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Lag0028466 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCTTGGATTTCCAGAAGCGGAGAACAGAGGGGTTCCGAATCCCGAGGAGCTCGTAAATTTGCATCATCACCAGAATCCGCAACATTACTATTTTATGGACGGACGGCCCAATAGGATTCCGTATTACGCGGCGGCGGCGGCCCAGGACCGGCGGAAGGTGGAGTACACGCGCTCCCTCTCGCAGGGGACGGCGCGGCGGTTGGTGCCGGCCGCCACCTACCTCGGGGTTCTGGTGTGTCTGGCGGCGTCGCTGTTGATCCTGCCGTTGATCCTTCCGCCGCTGCCGCCGCCGCCGTTGATGCTGCTGCTGCTGCTTCCGATTGGGATCTTGGGAATGCTTATGGTGTTGGCGTTTATGCCTTCCAATGACACTAAGGATATCGCCTCCTCCTCTCATACGTATATGTAA ATGAGTCTTGGATTTCCAGAAGCGGAGAACAGAGGGGTTCCGAATCCCGAGGAGCTCGTAAATTTGCATCATCACCAGAATCCGCAACATTACTATTTTATGGACGGACGGCCCAATAGGATTCCGTATTACGCGGCGGCGGCGGCCCAGGACCGGCGGAAGGTGGAGTACACGCGCTCCCTCTCGCAGGGGACGGCGCGGCGGTTGGTGCCGGCCGCCACCTACCTCGGGGTTCTGGTGTGTCTGGCGGCGTCGCTGTTGATCCTGCCGTTGATCCTTCCGCCGCTGCCGCCGCCGCCGTTGATGCTGCTGCTGCTGCTTCCGATTGGGATCTTGGGAATGCTTATGGTGTTGGCGTTTATGCCTTCCAATGACACTAAGGATATCGCCTCCTCCTCTCATACGTATATGTAA ATGAGTCTTGGATTTCCAGAAGCGGAGAACAGAGGGGTTCCGAATCCCGAGGAGCTCGTAAATTTGCATCATCACCAGAATCCGCAACATTACTATTTTATGGACGGACGGCCCAATAGGATTCCGTATTACGCGGCGGCGGCGGCCCAGGACCGGCGGAAGGTGGAGTACACGCGCTCCCTCTCGCAGGGGACGGCGCGGCGGTTGGTGCCGGCCGCCACCTACCTCGGGGTTCTGGTGTGTCTGGCGGCGTCGCTGTTGATCCTGCCGTTGATCCTTCCGCCGCTGCCGCCGCCGCCGTTGATGCTGCTGCTGCTGCTTCCGATTGGGATCTTGGGAATGCTTATGGTGTTGGCGTTTATGCCTTCCAATGACACTAAGGATATCGCCTCCTCCTCTCATACGTATATGTAA MSLGFPEAENRGVPNPEELVNLHHHQNPQHYYFMDGRPNRIPYYAAAAAQDRRKVEYTRSLSQGTARRLVPAATYLGVLVCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDIASSSHTYM Homology
BLAST of Lag0028466 vs. NCBI nr
Match: KGN61450.1 (hypothetical protein Csa_006551 [Cucumis sativus]) HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45 Identity = 112/147 (76.19%), Postives = 119/147 (80.95%), Query Frame = 0
BLAST of Lag0028466 vs. NCBI nr
Match: XP_038875191.1 (ARGOS-like protein [Benincasa hispida]) HSP 1 Score: 182.6 bits (462), Expect = 2.3e-42 Identity = 112/150 (74.67%), Postives = 122/150 (81.33%), Query Frame = 0
BLAST of Lag0028466 vs. NCBI nr
Match: XP_022974015.1 (ARGOS-like protein [Cucurbita maxima] >XP_022974016.1 ARGOS-like protein [Cucurbita maxima]) HSP 1 Score: 179.5 bits (454), Expect = 2.0e-41 Identity = 104/147 (70.75%), Postives = 116/147 (78.91%), Query Frame = 0
BLAST of Lag0028466 vs. NCBI nr
Match: KAG6601768.1 (hypothetical protein SDJN03_07001, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174.5 bits (441), Expect = 6.4e-40 Identity = 104/152 (68.42%), Postives = 116/152 (76.32%), Query Frame = 0
BLAST of Lag0028466 vs. NCBI nr
Match: XP_022930113.1 (ARGOS-like protein [Cucurbita moschata]) HSP 1 Score: 171.4 bits (433), Expect = 5.4e-39 Identity = 99/142 (69.72%), Postives = 111/142 (78.17%), Query Frame = 0
BLAST of Lag0028466 vs. ExPASy Swiss-Prot
Match: Q8RXL7 (ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.4e-13 Identity = 61/127 (48.03%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of Lag0028466 vs. ExPASy Swiss-Prot
Match: C7SFP6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARGOS PE=2 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-08 Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of Lag0028466 vs. ExPASy Swiss-Prot
Match: Q6NMD6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3702 GN=ARGOS PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.1e-08 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0
BLAST of Lag0028466 vs. ExPASy Swiss-Prot
Match: Q7X6L2 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica OX=39947 GN=ARGOS PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.1e-05 Identity = 29/46 (63.04%), Postives = 40/46 (86.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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