Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCGATTAAGAAGGGATAATGAAGTCTCCCAAGCAGCTCTCAAGTCAAGGAATGACCAAGTTTCGAAGCAACAATATGAGATTGCTTCACTTCATGAGTTGATGAAAGAGCTCAAAGATTGTATTAGTTTGAGGAACCAAACGATTACTGAGGTAGAAGAAAAAAATGGAACGCTATGTCGAACAGTTGACGACTTGCAGTTAACACTCGGGATTAGAGAGGATCAACTAGGGGAACTCATCAACGACAACAAGAGTCTGAGAGATTCTGTTCAGTCACTCAATGTTCGCCTCGGTAAGTATTAGGATACCACTGACAGATTAATAAAAGACTATACCTATCTAATAGAGCAGTACGACAGATTGAGAGATGATTTTGGGTTTGTGAGAAAGAACCACACGACACTACAAAGTAAAGCGGAACATATGCTCACTCAGGTTAGGAAAGTCACTCGAAAGGCAGATGAACTAGCAGAAGATGCACATACTCTCTCTAAAGTCATGGCACCTACACAGCCTAATAGCAAGAATGTGCTCAAGTTTCTCGGAAAGCTTCGTATAAGTTTAGAGTATTGGGGGCAATTTTATTAAATTCTTACTTTAGTTTATCCTTTTTTAGATAGTCGAAATATCTTGTAATTCAATTTTGCACAAATTTTGCTACTACATTGTTTTACCATTTCCCAATTTAATATCAAGGTCATTTTTATTTTCATTTTTCTTTTCCTCTTCAATTGTTTAAATGTTTTGTTTTGTCTTTCTCTTTTCTCACACTAAAATCTCTTTTAATTAAAAATATAAGCAGAGTCATAAGATAGCTTGGTCACCTCGAATCCACCACACCTACGTCACAAGATACAGGACAAGGATCATGGAGAGCAAAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGTCATTCTTGTCGCCTTGGAGAAAGGCAAAATAATAGCTGATATTTCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAACAGAGAGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGGAACACCCATATCCATTTTTCAAGAATGAGCAAGTGTCTATGCACCATCAACCTGGATTTTCACTGCCTAAGGAGGCACCTCCCAAGGTGACCATTACGGTTCCCAATTTAGATGATCTTGAAATCAGGAAAGAGCTAACGGGAGGTGAGAAATCCTCTTCTAGTGAAAAGCTCGAAGTCATGGAGGAGAGATTAAGGGCAGTAGAAGGAACAGACGTCTTTGGAAATATAGACGCGGCCAAGCTATGTTTGGTACCAGATGTAATCCTCCCTCCAAAATTCAAGGTGGCCGAGTTTGAAAAGTATGATGGAGCATCCTGTCCTAAAAACCATCTCATCATGTATTGCAGGAAGATGGCAGCATACGTCTAA
mRNA sequence
ATGCATCGATTAAGAAGGGATAATGAAGTCTCCCAAGCAGCTCTCAAGTCAAGGAATGACCAAGTTTCGAAGCAACAATATGAGATTGCTTCACTTCATGAGTTGATGAAAGAGCTCAAAGATTGTATTAGTTTGAGGAACCAAACGATTACTGAGGTAGAAGAAAAAAATGGAACGCTATGTCGAACAGTTGACGACTTGCAGTTAACACTCGGGATTAGAGAGGATCAACTAGGGGAACTCATCAACGACAACAAGAGTCTGAGAGATTCTGTTCAGTCACTCAATGTTCGCCTCGAGCAGTACGACAGATTGAGAGATGATTTTGGGTTTGTGAGAAAGAACCACACGACACTACAAAGTAAAGCGGAACATATGCTCACTCAGGTTAGGAAAGTCACTCGAAAGGCAGATGAACTAGCAGAAGATGCACATACTCTCTCTAAAGTCATGGCACCTACACAGCCTAATAGCAAGAATGTGCTCAAGTTTCTCGGAAAGCTTCGTATAAGTTTAGACTTGGTCACCTCGAATCCACCACACCTACGTCACAAGATACAGGACAAGGATCATGGAGAGCAAAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGTCATTCTTGTCGCCTTGGAGAAAGGCAAAATAATAGCTGATATTTCