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Lag0028427 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACAAAGTTTACAGCAAGTAGGTAAGGTTAAAATTATGGGTGGGTACTTAACTGGGGACGTGCTAACAAGATGGGGTTTAGATTCCTGAAACAATTTTATAATCAACCTAACTTTTCTGTGTTTGTGTTGCTTAGAAAGAACTGTTCTATTTTCTAGTAGTGTAAACATGTTTACGTAGCTGTGTTTGTTTCCTTATGAAGCAACAAGTTTGTTATGTAAAAAAATAGTTTTGAAGACTATATATCAAATGTTTTTTTTAAATGAATCCTTGGATTTACAATTTGGACAGCCTTGTGGGTCAACCCTTTTCTTTAGTGTGTGACAACCTGTGACTCTTTGTTTGTTTAAATATTGTCAATGGAGCCCAATTGCAATGTTGAATATTTGTACCCTTTACTGTTTTTACCCAACTATGATTCTGAAGTTTAACCAAATGATTTCACATTTGCAGGTACCTTGTGCAACCAAAGCTGCAAGGCCAGAAAGAGTTCCCCTGCTAGAACTCGTAGCTCGAACTTGCCAGCGAACAATACAACCACATTGCTCGATGTTTTATGGTTTTTTCTGAGTTTTTTGCTAACTCAAATTCCAGCGAACAATCAAATTCCATTAATCGTCGGCTAGTCCTCCTTCCAACCATCACGCGAGGTTTTATGGTTTTTCTGAGTTTTTTGCCAACTCCTATTTCGATCCCTATTGCCTTAGTTTTTTGCCTCTCAGTCTTCCTGCAAGTATTTATTTCTAATTTTTATTTTGGAAAAACAGATTATCAAATTTAAGTTGTTTTTTAGTTGAAGCAATTTGATTATAACATAGTGATTTGGTTTCTACGTGAGAGATTATAACATAGTGACATTTTTTTTCGACTTCTTAGTGGAGAATGTTTCAAGATTTGGCTTGTTGCGCACTGTTTATTGATAGCTCTATTGTAATAAACCAAGTACCTTTTTTTTCTTGATTTTATTTGTTTTTGGGGTGGGCTTTGTGAGAGCTTAAAAAATCAAGCATGATAGAATGCTTTATGATGACTCATAGCTATTGTTTTTTATGTTCCACCCTACATACTCTCTTATTCCCTCTAATTAGTTTCAAGCTTTGTGATTTGAGGCTATTTGATTATCACTAAGCTTTTGGAATTGTCTAAGTAACTTTAAAAATTAGCAAGAAATAAAGAATGGAATGGTTGAAGGAAAAAGTCGTGCTTGAAAGAATTGGGTAAGACCCAAGTCTTATTCTAAATGGAAGATAAATACAGTTCAAATATAATCGATATTTTTGGTGTTATTCATCTTGTTTTTAGGCTTCTGGCTTCTTAAGATACTTTGTGAAATACAAGGAGAAAAGAACTTGTGCGTGTGTGTTTACCTGGACAGTCAGGGCTGGAAAATTGTTTCTATTGTGCTTGTGGTACTGAGTGAAGAGTATTCTTTTCTTTAGTTGCGAAGAAAGAGAGGAAATGAACAAAAATATTTTACTTGATGATACGAATGAGATTTAGATGTTAGATTTCACCCATTGGAGCTTGCCTCAATTTCGATTGTTGTACGGTAAACTTCATTCTTCTTCCATTTCTCCCTCTAATTTCCCCCAATCTTAACTTCTAGTGACCTAAAGCTAGTTTTTTTTGGCAATCTGATCTAAAGCAGCATCAGAATTAGGTTTTGGTTGCCATTTTGTTCTAATTTTTGTGTTGAATTGGTGTAATTGCAGGTGGAATTTTGTTTGTGTTTGATTTTGACTTACTCGATTACATTCTAGGGATCATCTACACTCTCTATGCCACCGTCTTCGTCGAGTTTATGCCACTCGTGATCTTGCTGAGGTGAGTGGAACTGAGAAGAGCTTTGAAATGTGATTACTTAAACTAAAGCTCCAATTGTTTATTTTTACTTCAACTTCTTTTTGTGGACATTGAGATTTAAATTGAAAACCAGATGGAAAGGTTACCTTCGGATGAAATAAATAACATCAACTCACAGAAGGAGGCTGGCATTCAGATGATGTTGGCCGCTAAGGCTCATCTTGGCACCAAAAACTGCAATTTTCAAATGGAACGATACGTTTTCAAGCGCCGGAATGATGGTATGTTTTCAATCTACTCGCTTGTAGATCTTCGCAGTTGGTGTTAG ATGTCAACAAAGTTTACAGCAAGTACCTTGTGCAACCAAAGCTGCAAGGCCAGAAAGAGTTCCCCTGCTAGAACTCGTAGCTCGAACTTGCCAGCGAACAATACAACCACATTGCTCGATGTTTTATGGAGAAAAGAACTTGTGCGTGTGTGTTTACCTGGACAGTCAGGGCTGGAAAATTGTTTCTATTGTGCTTGTGGTGGAATTTTGTTTGTGTTTGATTTTGACTTACTCGATTACATTCTAGGGATCATCTACACTCTCTATGCCACCGTCTTCGTCGAGTTTATGCCACTCGTGATCTTGCTGAGGTTACCTTCGGATGAAATAAATAACATCAACTCACAGAAGGAGGCTGGCATTCAGATGATGTTGGCCGCTAAGGCTCATCTTGGCACCAAAAACTGCAATTTTCAAATGGAACGATACGTTTTCAAGCGCCGGAATGATGGTATGTTTTCAATCTACTCGCTTGTAGATCTTCGCAGTTGGTGTTAG