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Lag0028460 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCATGTCTTTCACCGCCATCCTCTTCATCTTCTTCTTCACATCTCCGCCCGCCGCCCAATCACCTCCGCCACCCAAGCCCCGCAACTTCTCCACCTTCTCAATCTCCCATTCCCCATGGCGGCCATCCCAAAATCTCATTATCTTCTCCCCCAACTCCCTCTTCACCGCCGGCTTCCGGCCACTACCAAACAACTCCAATCTCTTCGTCTTCTCCGTTTGGTACTTCAACAACTCAACAGACGCCATCGTTTGGTCCGCCAATCTTCTTTCTCCGGTTAACCGCTCGGCGGCTTTGTCCATCACGGCCACCGGCCAACTCTATCTCGACAACGGCACCGGCCGCAATCTCTGGCCTTCCACTGTTTTTGGGAATCCAAATTCGACCCGATTAATCCTTCGCGACGATGGTGATTTGATTTACGCGACGATGGTGATTTGA ATGATCATGTCTTTCACCGCCATCCTCTTCATCTTCTTCTTCACATCTCCGCCCGCCGCCCAATCACCTCCGCCACCCAAGCCCCGCAACTTCTCCACCTTCTCAATCTCCCATTCCCCATGGCGGCCATCCCAAAATCTCATTATCTTCTCCCCCAACTCCCTCTTCACCGCCGGCTTCCGGCCACTACCAAACAACTCCAATCTCTTCGTCTTCTCCGTTTGGTACTTCAACAACTCAACAGACGCCATCGTTTGGTCCGCCAATCTTCTTTCTCCGGTTAACCGCTCGGCGGCTTTGTCCATCACGGCCACCGGCCAACTCTATCTCGACAACGGCACCGGCCGCAATCTCTGGCCTTCCACTGTTTTTGGGAATCCAAATTCGACCCGATTAATCCTTCGCGACGATGGTGATTTGATTTACGCGACGATGGTGATTTGA ATGATCATGTCTTTCACCGCCATCCTCTTCATCTTCTTCTTCACATCTCCGCCCGCCGCCCAATCACCTCCGCCACCCAAGCCCCGCAACTTCTCCACCTTCTCAATCTCCCATTCCCCATGGCGGCCATCCCAAAATCTCATTATCTTCTCCCCCAACTCCCTCTTCACCGCCGGCTTCCGGCCACTACCAAACAACTCCAATCTCTTCGTCTTCTCCGTTTGGTACTTCAACAACTCAACAGACGCCATCGTTTGGTCCGCCAATCTTCTTTCTCCGGTTAACCGCTCGGCGGCTTTGTCCATCACGGCCACCGGCCAACTCTATCTCGACAACGGCACCGGCCGCAATCTCTGGCCTTCCACTGTTTTTGGGAATCCAAATTCGACCCGATTAATCCTTCGCGACGATGGTGATTTGATTTACGCGACGATGGTGATTTGA MIMSFTAILFIFFFTSPPAAQSPPPPKPRNFSTFSISHSPWRPSQNLIIFSPNSLFTAGFRPLPNNSNLFVFSVWYFNNSTDAIVWSANLLSPVNRSAALSITATGQLYLDNGTGRNLWPSTVFGNPNSTRLILRDDGDLIYATMVI Homology
BLAST of Lag0028460 vs. NCBI nr
Match: XP_022146471.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Momordica charantia]) HSP 1 Score: 213.4 bits (542), Expect = 1.3e-51 Identity = 105/145 (72.41%), Postives = 120/145 (82.76%), Query Frame = 0
BLAST of Lag0028460 vs. NCBI nr
Match: XP_038906503.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Benincasa hispida]) HSP 1 Score: 212.6 bits (540), Expect = 2.3e-51 Identity = 106/137 (77.37%), Postives = 118/137 (86.13%), Query Frame = 0
BLAST of Lag0028460 vs. NCBI nr
Match: XP_022963411.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbita moschata] >KAG7032585.1 G-type lectin S-receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 210.3 bits (534), Expect = 1.1e-50 Identity = 105/137 (76.64%), Postives = 119/137 (86.86%), Query Frame = 0
BLAST of Lag0028460 vs. NCBI nr
Match: XP_022990843.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbita maxima]) HSP 1 Score: 209.9 bits (533), Expect = 1.5e-50 Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 0
BLAST of Lag0028460 vs. NCBI nr
Match: XP_022993326.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Cucurbita maxima]) HSP 1 Score: 208.4 bits (529), Expect = 4.3e-50 Identity = 112/152 (73.68%), Postives = 122/152 (80.26%), Query Frame = 0
BLAST of Lag0028460 vs. ExPASy Swiss-Prot
Match: O64777 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61430 OS=Arabidopsis thaliana OX=3702 GN=At1g61430 PE=2 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 2.3e-06 Identity = 39/121 (32.23%), Postives = 59/121 (48.76%), Query Frame = 0
BLAST of Lag0028460 vs. ExPASy Swiss-Prot
Match: Q25AG2 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK4 PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.2e-04 Identity = 38/145 (26.21%), Postives = 58/145 (40.00%), Query Frame = 0
BLAST of Lag0028460 vs. ExPASy Swiss-Prot
Match: Q7FAZ0 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK4 PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.2e-04 Identity = 38/145 (26.21%), Postives = 58/145 (40.00%), Query Frame = 0
BLAST of Lag0028460 vs. ExPASy Swiss-Prot
Match: Q9SXB4 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana OX=3702 GN=At1g11300 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.7e-04 Identity = 27/81 (33.33%), Postives = 41/81 (50.62%), Query Frame = 0
BLAST of Lag0028460 vs. ExPASy Swiss-Prot
Match: O64771 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS=Arabidopsis thaliana OX=3702 GN=At1g61480 PE=2 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 4.8e-04 Identity = 30/92 (32.61%), Postives = 45/92 (48.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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