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Lag0028428 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCAGAGGAAGTGGCTGGGGAAAAGCAACCAGCAGGCCCTGAAGAAGGAAAAAGTTCGGAACAAGGAGATCAACTTGTCAAAACTCAGTAGGAAATACAAGATAAGAGGGCAGAGGATATGCCATAGCAAGGGGATCGTCAAGAAGTTCAAGAATAGAAGGTCCAGGAAGAAGTTGTGCGGGAACCACGACGTCGTCGCCGCTGCAAGAAAAAGGCTGGACGAATTAAGAGGGTTTAGAGTTTATGGTTTAGGGAATCAGAGAAGGAAAACACAGAAAAAGAGGATCAAGAGAAGGAAGAGATTGAAAAGAAAGCTGAAGAAGAAGCCATGGCGAAGCAAGAAGAAGATAGAGGCAAAGGAGTTGCCGAAGCAACAGACGAAGCAGAGAAAGACGAAATTGAGGAACCGAGGTTGCCATACGAACGCTTTGTCAACAACATTGCCAGAGCAAAATATTTAGAAATGTTGAAGAAGGATTTTCTTTTTGAAAGAGGATTTGGAAATGACCTACCACAGTTTTTGCGAGCAAGGATTACTAATCATGAATGAGAGCAGATTTGTGCAAAGCAGGAGCCAGTCAACTCAAATATAGTTCGCGAATTCTACGCGAATATTGACGAAGAAGAGGGCTTCCAGCAATTGTTCGAGGAGTCGCTGTGGATTGGAGCACAGGTGCGATTAATTATTTATTTAACCTCCAAGACCTCCCCCACGCGGGTTACAATGAGATGGTGGCAGCACCATCTAATGATCATCTGAATGCGGCTGCTAGGGAAGTAGGAATAGAAGGGGCCCAATGGAGGTTGTCGAAGACAGAGAAGCGTACTTTTCAGGCCGCTTATTTGAAGAGCGAAGCAAACACCTTGTTGGGCTTCGTTAAATTGCGTCTTTTGCCAACAACCCACGACTCCACCGTCTCCCGTTATCGTGTTCTATTAGTTTTTGCTATCTTGAGGTCACTAAGCATCGATGTCGGCAAAATAATTTCTAGTGAGATTCATACCTGCTGGCGGAAGAAGGTGAGCAAGCACTACAAGAAATAA ATGTTGCAGAGGAAGTGGCTGGGGAAAAGCAACCAGCAGGCCCTGAAGAAGGAAAAAGTTCGGAACAAGGAGATCAACTTGTCAAAACTCAGTAGGAAATACAAGATAAGAGGGCAGAGGATATGCCATAGCAAGGGGATCGTCAAGAAGTTCAAGAATAGAAGGTCCAGGAAGAAGTTGTGCGGGAACCACGACGTCGTCGCCGCTGCAAGAAAAAGGCTGGACGAATTAAGAGGGTTTAGAGTTTATGGTTTAGGGAATCAGAGAAGGAAAACACAGAAAAAGAGGATCAAGAGAAGGAAGAGATTGAAAAGAAAGCTGAAGAAGAAGCCATGGCGAAGCAAGAAGAAGATAGAGGCAAAGGAGTTGCCGAAGCAACAGACGAAGCAGAGAAAGACGAAATTGAGGAACCGAGGTGCGATTAATTATTTATTTAACCTCCAAGACCTCCCCCACGCGGGTTACAATGAGATGGTGGCAGCACCATCTAATGATCATCTGAATGCGGCTGCTAGGGAAGTAGGAATAGAAGGGGCCCAATGGAGGTTGTCGAAGACAGAGAAGCGTACTTTTCAGGCCGCTTATTTGAAGAGCGAAGCAAACACCTTGTTGGGCTTCGTTAAATTGCGTCTTTTGCCAACAACCCACGACTCCACCGTCTCCCGTTATCGTGTTCTATTAGTTTTTGCTATCTTGAGGTCACTAAGCATCGATGTCGGCAAAATAATTTCTAGTGAGATTCATACCTGCTGGCGGAAGAAGGTGAGCAAGCACTACAAGAAATAA ATGTTGCAGAGGAAGTGGCTGGGGAAAAGCAACCAGCAGGCCCTGAAGAAGGAAAAAGTTCGGAACAAGGAGATCAACTTGTCAAAACTCAGTAGGAAATACAAGATAAGAGGGCAGAGGATATGCCATAGCAAGGGGATCGTCAAGAAGTTCAAGAATAGAAGGTCCAGGAAGAAGTTGTGCGGGAACCACGACGTCGTCGCCGCTGCAAGAAAAAGGCTGGACGAATTAAGAGGGTTTAGAGTTTATGGTTTAGGGAATCAGAGAAGGAAAACACAGAAAAAGAGGATCAAGAGAAGGAAGAGATTGAAAAGAAAGCTGAAGAAGAAGCCATGGCGAAGCAAGAAGAAGATAGAGGCAAAGGAGTTGCCGAAGCAACAGACGAAGCAGAGAAAGACGAAATTGAGGAACCGAGGTGCGATTAATTATTTATTTAACCTCCAAGACCTCCCCCACGCGGGTTACAATGAGATGGTGGCAGCACCATCTAATGATCATCTGAATGCGGCTGCTAGGGAAGTAGGAATAGAAGGGGCCCAATGGAGGTTGTCGAAGACAGAGAAGCGTACTTTTCAGGCCGCTTATTTGAAGAGCGAAGCAAACACCTTGTTGGGCTTCGTTAAATTGCGTCTTTTGCCAACAACCCACGACTCCACCGTCTCCCGTTATCGTGTTCTATTAGTTTTTGCTATCTTGAGGTCACTAAGCATCGATGTCGGCAAAATAATTTCTAGTGAGATTCATACCTGCTGGCGGAAGAAGGTGAGCAAGCACTACAAGAAATAA MLQRKWLGKSNQQALKKEKVRNKEINLSKLSRKYKIRGQRICHSKGIVKKFKNRRSRKKLCGNHDVVAAARKRLDELRGFRVYGLGNQRRKTQKKRIKRRKRLKRKLKKKPWRSKKKIEAKELPKQQTKQRKTKLRNRGAINYLFNLQDLPHAGYNEMVAAPSNDHLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKSEANTLLGFVKLRLLPTTHDSTVSRYRVLLVFAILRSLSIDVGKIISSEIHTCWRKKVSKHYKK Homology