ATGTCAACAAAGTTTACAGCAAGTACCTTGTGCAACCAAAGCTGCAAGGCCAGAAAGAGTTCCCCTGCTAGAACTCGTAGCTCGAACTTGCCAGCGAACAATACAACCACATTGCTCGATGTTTTATGGAGAAAAGAACTTGTGCGTGTGTGTTTACCTGGACAGTCAGGGCTGGAAAATTGTTTCTATTGTGCTTGTGGTGGAATTTTGTTTGTGTTTGATTTTGACTTACTCGATTACATTCTAGGGATCATCTACACTCTCTATGCCACCGTCTTCGTCGAGTTTATGCCACTCGTGATCTTGCTGAGGTTACCTTCGGATGAAATAAATAACATCAACTCACAGAAGGAGGCTGGCATTCAGATGATGTTGGCCGCTAAGGCTCATCTTGGCACCAAAAACTGCAATTTTCAAATGGAACGATACGTTTTCAAGCGCCGGAATGATGGTATGTTTTCAATCTACTCGCTTGTAGATCTTCGCAGTTGGTGTTAG MSTKFTASTLCNQSCKARKSSPARTRSSNLPANNTTTLLDVLWRKELVRVCLPGQSGLENCFYCACGGILFVFDFDLLDYILGIIYTLYATVFVEFMPLVILLRLPSDEINNINSQKEAGIQMMLAAKAHLGTKNCNFQMERYVFKRRNDGMFSIYSLVDLRSWC Homology
BLAST of Lag0028427 vs. NCBI nr
Match: XP_011040351.1 (PREDICTED: 40S ribosomal protein SA-like [Populus euphratica]) HSP 1 Score: 76.3 bits (186), Expect = 2.8e-10 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of Lag0028427 vs. NCBI nr
Match: XP_011001299.1 (PREDICTED: 40S ribosomal protein SA-like isoform X1 [Populus euphratica]) HSP 1 Score: 76.3 bits (186), Expect = 2.8e-10 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of Lag0028427 vs. NCBI nr
Match: KAG5234359.1 (40S ribosomal protein [Salix suchowensis] >KAG5234372.1 40S ribosomal protein [Salix suchowensis]) HSP 1 Score: 76.3 bits (186), Expect = 2.8e-10 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of Lag0028427 vs. NCBI nr
Match: XP_022998206.1 (40S ribosomal protein SA-like [Cucurbita maxima]) HSP 1 Score: 76.3 bits (186), Expect = 2.8e-10 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of Lag0028427 vs. NCBI nr
Match: XP_006376986.1 (40S ribosomal protein Sa-2 isoform X1 [Populus trichocarpa] >PNT10683.1 hypothetical protein POPTR_012G117600 [Populus trichocarpa]) HSP 1 Score: 76.3 bits (186), Expect = 2.8e-10 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of Lag0028427 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of Lag0028427 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.9e-12 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of Lag0028427 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.2e-12 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of Lag0028427 vs. ExPASy Swiss-Prot
Match: Q9ZSR8 (40S ribosomal protein SA OS=Brassica napus OX=3708 GN=LRP PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11 Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of Lag0028427 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3) HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11 Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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