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAACAGAGAGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGGAACACCCATATCCATTTTTCAAGAATGAGCAAGTGTCTATGCACCATCAACCTGGATTTTCACTGCCTAAGGAGGCACCTCCCAAGGTGACCATTACGGTTCCCAATTTAGATGATCTTGAAATCAGGAAAGAGCTAACGGGAGGTGAGAAATCCTCTTCTAGTGAAAAGCTCGAAGTCATGGAGGAGAGATTAAGGGCAGTAGAAGGAACAGACGTCTTTGGAAATATAGACGCGGCCAAGCTATGTTTGGTACCAGATGTAATCCTCCCTCCAAAATTCAAGGTGGCCGAGTTTGAAAAGTATGATGGAGCATCCTGTCCTAAAAACCATCTCATCATGTATTGCAGGAAGATGGCAGCATACGTCTAA
Coding sequence (CDS)
ATGCATCGATTAAGAAGGGATAATGAAGTCTCCCAAGCAGCTCTCAAGTCAAGGAATGACCAAGTTTCGAAGCAACAATATGAGATTGCTTCACTTCATGAGTTGATGAAAGAGCTCAAAGATTGTATTAGTTTGAGGAACCAAACGATTACTGAGGTAGAAGAAAAAAATGGAACGCTATGTCGAACAGTTGACGACTTGCAGTTAACACTCGGGATTAGAGAGGATCAACTAGGGGAACTCATCAACGACAACAAGAGTCTGAGAGATTCTGTTCAGTCACTCAATGTTCGCCTCGAGCAGTACGACAGATTGAGAGATGATTTTGGGTTTGTGAGAAAGAACCACACGACACTACAAAGTAAAGCGGAACATATGCTCACTCAGGTTAGGAAAGTCACTCGAAAGGCAGATGAACTAGCAGAAGATGCACATACTCTCTCTAAAGTCATGGCACCTACACAGCCTAATAGCAAGAATGTGCTCAAGTTTCTCGGAAAGCTTCGTATAAGTTTAGACTTGGTCACCTCGAATCCACCACACCTACGTCACAAGATACAGGACAAGGATCATGGAGAGCAAAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGTCATTCTTGTCGCCTTGGAGAAAGGCAAAATAATAGCTGATATTTCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAACAGAGAGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGGAACACCCATATCCATTTTTCAAGAATGAGCAAGTGTCTATGCACCATCAACCTGGATTTTCACTGCCTAAGGAGGCACCTCCCAAGGTGACCATTACGGTTCCCAATTTAGATGATCTTGAAATCAGGAAAGAGCTAACGGGAGGTGAGAAATCCTCTTCTAGTGAAAAGCTCGAAGTCATGGAGGAGAGATTAAGGGCAGTAGAAGGAACAGACGTCTTTGGAAATATAGACGCGGCCAAGCTATGTTTGGTACCAGATGTAATCCTCCCTCCAAAATTCAAGGTGGCCGAGTTTGAAAAGTATGATGGAGCATCCTGTCCTAAAAACCATCTCATCATGTATTGCAGGAAGATGGCAGCATACGTCTAA
Protein sequence
MHRLRRDNEVSQAALKSRNDQVSKQQYEIASLHELMKELKDCISLRNQTITEVEEKNGTLCRTVDDLQLTLGIREDQLGELINDNKSLRDSVQSLNVRLEQYDRLRDDFGFVRKNHTTLQSKAEHMLTQVRKVTRKADELAEDAHTLSKVMAPTQPNSKNVLKFLGKLRISLDLVTSNPPHLRHKIQDKDHGEQSTEMEKTRKDIEELREKMDVILVALEKGKIIADISQSSNTMNDPPIRQSTESTTPKYHPLYNIPVEEHPYPFFKNEQVSMHHQPGFSLPKEAPPKVTITVPNLDDLEIRKELTGGEKSSSSEKLEVMEERLRAVEGTDVFGNIDAAKLCLVPDVILPPKFKVAEFEKYDGASCPKNHLIMYCRKMAAYV
Homology
BLAST of Lag0028468 vs. NCBI nr
Match:
XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])
HSP 1 Score: 181.0 bits (458), Expect = 1.9e-41