BLAST of Lag0028428 vs. NCBI nr
Match: TYH88163.1 (hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]) HSP 1 Score: 80.1 bits (196), Expect = 3.1e-11 Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = 0
BLAST of Lag0028428 vs. NCBI nr
Match: KAB2005540.1 (hypothetical protein ES319_D11G277400v1 [Gossypium barbadense]) HSP 1 Score: 77.4 bits (189), Expect = 2.0e-10 Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 0
BLAST of Lag0028428 vs. NCBI nr
Match: TYG46874.1 (hypothetical protein ES288_D11G292100v1 [Gossypium darwinii]) HSP 1 Score: 76.3 bits (186), Expect = 4.5e-10 Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 0
BLAST of Lag0028428 vs. NCBI nr
Match: TYI22425.1 (hypothetical protein ES332_A06G102500v1 [Gossypium tomentosum]) HSP 1 Score: 73.2 bits (178), Expect = 3.8e-09 Identity = 43/120 (35.83%), Postives = 62/120 (51.67%), Query Frame = 0
BLAST of Lag0028428 vs. NCBI nr
Match: TYG37159.1 (hypothetical protein ES288_D13G120000v1 [Gossypium darwinii]) HSP 1 Score: 72.8 bits (177), Expect = 5.0e-09 Identity = 46/130 (35.38%), Postives = 64/130 (49.23%), Query Frame = 0
BLAST of Lag0028428 vs. ExPASy TrEMBL
Match: A0A5D2MA47 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G168900v1 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.5e-11 Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = 0
BLAST of Lag0028428 vs. ExPASy TrEMBL
Match: A0A5J5PJ67 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D11G277400v1 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 9.8e-11 Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 0
BLAST of Lag0028428 vs. ExPASy TrEMBL
Match: A0A5D2APP6 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D11G292100v1 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10 Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 0
BLAST of Lag0028428 vs. ExPASy TrEMBL
Match: A0A5D2Q4A4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A06G102500v1 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-09 Identity = 43/120 (35.83%), Postives = 62/120 (51.67%), Query Frame = 0
BLAST of Lag0028428 vs. ExPASy TrEMBL
Match: A0A5D1ZYC3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D13G120000v1 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.4e-09 Identity = 46/130 (35.38%), Postives = 64/130 (49.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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