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Lag0028467 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTGATCGCCTCAAAGTAACAGGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCATCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGACATGATCAAGACCATGATGAAGATAAGAGCTTTTAAAATGTAAAAGTTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAAATCATGAACTACGTTATGACTTGATCCCCATTCCACAAGGGTACGTAGGCAGCTTAAAAAAAACTTTAAGTTCAGTCTCTACAAACAAAAAAAAAGGCAACAAATAAGCACGACAATATAAGTTAAAAAAACTAATCACTACTAGGGGCAACACAACAAATTGAAGTTGTGCACCATTGTGAATGTGAAGTTATGAGTTGGATGAATAAAAGAAGACTTCATTCTTTCAAATTCAATGTCTCGCTCGCCTCAAGTTCGGTGTTTCCATTCACCTTAAGTTCGTTGCTCCTCTTCTCTCCAAGTTCAAGGGTTCTTACGATGTACGCTACTTGTGTTGTTCCTTCCTCAAAGTTCGAAGGTTCTCACGTCGCTTTGCTACAGTTCCTTCCTCAAAGTTCGAAGGTTCTCTCTCACGTCGCTACGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCATCCAAGTTCGAGGGTTCTCACACGTCGCTTCGATGCCAGTTCCTTCCTCCCAAATTCGAAGGTTCTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCAAGTCGTTGCGCTGCAATTCGTTCCTCCCAAATTCGAAGGTTCTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTACGCTGCAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGTCGATTCGCTACAGTTCTTTCCTCCCAAATTCGAAGGTTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCAAGTCGCTGCGCTGCAATTCGTTCCTCCCAAATTCGAAGGTTCTCACGTCGCTGCTTCGTTGCAGTTGCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTGCTTCCTCCAAGTTCAGAGGTTCTCAAGTCGCCCAAGTTCAAAGGTTCTCAAGTCGCTGCAGTTGCCTTCCTTCCTCCAAGCTCGAAGGTTCTCACGTCGCTTCGTTGTAGTTGCCTCTTCCTACCTCCAAAGCAAAGTTCGAAGGTGTGCCTCTTCCTACCTCCAAAGCAAAGTTCGAACTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTGGTGCTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGATTCATTCCTCCAAATTCAAAGGTTGCGCTTCGCTGCAGTTAG ATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTGATCGCCTCAAAGTAACAGGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCATCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGAAGACTTCATTCTTTCAAATTCAATGTCTCGCTCGCCTCAAGTTCGGTGTTTCCATTCACCTTAAGTTCGTTGCTCCTCTTCTCTCCAAGTTCAAGGGTTCTTACGATGTACGCTACTTGTGTTGTTCCTTCCTCAAAGTTCGAAGGTTCTCACGTCGCTTTGCTACAGTTCCTTCCTCAAAGTTCGAAGGTTCTCTCTCACGTCGCTACGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCATCCAAGTTCGAGGGTTCTCACACGTCGCTTCGATGCCAGTTCCTTCCTCCCAAATTCGAAGGTTCTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCAAGTCGTTGCGCTGCAATTCGTTCCTCCCAAATTCGAAGGTTCTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTACGCTGCAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGTCGATTCGCTACAGTTCTTTCCTCCCAAATTCGAAGGTTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCAAGTCGCTGCGCTGCAATTCGTTCCTCCCAAATTCGAAGGTTCTCACGTCGCTGCTTCGTTGCAGTTGCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTGCTTCCTCCAAGTTCAGAGGTTCTCAAGTCGCCCAAGTTCAAAGGTTCTCAAGTCGCTGCAGTTGCCTTCCTTCCTCCAAGCTCGAAGGTTCTCACGTCGCTTCGTTGTAGTTGCCTCTTCCTACCTCCAAAGCAAAGTTCGAAGGTGTGCCTCTTCCTACCTCCAAAGCAAAGTTCGAACTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTGGTGCTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGATTCATTCCTCCAAATTCAAAGGTTGCGCTTCGCTGCAGTTAG ATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTGATCGCCTCAAAGTAACAGGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCATCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGAAGACTTCATTCTTTCAAATTCAATGTCTCGCTCGCCTCAAGTTCGGTGTTTCCATTCACCTTAAGTTCGTTGCTCCTCTTCTCTCCAAGTTCAAGGGTTCTTACGATGTACGCTACTTGTGTTGTTCCTTCCTCAAAGTTCGAAGGTTCTCACGTCGCTTTGCTACAGTTCCTTCCTCAAAGTTCGAAGGTTCTCTCTCACGTCGCTACGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCATCCAAGTTCGAGGGTTCTCACACGTCGCTTCGATGCCAGTTCCTTCCTCCCAAATTCGAAGGTTCTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCAAGTCGTTGCGCTGCAATTCGTTCCTCCCAAATTCGAAGGTTCTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTACGCTGCAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGTCGATTCGCTACAGTTCTTTCCTCCCAAATTCGAAGGTTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCAAGTCGCTGCGCTGCAATTCGTTCCTCCCAAATTCGAAGGTTCTCACGTCGCTGCTTCGTTGCAGTTGCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTGCTTCCTCCAAGTTCAGAGGTTCTCAAGTCGCCCAAGTTCAAAGGTTCTCAAGTCGCTGCAGTTGCCTTCCTTCCTCCAAGCTCGAAGGTTCTCACGTCGCTTCGTTGTAGTTGCCTCTTCCTACCTCCAAAGCAAAGTTCGAAGGTGTGCCTCTTCCTACCTCCAAAGCAAAGTTCGAACTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTGGTGCTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGATTCATTCCTCCAAATTCAAAGGTTGCGCTTCGCTGCAGTTAG MFGVHLHSTFSFPKAKCLHIEEKSTFDICFDRLKVTGDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKKTSFFQIQCLARLKFGVSIHLKFVAPLLSKFKGSYDVRYLCCSFLKVRRFSRRFATVPSSKFEGSLSRRYAAVPSSKFKGSHVASLQFLHPSSRVLTRRFDASSFLPNSKVLSRASLQFLPPSSKVLKSLRCNSFLPNSKVLSRASLQFLPPSLKVLTSLRCSSFLQVRGFSRRFATVLSSQIRRFLTRFAAVPSSKFKGSQVAALQFVPPKFEGSHVAASLQLPSSKFEGSHALRCSCFLQVQRFSSRPSSKVLKSLQLPSFLQARRFSRRFVVVASSYLQSKVRRCASSYLQSKVRTPLQFLPPSSKVGALTRSAAVPSSKFEGFIPPNSKVALRCS Homology
BLAST of Lag0028467 vs. NCBI nr
Match: KAA0051997.1 (hypothetical protein E6C27_scaffold60G004810 [Cucumis melo var. makuwa] >TYK04562.1 hypothetical protein E5676_scaffold409G001950 [Cucumis melo var. makuwa]) HSP 1 Score: 78.6 bits (192), Expect = 1.5e-10 Identity = 41/82 (50.00%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Lag0028467 vs. NCBI nr
Match: TYK30948.1 (hypothetical protein E5676_scaffold455G001730 [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 2.8e-09 Identity = 41/78 (52.56%), Postives = 48/78 (61.54%), Query Frame = 0
BLAST of Lag0028467 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 67.8 bits (164), Expect = 2.6e-07 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of Lag0028467 vs. NCBI nr
Match: KAA0032121.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 67.8 bits (164), Expect = 2.6e-07 Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of Lag0028467 vs. NCBI nr
Match: KAA0068201.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK21121.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 67.8 bits (164), Expect = 2.6e-07 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of Lag0028467 vs. ExPASy TrEMBL
Match: A0A5A7UC34 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001950 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 7.1e-11 Identity = 41/82 (50.00%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Lag0028467 vs. ExPASy TrEMBL
Match: A0A5D3E580 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001730 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-09 Identity = 41/78 (52.56%), Postives = 48/78 (61.54%), Query Frame = 0
BLAST of Lag0028467 vs. ExPASy TrEMBL
Match: A0A5A7VRG7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G001010 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-07 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of Lag0028467 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-07 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of Lag0028467 vs. ExPASy TrEMBL
Match: A0A5A7SRE2 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00210 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-07 Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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