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Lag0028451 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGATGGATTTGGCTCGGGCATTCAACGGATTGGACTGCGACGAGTCAGGGCGAGTCATCGTGCTCTCTGGTTTAGGTCGAGCATTATGTTCCTATGTAAACCTTAATGCAATGGAGGACGTCTTCAAGGGAGATGCGAAGGATGTTGAATCCCATCCGGTTGTGCAAATGGAACGCTGCCGGAAGCCGATCATCAGAGCGATTGCAGGTTTGCCATCACCGCTGGGTTTTAGCGATTGCGGGTTTTCATTTTACTAAGTTCACCCATTTTTTTGTGCGCTCGAGTTATTCTTATTATTTGCTAGCGTTATGGCAATTGCGATTTAGAATCAAGAATGTGTGATTTTTTGAAATCTATTGGCAATGATGTTCTAGTGAAATTTCTAATTTCCGGACAAATCTATGGCAGATTTAGGATATTTCCTTCATGGGTATTATCTCAGAAACTCCCAAGGATCATCAGAATTAATAAAGCTCCTGAAGTATCCCTAACGACCTTCTTCACCGCTCTTCGAAGATTGAATAAGCCCTAGTGAATTTTTAGTCACAAATTCGGTGCGATGGGACAGATCTAGTACTCCGAGAAGTATTTCAATGATACCTATGAGTACAGGTCTGTGGTTCCTCATCGTCATCTGTTTTTCGATTCAGAATTTTTGTTTCTCTGGCTTTTTCCATTGCGGTTGGTTGATTTTCATGGTTTTTTGTTTTCGTCTGTTATATAGGCATGTGGTGCTTCCTCCTGAAGTAGCGAAACTTCTTCCTAAGAATCGCCTTCTTTCTGAAGTAAGTAATACTTCATGATTCTCCTGTATATTAAAATTTCTTGTGTGGAATCCTGTTCCGGTGATTGGTAATGAAATTTAAATGGATACTCATGATTCTCGTGTATCAGAATTTCTTGTACAAAATCTCGTTCTGCTAATCGGATATGAAATAAAATTGAAAGAGAGATATCTAATACTGAGAGCCCTAGCGATTTCTCAATTCAAGAACATTCCAAAACTTGGAATCATAGATTGTGGTGCATAATCATCAGGTGCATTTCCTCTAATTGATTTTGATTGTGATACAATGTGAATAGTTAGAATTTTGTGTAATTTGATTGCGTGGTGATGGTCAGAATGAATGGCGAGCGATTGGGGTTCAATAG ATGATGATGGATTTGGCTCGGGCATTCAACGGATTGGACTGCGACGAGTCAGGGCGAGTCATCGTGCTCTCTGGTTTAGGTCGAGCATTATGTTCCTATGTAAACCTTAATGCAATGGAGGACGTCTTCAAGGGAGATGCGAAGGATGTTGAATCCCATCCGGTTGTGCAAATGGAACGCTGCCGGAAGCCGATCATCAGAGCGATTGCAGATTTAGGATATTTCCTTCATGGGTATTATCTCAGAAACTCCCAAGGATCATCAGAATTAATAAAGCTCCTGAAGCATGTGGTGCTTCCTCCTGAAGTAGCGAAACTTCTTCCTAAGAATCGCCTTCTTTCTGAAAATGAATGGCGAGCGATTGGGGTTCAATAG ATGATGATGGATTTGGCTCGGGCATTCAACGGATTGGACTGCGACGAGTCAGGGCGAGTCATCGTGCTCTCTGGTTTAGGTCGAGCATTATGTTCCTATGTAAACCTTAATGCAATGGAGGACGTCTTCAAGGGAGATGCGAAGGATGTTGAATCCCATCCGGTTGTGCAAATGGAACGCTGCCGGAAGCCGATCATCAGAGCGATTGCAGATTTAGGATATTTCCTTCATGGGTATTATCTCAGAAACTCCCAAGGATCATCAGAATTAATAAAGCTCCTGAAGCATGTGGTGCTTCCTCCTGAAGTAGCGAAACTTCTTCCTAAGAATCGCCTTCTTTCTGAAAATGAATGGCGAGCGATTGGGGTTCAATAG MMMDLARAFNGLDCDESGRVIVLSGLGRALCSYVNLNAMEDVFKGDAKDVESHPVVQMERCRKPIIRAIADLGYFLHGYYLRNSQGSSELIKLLKHVVLPPEVAKLLPKNRLLSENEWRAIGVQ Homology
BLAST of Lag0028451 vs. NCBI nr
Match: XP_038876166.1 (probable enoyl-CoA hydratase 1, peroxisomal [Benincasa hispida]) HSP 1 Score: 105.5 bits (262), Expect = 3.3e-19 Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Lag0028451 vs. NCBI nr
Match: XP_023006284.1 (probable enoyl-CoA hydratase 1, peroxisomal isoform X2 [Cucurbita maxima]) HSP 1 Score: 105.5 bits (262), Expect = 3.3e-19 Identity = 53/70 (75.71%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Lag0028451 vs. NCBI nr
Match: XP_023006283.1 (probable enoyl-CoA hydratase 1, peroxisomal isoform X1 [Cucurbita maxima]) HSP 1 Score: 105.5 bits (262), Expect = 3.3e-19 Identity = 53/70 (75.71%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Lag0028451 vs. NCBI nr
Match: XP_023548460.1 (probable enoyl-CoA hydratase 1, peroxisomal [Cucurbita pepo subsp. pepo]) HSP 1 Score: 105.1 bits (261), Expect = 4.3e-19 Identity = 53/70 (75.71%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Lag0028451 vs. NCBI nr
Match: KAG6575117.1 (putative enoyl-CoA hydratase 1, peroxisomal, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 104.4 bits (259), Expect = 7.3e-19 Identity = 53/70 (75.71%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Lag0028451 vs. ExPASy Swiss-Prot
Match: Q6NL24 (Probable enoyl-CoA hydratase 1, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ECHIA PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17 Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of Lag0028451 vs. ExPASy Swiss-Prot
Match: O23249 (Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CKS1 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-09 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Lag0028451 vs. ExPASy Swiss-Prot
Match: A2XCH8 (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica OX=39946 GN=CKS1 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-09 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Lag0028451 vs. ExPASy Swiss-Prot
Match: Q6PS57 (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CKS1 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-09 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Lag0028451 vs. ExPASy Swiss-Prot
Match: Q9SJJ5 (Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CKS2 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08 Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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