Identity = 105/208 (50.48%), Postives = 137/208 (65.87%), Query Frame = 0
Query: 193 EQSTEMEKTRKDIEELREKMDVILVALEKGKIIADISQSSNTMND------------PPI 252
+Q E EKTRKDIEELREK+D I + LEKGK AD + SSN +++ PP+
Sbjct: 3 DQKAEQEKTRKDIEELREKLDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGPPL 62
Query: 253 RQSTESTTPK---YHPLYNIPVEEHPYPFFKNEQVSMHHQPGFSLPKE--APPKVTITVP 312
R E P+ Y+PLY++P+ ++P+ F K Q + F P++ +PP TV
Sbjct: 63 RPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQ-QIPTNIIFREPEQMMSPP----TVX 122
Query: 313 NLDDLEIRKELTGGEKSSSSEKLEVMEERLRAVEGTDVFGNIDAAKLCLVPDVILPPKFK 372
NL + + + + S EK EV+EERLRA+EGTDVFGNIDA++LCLV +++PPKFK
Sbjct: 123 NLGGXPAKTDPV-XQNAXSXEKXEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFK 182
Query: 373 VAEFEKYDGASCPKNHLIMYCRKMAAYV 384
V EFEKYDG+SCPKNHLIMYCRKM AYV
Sbjct: 183 VPEFEKYDGSSCPKNHLIMYCRKMXAYV 204
BLAST of Lag0028468 vs. NCBI nr
Match:
XP_022149382.1 (uncharacterized protein LOC111017812 [Momordica charantia])
HSP 1 Score: 177.2 bits (448), Expect = 2.7e-40
Identity = 105/206 (50.97%), Postives = 136/206 (66.02%), Query Frame = 0
Query: 193 EQSTEMEKTRKDIEELREKMDVILVALEKGKIIADISQSSNTMN------------DPPI 252
+Q E EK RKDIEELREK+DVIL+ALEKGK +AD + SSN ++ DPP+
Sbjct: 3 DQKAEQEKIRKDIEELREKLDVILLALEKGKTVADPTTSSNPVHDQQEIPPYPLGYDPPL 62
Query: 253 RQSTE---STTPKYHPLYNIPVEEHPYPFFKNEQVSMHHQPGFSLPKEAPPKVTITVPNL 312
R E Y+PLY+I V ++P PF K Q + F P++ P T+ NL
Sbjct: 63 RLVAEGFMQQNTTYNPLYDILVGQYPPPFVKGTQ-QIPTNIIFREPEQMMPPPTVL--NL 122
Query: 313 DDLEIRKELTGGEKSSSSEKLEVMEERLRAVEGTDVFGNIDAAKLCLVPDVILPPKFKVA 372
L ++ + G+ + S+EK EV+EERL AVEGTDVFGNIDA++LCL+ +++ KFKV
Sbjct: 123 GGLLVKTDPV-GQSTPSNEKFEVLEERLIAVEGTDVFGNIDASQLCLISGLVILLKFKVP 182
Query: 373 EFEKYDGASCPKNHLIMYCRKMAAYV 384
EFEKYDG+SCPKNHLIMYC+ MAAYV
Sbjct: 183 EFEKYDGSSCPKNHLIMYCKNMAAYV 204
BLAST of Lag0028468 vs. NCBI nr
Match:
XP_022155098.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia])
HSP 1 Score: 175.3 bits (443), Expect = 1.0e-39
Identity = 106/217 (48.85%), Postives = 137/217 (63.13%), Query Frame = 0
Query: 193 EQSTEMEKTRKDIEELREKMDVILVALEKGKIIADISQSSNTMNDPPIRQSTESTTPK-- 252
++ +E EKTRKDIEELREK+D IL+ALEKGK IA ++SN +++PP Q P
Sbjct: 4 DRKSEQEKTRKDIEELREKLDAILLALEKGKTIA---ETSNPIHEPPTPQFPPGFEPSFR 63
