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Lag0028476 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAGCCTCCTGCTTGAAAAGCAAAGAAAGCTAGTCGTCCTCGTTCGACTCATAATCCAAATGGAGTTCCTATCAAGTATTCTAAATGGTCTTAGAGAGAACTCGAGTTCTTTCGTGAGCTGGGTGTAAAAGACGAATTGATAGAAAATACTTACTTGGCTGCTTTTCTTTCTTGTTGGTTATGTGTATTTGTGTTTCCCAACAAGCAGGTTTCTCTTCGTCCAAAGGTCTTCAATGTTGTAAGCCTTTCTGGCAGAAGGCTATGCTTTTATTTTTCTATCCCAGTTTTGGCTAATATCTACCATGGATTGGGCCAGATTTATAAAACGTCTCCTTCGACAGGACGTTTAGAGGCTTGTTTTCTAGTGCATTATGTTTACGCTTGGCTTGCTTATTATTTTAATACGCATTATGCAGTTTCAGAAAAAGTTAGAGGCCCAATGATGGTTGAGTTTTCAAAGAGGGTGGAGCTAAATACTTTGATAATTTTGAGGCTCGTGTACATATTCATAAAGGTAAATATGTATCGTGGTATGCGAATCTCCTCCCACAATAAAGGCATGGTTCTGACAGATGATGACAAGCTAACATTTTGGCACTTCTCATTCTTTCTAAGTATTGATCATGCTTCTTATCTTCCCGATGTGGGCCTTCGTTGGTCATTGAATCTTACAATCCTTGTCGATTTAGCCAACAATTTGGATTTTACCAAGACATGCCAAACGATCTAA ATGAGAAGCCTCCTGCTTGAAAAGCAAAGAAAGCTAGTCGTCCTCGTTCGACTCATAATCCAAATGGAGTTCCTATCAAGTATTCTAAATGGTCTTAGAGAGAACTCGAGTTCTTTCGTTTCTCTTCGTCCAAAGGTCTTCAATGTTGTAAGCCTTTCTGGCAGAAGGCTATGCTTTTATTTTTCTATCCCAGTTTTGGCTAATATCTACCATGGATTGGGCCAGATTTATAAAACGTCTCCTTCGACAGGACGTTTAGAGGCTTGTTTTCTAGTGCATTATGTTTACGCTTGGCTTGCTTATTATTTTAATACGCATTATGCAGTTTCAGAAAAAGTTAGAGGCCCAATGATGGTTGAGTTTTCAAAGAGGGTGGAGCTAAATACTTTGATAATTTTGAGGCTCGTGTACATATTCATAAAGGTAAATATGTATCGTGGTATGCGAATCTCCTCCCACAATAAAGGCATGGTTCTGACAGATGATGACAAGCTAACATTTTGGCACTTCTCATTCTTTCTAAGTATTGATCATGCTTCTTATCTTCCCGATGTGGGCCTTCGTTGGTCATTGAATCTTACAATCCTTGTCGATTTAGCCAACAATTTGGATTTTACCAAGACATGCCAAACGATCTAA ATGAGAAGCCTCCTGCTTGAAAAGCAAAGAAAGCTAGTCGTCCTCGTTCGACTCATAATCCAAATGGAGTTCCTATCAAGTATTCTAAATGGTCTTAGAGAGAACTCGAGTTCTTTCGTTTCTCTTCGTCCAAAGGTCTTCAATGTTGTAAGCCTTTCTGGCAGAAGGCTATGCTTTTATTTTTCTATCCCAGTTTTGGCTAATATCTACCATGGATTGGGCCAGATTTATAAAACGTCTCCTTCGACAGGACGTTTAGAGGCTTGTTTTCTAGTGCATTATGTTTACGCTTGGCTTGCTTATTATTTTAATACGCATTATGCAGTTTCAGAAAAAGTTAGAGGCCCAATGATGGTTGAGTTTTCAAAGAGGGTGGAGCTAAATACTTTGATAATTTTGAGGCTCGTGTACATATTCATAAAGGTAAATATGTATCGTGGTATGCGAATCTCCTCCCACAATAAAGGCATGGTTCTGACAGATGATGACAAGCTAACATTTTGGCACTTCTCATTCTTTCTAAGTATTGATCATGCTTCTTATCTTCCCGATGTGGGCCTTCGTTGGTCATTGAATCTTACAATCCTTGTCGATTTAGCCAACAATTTGGATTTTACCAAGACATGCCAAACGATCTAA MRSLLLEKQRKLVVLVRLIIQMEFLSSILNGLRENSSSFVSLRPKVFNVVSLSGRRLCFYFSIPVLANIYHGLGQIYKTSPSTGRLEACFLVHYVYAWLAYYFNTHYAVSEKVRGPMMVEFSKRVELNTLIILRLVYIFIKVNMYRGMRISSHNKGMVLTDDDKLTFWHFSFFLSIDHASYLPDVGLRWSLNLTILVDLANNLDFTKTCQTI Homology
BLAST of Lag0028476 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus]) HSP 1 Score: 113.2 bits (282), Expect = 2.7e-21 Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = 0
BLAST of Lag0028476 vs. NCBI nr
Match: KAA0060136.1 (uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]) HSP 1 Score: 102.8 bits (255), Expect = 3.6e-18 Identity = 60/141 (42.55%), Postives = 81/141 (57.45%), Query Frame = 0
BLAST of Lag0028476 vs. NCBI nr
Match: KAA0042086.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 101.7 bits (252), Expect = 8.1e-18 Identity = 66/175 (37.71%), Postives = 91/175 (52.00%), Query Frame = 0
BLAST of Lag0028476 vs. NCBI nr
Match: TYK18029.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 101.7 bits (252), Expect = 8.1e-18 Identity = 66/175 (37.71%), Postives = 91/175 (52.00%), Query Frame = 0
BLAST of Lag0028476 vs. NCBI nr
Match: KAA0050733.1 (uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa] >TYJ95697.1 uncharacterized protein E5676_scaffold726G00240 [Cucumis melo var. makuwa]) HSP 1 Score: 98.6 bits (244), Expect = 6.9e-17 Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Lag0028476 vs. ExPASy TrEMBL
Match: A0A5A7V0Y4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00570 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18 Identity = 60/141 (42.55%), Postives = 81/141 (57.45%), Query Frame = 0
BLAST of Lag0028476 vs. ExPASy TrEMBL
Match: A0A5D3D3U4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003480 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 3.9e-18 Identity = 66/175 (37.71%), Postives = 91/175 (52.00%), Query Frame = 0
BLAST of Lag0028476 vs. ExPASy TrEMBL
Match: A0A5A7TJC9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005550 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 3.9e-18 Identity = 66/175 (37.71%), Postives = 91/175 (52.00%), Query Frame = 0
BLAST of Lag0028476 vs. ExPASy TrEMBL
Match: A0A5A7U4C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00240 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.3e-17 Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Lag0028476 vs. ExPASy TrEMBL
Match: A0A5A7SRI5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1735G00180 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 5.7e-17 Identity = 57/145 (39.31%), Postives = 78/145 (53.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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