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Lag0028446 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCTGTTTTGTTTCACTGAATTCATTGATGCGTGTGCTTTTCTTGACTGCAGTGGAGGCCTACATCTGAAGCGTGACATAACAGAATATGGAGATTTTGTGCGCAGTTTCAATGCTCCTTCTGTTGATGAGAAATTTGAGTTACTGGGAATGTAAGTGGAATGTTTCCAGATGTTTGACATTAACATCATCATCCATTTTTAATGGCTAATCTCTTGTTTTTCCAGCATGGCCAATGTCTTTATTGTTGCTCCTGAAAGCCTCTCATCTCTGTTTGAGGGCACCCCGAGTATTCGGAAAGATGCGCAAAGGTATTTGTTAAGATCTCGTCGAAGTACAGCTTGTAGAGTAGATCTGTTGGAAATTTATGTGAGTGTAGACTTAGGGTGAGTCATCTAAAAATGATTCTACAGATACTAAATTAACTATTTAGGTTATTAAGTGATTTTCGGCTAATCACTTTTTGAATAATGAACTTTAAACTGATTCCTTAAATTATAATTCTAAACCTACTTGATTATTTGAAAATGATTTTATTTGCTACCTGACCCCTTAGATTAAAATAATTAGCACCTTTGACTGTCCAAAATCACTTAGAAAGTTAATCCAAACCCACGCTTACTGTCACGCCTAATATCACTTTATCTCTTTCTAGAATTCATATTAAAGTGTGAAATTCCAGTCTCTATTCTTAAACTAAAAATACACATTTTATCATGTTTCCCTTGTTACCCCCATCCTACTCTAGCTTGCATTATCCCCTGAACCCTAATATAGGTATCAGCAGCTACAAGAACTAATCTTCAAATTTGACCTCTTAATGTTTCTATCCCAAAAAATAAGAAATAATCTTCAAATGTGGGAGCTCATCATGATTACTATTAAAATTTAGTGCAATTTCTGGCACCTTGTTCTTTGTGATGATATGAACTTGTTTGTCTGGAAAATCAGGTTCATCCAGCTTAGAGAGGATTACAAGAGTGCAAAACTCGCAACCCGACTTAGTTCTCTGTGGCCAAGCTCAAGTTGA ATGCCTCTGTTTTGTTTCACTGAATTCATTGATGCGTGTGCTTTTCTTGACTGCAGTGGAGGCCTACATCTGAAGCGTGACATAACAGAATATGGAGATTTTGTGCGCAGTTTCAATGCTCCTTCTGTTGATGAGAAATTTGAGTTACTGGGAATCATGGCCAATGTCTTTATTGTTGCTCCTGAAAGCCTCTCATCTCTGTTTGAGGGCACCCCGAGTATTCGGAAAGATGCGCAAAGGTTCATCCAGCTTAGAGAGGATTACAAGAGTGCAAAACTCGCAACCCGACTTAGTTCTCTGTGGCCAAGCTCAAGTTGA ATGCCTCTGTTTTGTTTCACTGAATTCATTGATGCGTGTGCTTTTCTTGACTGCAGTGGAGGCCTACATCTGAAGCGTGACATAACAGAATATGGAGATTTTGTGCGCAGTTTCAATGCTCCTTCTGTTGATGAGAAATTTGAGTTACTGGGAATCATGGCCAATGTCTTTATTGTTGCTCCTGAAAGCCTCTCATCTCTGTTTGAGGGCACCCCGAGTATTCGGAAAGATGCGCAAAGGTTCATCCAGCTTAGAGAGGATTACAAGAGTGCAAAACTCGCAACCCGACTTAGTTCTCTGTGGCCAAGCTCAAGTTGA MPLFCFTEFIDACAFLDCSGGLHLKRDITEYGDFVRSFNAPSVDEKFELLGIMANVFIVAPESLSSLFEGTPSIRKDAQRFIQLREDYKSAKLATRLSSLWPSSS Homology
BLAST of Lag0028446 vs. NCBI nr
Match: XP_010536964.1 (PREDICTED: exocyst complex component SEC10 [Tarenaya hassleriana]) HSP 1 Score: 167.2 bits (422), Expect = 7.8e-38 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Lag0028446 vs. NCBI nr
Match: KAF7801284.1 (exocyst complex component SEC10b [Senna tora]) HSP 1 Score: 167.2 bits (422), Expect = 7.8e-38 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Lag0028446 vs. NCBI nr
Match: KAG5538307.1 (hypothetical protein RHGRI_019038 [Rhododendron griersonianum]) HSP 1 Score: 167.2 bits (422), Expect = 7.8e-38 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Lag0028446 vs. NCBI nr
Match: KAG5538306.1 (hypothetical protein RHGRI_019038 [Rhododendron griersonianum]) HSP 1 Score: 167.2 bits (422), Expect = 7.8e-38 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Lag0028446 vs. NCBI nr
Match: KAF7139382.1 (hypothetical protein RHSIM_Rhsim07G0010700 [Rhododendron simsii]) HSP 1 Score: 167.2 bits (422), Expect = 7.8e-38 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Lag0028446 vs. ExPASy Swiss-Prot
Match: X5JA13 (Exocyst complex component SEC10a OS=Arabidopsis thaliana OX=3702 GN=SEC10a PE=1 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 8.4e-35 Identity = 73/87 (83.91%), Postives = 80/87 (91.95%), Query Frame = 0
BLAST of Lag0028446 vs. ExPASy Swiss-Prot
Match: X5JB51 (Exocyst complex component SEC10b OS=Arabidopsis thaliana OX=3702 GN=SEC10b PE=1 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 8.4e-35 Identity = 73/87 (83.91%), Postives = 80/87 (91.95%), Query Frame = 0
BLAST of Lag0028446 vs. ExPASy Swiss-Prot
Match: Q2QV94 (Exocyst complex component 5 OS=Oryza sativa subsp. japonica OX=39947 GN=SEC10 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 5.4e-34 Identity = 70/82 (85.37%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of Lag0028446 vs. ExPASy Swiss-Prot
Match: O00471 (Exocyst complex component 5 OS=Homo sapiens OX=9606 GN=EXOC5 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.7e-07 Identity = 29/84 (34.52%), Postives = 42/84 (50.00%), Query Frame = 0
BLAST of Lag0028446 vs. ExPASy Swiss-Prot
Match: Q3TPX4 (Exocyst complex component 5 OS=Mus musculus OX=10090 GN=Exoc5 PE=1 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 5.7e-07 Identity = 29/84 (34.52%), Postives = 42/84 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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