Query: 253 -------------------YHPLYNIPVEEHPYPFFKNEQVSMHHQPG---FSLPKE--A 312
Y+PLY+IP + P P + P F P++ A
Sbjct: 64 PAGPSFRPMTEGFMSQYTTYNPLYDIPAGQFPPPLVRGPP----QAPAGIIFQEPEQVIA 123
Query: 313 PPKVTITVPNLDDLEIRKELTGGEKSSSSEKLEVMEERLRAVEGTDVFGNIDAAKLCLVP 372
PP TV NL + K+ +++ SSEKLEV+EERLRAVEGTDVFGNIDA++LCL
Sbjct: 124 PP----TVLNLGGPQANKD-PERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLXS 183
Query: 373 DVILPPKFKVAEFEKYDGASCPKNHLIMYCRKMAAYV 384
+++PPKFK+ EFEKY+G+SCPKNHLIMYCRKMAAY+
Sbjct: 184 GLVIPPKFKIPEFEKYBGSSCPKNHLIMYCRKMAAYI 208
BLAST of Lag0028468 vs. NCBI nr
Match:
EOX99415.1 (Uncharacterized protein TCM_008095 [Theobroma cacao])
HSP 1 Score: 149.8 bits (377), Expect = 4.7e-32
Identity = 130/441 (29.48%), Postives = 213/441 (48.30%), Query Frame = 0
Query: 9 EVSQAALKSRNDQVS-KQQYEIASLHELMKELKDCISLRNQTITEVEEK----NGTLCRT 68
E A KS + S KQ+YE L + +++K +S + + + ++E K N T
Sbjct: 439 ESELARKKSEAENASWKQRYE--DLQKECEKMKREVSEQRKKVQKMEGKYESLNDKFSAT 498
Query: 69 VDDLQLTLGIREDQLGELINDNKSLR-------DSVQSLNVRLE-----------QYDRL 128
+LQ + +RE+Q EL N LR +S+Q L E +Y+RL
Sbjct: 499 TSELQREIQVRENQGNELQTHNDGLRRQVRFQQESIQLLRQEYEELERVMTTYQQEYERL 558
Query: 129 RDDFGFV-------RKNHTTLQSKAEHMLTQVRKVTRKADELAEDAHTLSKVMAPTQPNS 188
+ + R+ +T ++ ++++ Q+R+V KA +A L + P
Sbjct: 559 KQQSTRIQEWGESYRQAYTEKYNQMDYLVWQMREVAYKARSMAWKTDILRSQIFPVGKQE 618
Query: 189 KNVLKFLGKLRI----------SLDLVTSNPP----------HLRHKIQDKDHGEQSTEM 248
+ ++K+L + I ++ + PP R +I +++ E+ M
Sbjct: 619 QQLIKYLDEHIIIHTCINHHFMAISSKIARPPKPSDERVHNTRQRARIMEQEQRERMDRM 678
Query: 249 EKTRKDIEELREKMDVILVALEKGK-IIADISQSSNTMNDPPIRQS-TESTTPKYHPLYN 308
E+ ++++ E KM ++++L KGK I + +QS N PP + S + P Y P +
Sbjct: 679 ERAQEEMREQLAKMMELMMSLSKGKRAIEEPAQSEN----PPAQDSGNQREDPPYPPGFT 738
Query: 309 IPVEE-----HPY---PFFKNEQVSMHHQP---GFSLPKEAPPKVTITVPNLDDLEIRKE 368
P + HP P + N + HQP F P +I +P+LDD + +++
Sbjct: 739 PPHAQTSQRVHPQVIPPVYYNAPPPLGHQPIHGQFGPYSGINPAESINIPDLDDPKEQEK 798
Query: 369 LTG-----GEKSSSSEKLEVMEERLRAVEGTDVFGNIDAAKLCLVPDVILPPKFKVAEFE 382
L G+ +K +++EERLRA+EG D FG +DA +LCLVPDV++P KFKV +FE
Sbjct: 799 LRNDSSQTGKNEKDQKKYDLLEERLRAIEGVDRFGTMDATELCLVPDVLIPAKFKVPKFE 858
BLAST of Lag0028468 vs. NCBI nr
Match:
EOX94372.1 (Uncharacterized protein TCM_003960 [Theobroma cacao])
