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Lag0028429 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTTGAGGACATGATGAACCAATGGGAGAGTTTCAATCTTACCAATGAGGAAGAATACACGGCGGTTGAAATTGATCGGCAGGCGGCAGAAATTACGGCAAACTCACTGGGTGCAAGTTTAATTGGGAAATTAGTGGCTCCTCGTATCATATCCGGCGAGGTCATGCAGAAAACCTTCAAAGCAGCTGAGTGGAACATTCCCACCGGTCTTGTAGTGGAGAAGATTGAGACTAACCTCTTTCTCTTCACTCTTCGATCGGAGGAGGAACTTTACGGGTTATTCGCCAGGGGTCATGGCTATTTGATAAATTTCTTCTTGTTTTATCCAAGGCAGTACCGATGGTGAAGCCCGTTGATATAGAATTCAAATACTCACCTTTCTGGGTACATTTTTGCCAATTGCCGATGGATTTATACAACAATTCGATGGTTGAATGATTAGGCAATGCAATCGAAAGATTCGAAGAGTATGATAGCAGCGAGCGACGATTTGGTTGGAAAGAGAGTCTGCGAGTGCAAGTAATCCTTGATATAACAAAGCCATTGCACAAATGCATCAAGGTTAACATCGATGGACCTGTGGGAAGTTGCTAGACGCCCATCCGATACGAGAAGTTATCATAATTATGTTCATTTTGTTGCATAATTGGGCATAATGTTAAGGATTGTAGCTCGTATTTTCAGGGGGAAGGATCGTCAGAACAGAAACATCAATATGGTATGTGGATGCAGTATTCTGGCCGCTCATCGTCTCTATTTCGCTCTCCAAGCAACAGTCCCCTGAGTCCGAATCGGATGCTGATTGATCGAGAGTCATGGAGACAAAGGGATATTTCTCCATCTCCAAAAATTGCTCAAGTAGTGGGCACATCAAGCGGGAAGAAGGGTGGTGACCAATCGTCGCCGACGGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCAGGCGCAAAATCCATGGACATCTCATCGGTGGCCGGAGAGTCAGGCACAATTCCGAAAATTACTCCTACATTTAATAACACCATTAATGCTGAAGGGTTGACCACGAAGGTAACGGAAACGCTGAAGGCCAAAAAACGTCTGGAGTATGCAAAAAATTTTGGGGAGCAATCAAAGTCAATCATGAATGGAAATTCCGCTGTGATTAATCAGTCGCCGGGGATCTTTAAATTAGAAATGGAGAAAATGCAGTCGGTCAGTTATGCATAA ATGGCTCTTGAGGACATGATGAACCAATGGGAGAGTTTCAATCTTACCAATGAGGAAGAATACACGGCGGTTGAAATTGATCGGCAGGCGGCAGAAATTACGGCAAACTCACTGGGTGCAAGTTTAATTGGGAAATTAGTGGCTCCTCGTATCATATCCGGCGAGGTCATGCAGAAAACCTTCAAAGCAGCTGAGTGGAACATTCCCACCGGTCTTGTAGTGGAGAAGATTGAGACTAACCTCTTTCTCTTCACTCTTCGATCGGAGGAGGAACTTTACGGGTTATTCGCCAGGGGCAATGCAATCGAAAGATTCGAAGAGTATGATAGCAGCGAGCGACGATTTGGTTGGAAAGAGAGTCTGCGAGTGCAAGTAATCCTTGATATAACAAAGCCATTGCACAAATGCATCAAGGGGGAAGGATCGTCAGAACAGAAACATCAATATGGTATGTGGATGCAGTATTCTGGCCGCTCATCGTCTCTATTTCGCTCTCCAAGCAACAGTCCCCTGAGTCCGAATCGGATGCTGATTGATCGAGAGTCATGGAGACAAAGGGATATTTCTCCATCTCCAAAAATTGCTCAAGTAGTGGGCACATCAAGCGGGAAGAAGGGTGGCGCAAAATCCATGGACATCTCATCGGTGGCCGGAGAGTCAGGCACAATTCCGAAAATTACTCCTACATTTAATAACACCATTAATGCTGAAGGGTTGACCACGAAGGTAACGGAAACGCTGAAGGCCAAAAAACGTCTGGAGTATGCAAAAAATTTTGGGGAGCAATCAAAGTCAATCATGAATGGAAATTCCGCTGTGATTAATCAGTCGCCGGGGATCTTTAAATTAGAAATGGAGAAAATGCAGTCGGTCAGTTATGCATAA ATGGCTCTTGAGGACATGATGAACCAATGGGAGAGTTTCAATCTTACCAATGAGGAAGAATACACGGCGGTTGAAATTGATCGGCAGGCGGCAGAAATTACGGCAAACTCACTGGGTGCAAGTTTAATTGGGAAATTAGTGGCTCCTCGTATCATATCCGGCGAGGTCATGCAGAAAACCTTCAAAGCAGCTGAGTGGAACATTCCCACCGGTCTTGTAGTGGAGAAGATTGAGACTAACCTCTTTCTCTTCACTCTTCGATCGGAGGAGGAACTTTACGGGTTATTCGCCAGGGGCAATGCAATCGAAAGATTCGAAGAGTATGATAGCAGCGAGCGACGATTTGGTTGGAAAGAGAGTCTGCGAGTGCAAGTAATCCTTGATATAACAAAGCCATTGCACAAATGCATCAAGGGGGAAGGATCGTCAGAACAGAAACATCAATATGGTATGTGGATGCAGTATTCTGGCCGCTCATCGTCTCTATTTCGCTCTCCAAGCAACAGTCCCCTGAGTCCGAATCGGATGCTGATTGATCGAGAGTCATGGAGACAAAGGGATATTTCTCCATCTCCAAAAATTGCTCAAGTAGTGGGCACATCAAGCGGGAAGAAGGGTGGCGCAAAATCCATGGACATCTCATCGGTGGCCGGAGAGTCAGGCACAATTCCGAAAATTACTCCTACATTTAATAACACCATTAATGCTGAAGGGTTGACCACGAAGGTAACGGAAACGCTGAAGGCCAAAAAACGTCTGGAGTATGCAAAAAATTTTGGGGAGCAATCAAAGTCAATCATGAATGGAAATTCCGCTGTGATTAATCAGTCGCCGGGGATCTTTAAATTAGAAATGGAGAAAATGCAGTCGGTCAGTTATGCATAA MALEDMMNQWESFNLTNEEEYTAVEIDRQAAEITANSLGASLIGKLVAPRIISGEVMQKTFKAAEWNIPTGLVVEKIETNLFLFTLRSEEELYGLFARGNAIERFEEYDSSERRFGWKESLRVQVILDITKPLHKCIKGEGSSEQKHQYGMWMQYSGRSSSLFRSPSNSPLSPNRMLIDRESWRQRDISPSPKIAQVVGTSSGKKGGAKSMDISSVAGESGTIPKITPTFNNTINAEGLTTKVTETLKAKKRLEYAKNFGEQSKSIMNGNSAVINQSPGIFKLEMEKMQSVSYA Homology
BLAST of Lag0028429 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 83.2 bits (204), Expect = 4.1e-12 Identity = 57/186 (30.65%), Postives = 85/186 (45.70%), Query Frame = 0
BLAST of Lag0028429 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 83.2 bits (204), Expect = 4.1e-12 Identity = 79/298 (26.51%), Postives = 116/298 (38.93%), Query Frame = 0
BLAST of Lag0028429 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia]) HSP 1 Score: 70.5 bits (171), Expect = 2.8e-08 Identity = 57/190 (30.00%), Postives = 81/190 (42.63%), Query Frame = 0
BLAST of Lag0028429 vs. NCBI nr
Match: XP_035551148.1 (uncharacterized protein LOC118349711 [Juglans regia]) HSP 1 Score: 55.8 bits (133), Expect = 7.1e-04 Identity = 51/193 (26.42%), Postives = 73/193 (37.82%), Query Frame = 0
BLAST of Lag0028429 vs. NCBI nr
Match: XP_035551145.1 (uncharacterized protein LOC118349709 [Juglans regia]) HSP 1 Score: 55.8 bits (133), Expect = 7.1e-04 Identity = 51/193 (26.42%), Postives = 73/193 (37.82%), Query Frame = 0
BLAST of Lag0028429 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.0e-12 Identity = 57/186 (30.65%), Postives = 85/186 (45.70%), Query Frame = 0
BLAST of Lag0028429 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.0e-12 Identity = 79/298 (26.51%), Postives = 116/298 (38.93%), Query Frame = 0
BLAST of Lag0028429 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-08 Identity = 57/190 (30.00%), Postives = 81/190 (42.63%), Query Frame = 0
BLAST of Lag0028429 vs. ExPASy TrEMBL
Match: A0A803LK12 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-05 Identity = 52/188 (27.66%), Postives = 80/188 (42.55%), Query Frame = 0
BLAST of Lag0028429 vs. ExPASy TrEMBL
Match: A0A803M810 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-04 Identity = 58/240 (24.17%), Postives = 94/240 (39.17%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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