAACATTTCACTAATCATGATTCTACTGTTGCAATTCCTTTGGAGGTGCAAGACCTACTCGATAAAGGACACATCCAACCAAGCTTAAGTCCTTGTGTGATTCCAGCCCTCTTAACTCCAAAGAAAGATGGGAGTTGGCGTATGTGTGTGGATAGTAGGGCAATCAATAAAATAACAGTGAAGTATCAGTTCGCAATTCCATGGATAAATGACCTTTTGGATCAACTTGGAGGTGCAACAATCTTCTCAAAGACAGATTTAAAGAGTGGTTATCACCAAATCCGAATACGGCTGGGGATGAATGGAAGACAACTTTTAAGACCAATGAAGGCTTTTTGA ATGACAACCAAGAAAGTCTCGACCAACGTAGGTGGAGATTCATCGTCGGTTGGAAAAGAGACGGAAACTACCACCGTCCTCTCACCACAAGAATCAACCGTACGCTTGCTGTCGGTTGAACAAGATACAAAAATCTTGAAAGACGACGTGCGTGAGATAAAGAAGATCTTAGAGATGATATGTGAAAAATTGGACTGCGGAATGGATCAACAAGCTTTTGACCCGAAAATGCATACAATTGTGGAAAGGAGACATCAAGATCATCAAAAGGAAGAATTTAGAACAAAACAGTGGTTAGTTGTTAAACATTTCACTAATCATGATTCTACTGTTGCAATTCCTTTGGAGGTGCAAGACCTACTCGATAAAGGACACATCCAACCAAGCTTAAGTCCTTGTGTGATTCCAGCCCTCTTAACTCCAAAGAAAGATGGGAGTTGGCGTATGTGTGTGGATAGTAGGGCAATCAATAAAATAACAGTGAAGTATCAGTTCGCAATTCCATGGATAAATGACCTTTTGGATCAACTTGGAGGTGCAACAATCTTCTCAAAGACAGATTTAAAGAGTGGTTATCACCAAATCCGAATACGGCTGGGGATGAATGGAAGACAACTTTTAAGACCAATGAAGGCTTTTTGA MTTKKVSTNVGGDSSSVGKETETTTVLSPQESTVRLLSVEQDTKILKDDVREIKKILEMICEKLDCGMDQQAFDPKMHTIVERRHQDHQKEEFRTKQWLVVKHFTNHDSTVAIPLEVQDLLDKGHIQPSLSPCVIPALLTPKKDGSWRMCVDSRAINKITVKYQFAIPWINDLLDQLGGATIFSKTDLKSGYHQIRIRLGMNGRQLLRPMKAF Homology
BLAST of Lag0028495 vs. NCBI nr
Match: KAG5544947.1 (hypothetical protein RHGRI_017420 [Rhododendron griersonianum]) HSP 1 Score: 150.2 bits (378), Expect = 2.0e-32 Identity = 67/101 (66.34%), Postives = 84/101 (83.17%), Query Frame = 0
BLAST of Lag0028495 vs. NCBI nr
Match: KAG5544950.1 (hypothetical protein RHGRI_017420 [Rhododendron griersonianum]) HSP 1 Score: 150.2 bits (378), Expect = 2.0e-32 Identity = 67/101 (66.34%), Postives = 84/101 (83.17%), Query Frame = 0
BLAST of Lag0028495 vs. NCBI nr
Match: GEY07105.1 (hypothetical protein [Tanacetum cinerariifolium]) HSP 1 Score: 149.1 bits (375), Expect = 4.5e-32 Identity = 65/85 (76.47%), Postives = 77/85 (90.59%), Query Frame = 0
BLAST of Lag0028495 vs. NCBI nr
Match: XP_037426242.1 (uncharacterized protein LOC119291565 [Triticum dicoccoides]) HSP 1 Score: 149.1 bits (375), Expect = 4.5e-32 Identity = 66/85 (77.65%), Postives = 76/85 (89.41%), Query Frame = 0
BLAST of Lag0028495 vs. NCBI nr
Match: PWA63920.1 (reverse transcriptase domain-containing protein [Artemisia annua]) HSP 1 Score: 149.1 bits (375), Expect = 4.5e-32 Identity = 67/84 (79.76%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of Lag0028495 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18 Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 0
BLAST of Lag0028495 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18 Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 0
BLAST of Lag0028495 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.2e-13 Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 0
BLAST of Lag0028495 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.3e-12 Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of Lag0028495 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.3e-12 Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of Lag0028495 vs. ExPASy TrEMBL
Match: A0A2U1MRQ8 (Reverse transcriptase OS=Artemisia annua OX=35608 GN=CTI12_AA348940 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 2.2e-32 Identity = 67/84 (79.76%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of Lag0028495 vs. ExPASy TrEMBL
Match: A0A5D3DYI6 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001350 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 2.4e-31 Identity = 66/84 (78.57%), Postives = 74/84 (88.10%), Query Frame = 0
BLAST of Lag0028495 vs. ExPASy TrEMBL
Match: A0A5D3DIC3 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004500 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 2.4e-31 Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of Lag0028495 vs. ExPASy TrEMBL
Match: A0A438GRM7 (Transposon Ty3-G Gag-Pol polyprotein OS=Vitis vinifera OX=29760 GN=TY3B-G_338 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 2.4e-31 Identity = 66/91 (72.53%), Postives = 78/91 (85.71%), Query Frame = 0
BLAST of Lag0028495 vs. ExPASy TrEMBL
Match: A0A6L2JRM1 (Putative nucleotidyltransferase, ribonuclease H OS=Tanacetum cinerariifolium OX=118510 GN=Tci_011185 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 3.1e-31 Identity = 65/84 (77.38%), Postives = 74/84 (88.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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