HSP 1 Score: 148.3 bits (373), Expect = 1.4e-31
Identity = 120/419 (28.64%), Postives = 203/419 (48.45%), Query Frame = 0
Query: 9 EVSQAALKSRNDQVS-KQQYEIASLHELMKELKDCISLRNQTITEVEEK----NGTLCRT 68
E A KS + S KQ+YE L + +++K +S + + + ++E K N T
Sbjct: 439 ESELARKKSEAENASWKQRYE--DLQKECEKMKREVSQQRKKVQKMEGKYESLNDKFSAT 498
Query: 69 VDDLQLTLGIREDQLGELINDNKSLRDSV----QSLNVRLEQYDRL-------RDDFGFV 128
+LQ + ++E++ EL N LR V +S+ + ++Y+ L + ++ +
Sbjct: 499 TSELQREIQVKENRGNELQTHNDGLRRQVRFQQESIQILRQEYEELEGVMTTYQQEYESL 558
Query: 129 RKNHTTLQ--------------SKAEHMLTQVRKVTRKADELAEDAHTLSKVMAPTQPNS 188
++ T +Q + ++++ Q+R+V KA +A + L + P
Sbjct: 559 KQQSTRIQKWGESYRQAYTEKYDQMDYLVWQMREVAYKARSMAWETDILRSQIFPVGKQE 618
Query: 189 KNVLKFLGKLRISLDLVTSNPPHLRHKIQDKDHGEQSTEMEKTRKDIEELREKMDVILVA 248
+ ++K L + R +I +++ GE+ ME+ ++++ E KM ++++
Sbjct: 619 QQLIKHLDE---------------RARIMEEEQGERMDRMERAQEEMREQLAKMMELMMS 678
Query: 249 LEKGKIIADISQSSNTMNDPPIRQSTESTTPKYHPLYNIPVEE-----HPY---PFFKNE 308
L KGK I + + + N P + P Y P + P + HP + N
Sbjct: 679 LSKGK--RAIEEPAPSENPPAQDSGNQRDDPSYPPGFTPPHAQTFQRVHPQVMPSIYYNA 738
Query: 309 QVSMHHQPGFSLPKEAP---PKVTITVPNLDDLEIRKEL-----TGGEKSSSSEKLEVME 368
+ HQP P P I VP+LDD + +++L GE +K +++E
Sbjct: 739 PPPLGHQPTHGQFGPYPGINPAEPINVPDLDDPKEQEKLRKDSSQTGENEKDQKKYDLLE 798
Query: 369 ERLRAVEGTDVFGNIDAAKLCLVPDVILPPKFKVAEFEKYDGASCPKNHLIMYCRKMAA 382
ERLRA+EG D FG +DA +LCLVPDV++P KFKV +FEKYDG CP H+ MYCRKMAA
Sbjct: 799 ERLRAIEGVDRFGTMDATELCLVPDVLIPAKFKVPKFEKYDGTKCPMAHITMYCRKMAA 838
BLAST of Lag0028468 vs. ExPASy TrEMBL
Match:
A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)
HSP 1 Score: 181.0 bits (458), Expect = 9.2e-42
Identity = 105/208 (50.48%), Postives = 137/208 (65.87%), Query Frame = 0
Query: 193 EQSTEMEKTRKDIEELREKMDVILVALEKGKIIADISQSSNTMND------------PPI 252
+Q E EKTRKDIEELREK+D I + LEKGK AD + SSN +++ PP+
Sbjct: 3 DQKAEQEKTRKDIEELREKLDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGPPL 62
Query: 253 RQSTESTTPK---YHPLYNIPVEEHPYPFFKNEQVSMHHQPGFSLPKE--APPKVTITVP 312
R E P+ Y+PLY++P+ ++P+ F K Q + F P++ +PP TV
Sbjct: 63 RPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQ-QIPTNIIFREPEQMMSPP----TVX 122
Query: 313 NLDDLEIRKELTGGEKSSSSEKLEVMEERLRAVEGTDVFGNIDAAKLCLVPDVILPPKFK 372
NL + + + + S EK EV+EERLRA+EGTDVFGNIDA++LCLV +++PPKFK
Sbjct: 123 NLGGXPAKTDPV-XQNAXSXEKXEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFK 182
Query: 373 VAEFEKYDGASCPKNHLIMYCRKMAAYV 384
V EFEKYDG+SCPKNHLIMYCRKM AYV
Sbjct: 183 VPEFEKYDGSSCPKNHLIMYCRKMXAYV 204
BLAST of Lag0028468 vs. ExPASy TrEMBL
Match:
A0A6J1D7T3 (uncharacterized protein LOC111017812 OS=Momordica charantia OX=3673 GN=LOC111017812 PE=4 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 1.3e-40
Identity = 105/206 (50.97%), Postives = 136/206 (66.02%), Query Frame = 0
Query: 193 EQSTEMEKTRKDIEELREKMDVILVALEKGKIIADISQSSNTMN------------DPPI 252
+Q E EK RKDIEELREK+DVIL+ALEKGK +AD + SSN ++ DPP+
Sbjct: 3 DQKAEQEKIRKDIEELREKLDVILLALEKGKTVADPTTSSNPVHDQQEIPPYPLGYDPPL 62
Query: 253 RQSTE---STTPKYHPLYNIPVEEHPYPFFKNEQVSMHHQPGFSLPKEAPPKVTITVPNL 312
R E Y+PLY+I V ++P PF K Q + F P++ P T+ NL
Sbjct: 63 RLVAEGFMQQNTTYNPLYDILVGQYPPPFVKGTQ-QIPTNIIFREPEQMMPPPTVL--NL 122
Query: 313 DDLEIRKELTGGEKSSSSEKLEVMEERLRAVEGTDVFGNIDAAKLCLVPDVILPPKFKVA 372
L ++ + G+ + S+EK EV+EERL AVEGTDVFGNIDA++LCL+ +++ KFKV
Sbjct: 123 GGLLVKTDPV-GQSTPSNEKFEVLEERLIAVEGTDVFGNIDASQLCLISGLVILLKFKVP 182
Query: 373 EFEKYDGASCPKNHLIMYCRKMAAYV 384
EFEKYDG+SCPKNHLIMYC+ MAAYV
Sbjct: 183 EFEKYDGSSCPKNHLIMYCKNMAAYV 204
BLAST of Lag0028468 vs. ExPASy TrEMBL
Match:
A0A6J1DM29 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia OX=3673 GN=LOC111022231 PE=4 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 3.0e-40
Identity = 107/217 (49.31%), Postives = 137/217 (63.13%), Query Frame = 0
Query: 193 EQSTEMEKTRKDIEELREKMDVILVALEKGKIIADISQSSNTMNDPPIRQSTESTTPK-- 252
++ +E EKTRKDIEELREK+D IL+ALEKGK IA ++SN +++PP Q P
Sbjct: 4 DRKSEQEKTRKDIEELREKLDAILLALEKGKTIA---ETSNPIHEPPTPQFPPGFEPSFR 63
Query: 253 -------------------YHPLYNIPVEEHPYPFFKNEQVSMHHQPG---FSLPKE--A 312
Y+PLY+IP + P P + P F P++ A
Sbjct: 64 PAGPSFRPMTEGFMSQYTTYNPLYDIPAGQFPPPLVRGPP----QAPAGIIFQEPEQVIA 123
Query: 313 PPKVTITVPNLDDLEIRKELTGGEKSSSSEKLEVMEERLRAVEGTDVFGNIDAAKLCLVP 372
PP TV NL + K+ +++ SSEKLEV+EERLRAVEGTDVFGNIDA++LCL
Sbjct: 124 PP----TVLNLGGPQANKD-PERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLXS 183
Query: 373 DVILPPKFKVAEFEKYDGASCPKNHLIMYCRKMAAYV 384
+++PPKFK+ EFEKYDG+SCPKNHLIMYCRKMAAY+
Sbjct: 184 GLVIPPKFKIPEFEKYDGSSCPKNHLIMYCRKMAAYI 208
BLAST of Lag0028468 vs. ExPASy TrEMBL
Match:
A0A061E378 (G-patch domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_008095 PE=4 SV=1)
HSP 1 Score: 149.8 bits (377), Expect = 2.3e-32
Identity = 130/441 (29.48%), Postives = 213/441 (48.30%), Query Frame = 0
Query: 9 EVSQAALKSRNDQVS-KQQYEIASLHELMKELKDCISLRNQTITEVEEK----NGTLCRT 68
E A KS + S KQ+YE L + +++K +S + + + ++E K N T
Sbjct: 439 ESELARKKSEAENASWKQRYE--DLQKECEKMKREVSEQRKKVQKMEGKYESLNDKFSAT 498
Query: 69 VDDLQLTLGIREDQLGELINDNKSLR-------DSVQSLNVRLE-----------QYDRL 128
+LQ + +RE+Q EL N LR +S+Q L E +Y+RL
Sbjct: 499 TSELQREIQVRENQGNELQTHNDGLRRQVRFQQESIQLLRQEYEELERVMTTYQQEYERL 558
Query: 129 RDDFGFV-------RKNHTTLQSKAEHMLTQVRKVTRKADELAEDAHTLSKVMAPTQPNS 188
+ + R+ +T ++ ++++ Q+R+V KA +A L + P
Sbjct: 559 KQQSTRIQEWGESYRQAYTEKYNQMDYLVWQMREVAYKARSMAWKTDILRSQIFPVGKQE 618
Query: 189 KNVLKFLGKLRI----------SLDLVTSNPP----------HLRHKIQDKDHGEQSTEM 248
+ ++K+L + I ++ + PP R +I +++ E+ M
Sbjct: 619 QQLIKYLDEHIIIHTCINHHFMAISSKIARPPKPSDERVHNTRQRARIMEQEQRERMDRM 678
Query: 249 EKTRKDIEELREKMDVILVALEKGK-IIADISQSSNTMNDPPIRQS-TESTTPKYHPLYN 308
E+ ++++ E KM ++++L KGK I + +QS N PP + S + P Y P +
Sbjct: 679 ERAQEEMREQLAKMMELMMSLSKGKRAIEEPAQSEN----PPAQDSGNQREDPPYPPGFT 738
Query: 309 IPVEE-----HPY---PFFKNEQVSMHHQP---GFSLPKEAPPKVTITVPNLDDLEIRKE 368
P + HP P + N + HQP F P +I +P+LDD + +++
Sbjct: 739 PPHAQTSQRVHPQVIPPVYYNAPPPLGHQPIHGQFGPYSGINPAESINIPDLDDPKEQEK 798
Query: 369 LTG-----GEKSSSSEKLEVMEERLRAVEGTDVFGNIDAAKLCLVPDVILPPKFKVAEFE 382
L G+ +K +++EERLRA+EG D FG +DA +LCLVPDV++P KFKV +FE
Sbjct: 799 LRNDSSQTGKNEKDQKKYDLLEERLRAIEGVDRFGTMDATELCLVPDVLIPAKFKVPKFE 858
BLAST of Lag0028468 vs. ExPASy TrEMBL
Match:
A0A061DPM2 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_003960 PE=4 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 6.6e-32
Identity = 120/419 (28.64%), Postives = 203/419 (48.45%), Query Frame = 0
Query: 9 EVSQAALKSRNDQVS-KQQYEIASLHELMKELKDCISLRNQTITEVEEK----NGTLCRT 68
E A KS + S KQ+YE L + +++K +S + + + ++E K N T
Sbjct: 439 ESELARKKSEAENASWKQRYE--DLQKECEKMKREVSQQRKKVQKMEGKYESLNDKFSAT 498
Query: 69 VDDLQLTLGIREDQLGELINDNKSLRDSV----QSLNVRLEQYDRL-------RDDFGFV 128
+LQ + ++E++ EL N LR V +S+ + ++Y+ L + ++ +
Sbjct: 499 TSELQREIQVKENRGNELQTHNDGLRRQVRFQQESIQILRQEYEELEGVMTTYQQEYESL 558
Query: 129 RKNHTTLQ--------------SKAEHMLTQVRKVTRKADELAEDAHTLSKVMAPTQPNS 188
++ T +Q + ++++ Q+R+V KA +A + L + P
Sbjct: 559 KQQSTRIQKWGESYRQAYTEKYDQMDYLVWQMREVAYKARSMAWETDILRSQIFPVGKQE 618
Query: 189 KNVLKFLGKLRISLDLVTSNPPHLRHKIQDKDHGEQSTEMEKTRKDIEELREKMDVILVA 248
+ ++K L + R +I +++ GE+ ME+ ++++ E KM ++++
Sbjct: 619 QQLIKHLDE---------------RARIMEEEQGERMDRMERAQEEMREQLAKMMELMMS 678
Query: 249 LEKGKIIADISQSSNTMNDPPIRQSTESTTPKYHPLYNIPVEE-----HPY---PFFKNE 308
L KGK I + + + N P + P Y P + P + HP + N
Sbjct: 679 LSKGK--RAIEEPAPSENPPAQDSGNQRDDPSYPPGFTPPHAQTFQRVHPQVMPSIYYNA 738
Query: 309 QVSMHHQPGFSLPKEAP---PKVTITVPNLDDLEIRKEL-----TGGEKSSSSEKLEVME 368
+ HQP P P I VP+LDD + +++L GE +K +++E
Sbjct: 739 PPPLGHQPTHGQFGPYPGINPAEPINVPDLDDPKEQEKLRKDSSQTGENEKDQKKYDLLE 798
Query: 369 ERLRAVEGTDVFGNIDAAKLCLVPDVILPPKFKVAEFEKYDGASCPKNHLIMYCRKMAA 382
ERLRA+EG D FG +DA +LCLVPDV++P KFKV +FEKYDG CP H+ MYCRKMAA
Sbjct: 799 ERLRAIEGVDRFGTMDATELCLVPDVLIPAKFKVPKFEKYDGTKCPMAHITMYCRKMAA 838
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157796.1 | 1.9e-41 | 50.48 | LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia] | [more] |
XP_022149382.1 | 2.7e-40 | 50.97 | uncharacterized protein LOC111017812 [Momordica charantia] | [more] |
XP_022155098.1 | 1.0e-39 | 48.85 | LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica ch... | [more] |
EOX99415.1 | 4.7e-32 | 29.48 | Uncharacterized protein TCM_008095 [Theobroma cacao] | [more] |
EOX94372.1 | 1.4e-31 | 28.64 | Uncharacterized protein TCM_003960 [Theobroma cacao] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DZ90 | 9.2e-42 | 50.48 | Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1 | [more] |
A0A6J1D7T3 | 1.3e-40 | 50.97 | uncharacterized protein LOC111017812 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A6J1DM29 | 3.0e-40 | 49.31 | LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia... | [more] |
A0A061E378 | 2.3e-32 | 29.48 | G-patch domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_008095 PE=4 ... | [more] |
A0A061DPM2 | 6.6e-32 | 28.64 | Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_003960 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |