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Lag0028422 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCTCATGGGGCAATTTGGGCGGATGTCGTGCGTTTTAGATTTGGTCTTCGAGTTCGTGCGCAGATCTGGGCGGCGCGGGTGTGAGGTTAAGCAACGACGAGCTCAAGCACAAAGGACGAGCTGGAATCGCGCATCAGATCCGATGGTGGCCGACGATTCTTTCTTTCTTCTCCAACGACCAGTTGGCGGCGAGCTCATATCCAACGAAGACCACTATCTCGCGAAGACTCCAGATCTGGAACGTTGTCCCCTTAATTTTTTTTTAAAAAAATAAAAAAGCAGAAAGAAAATAAGGAAGAAGGAAAAAGGAAGGAGAATAAAAGGAGAGGAAGGAAAAAAAAAAAGTTTGCGACCGACTGTCGGTTGCAGGCGGCGCCGGTAGCTAAAGAAGAAGGAGGAGAAGAACATGGAAGAAGAAGAAAAAAAAGAAAAAGAAAAAAAATAATTTTTTATTAATTTAATACTATTTTTATTTTTAAAATAAAAAATAGGTGTGACGTTAGCAATCCATTAGTTTTTAAAGGAAAAATGGATGGAGGGACTAAATTGAAACTAAAACCAAACCTCTCGGGACTAAAAGGAAACCTATTCCAAACCTCAGGGACTAAAAGTGTATTTTTCCCAAAAATTTAACTCTCAACCAAGACTAAAGAATTCAGAGAAACTCTACCAAATGAGAAGGCAGAAGACTCTCTAAAATCCTTTAAGTCCTCGAGTGCTGAATACTTCTTAAAGTCCAAAAACCCTTAAAGATTTCAAGACTTCAAGACTCCAAGGATCAATTGAAGCTTCAAACTAGAGAACAAACATTCTAGCTCTTGAGTGAAACACACACAAGAGAGGTACTACACCCACAAAATTCAATGCAAATACAAAATTTATTCCACGTATCTCATTCCGTTGAAATTACGTGTGAACAAGAATATTATGTGACATGTGAGGATAAAGTTCCTAGTCTTAAATAGTCAGAGAAAACTTAGCTGCACATATCTGGTTTATAATTATTAAATTTAAAATATTAAATTCTCATTTTGCGATGAATAAAAATTCAAAAAATCCAATCTTATGCAAGTTAAGATTTTATCCACAACGAAAATGTGTAATATTCTCTCTAGTCTTTTTCAATAAGAACTAAAGATACCACTTCATTCACGTGGCCAATTGAAGACCATTATAATAAAACTTTATTTTTCTTAATTGGCTATAAATATTGCTTCACACACAAAAGCAAACCATTCCATTCCAACTTTAAGAGATTGACTGCAAGAAAAAAGTGATTCAAAGATGCCCTCAGTATCTGTATGAAACTCCTTTTATTTTTTTTTTTCTATTATTCATTTTTAATTAGTCCTTCCTTTAATTTGTTTTTAATATTTTGTTTTCACATATAAATATAAATCTGGAAATTTTACTTTAAAATATAACTTACAATATCTTTCTAAATATGTCCAAACGCACCTTAGTTTTAAAAGTATTATTACAATACATAATCTTAATTTTTTTTTCAAAAAAAAAAAAAAAAAAAAAATCCCATAAACTTAAAAGGCTAATTAACACTGAATTTTAAAATATAATAAGTTTTACCTAATTTTCAATTTTAACTGACCGAAACCTTGATATAAGTGTGGTGATTAATTTTTACCCTTTATTCAAGTTCCGTTAGATTGAACCACTAATTAAAAAAAAAAATAGTTACAATGTAAAAATGTCCAAAACTCATTAATTTCCGAAACATCAAACCGTATTGAATCCATGCTGCAATCAGGAGCTTTCGTCCAACAAAGGTGCTAGGTCCTGATGGTTTTCCTGCCGTTTTCCATCAGAAGTACTGGGATATTGTGAGTCAATTGACTATTTCTAATTGTTTGGACATCCTAAATTCTGATAGCTCAATTCAGGATTGGAACCATACTAATATTGTGTTAATTCCAAAGTCTCGTCAGGCAAGGTTAGTGTCTGATTACCGCCCTATTAGTCTTTGCAATGTTTCGTATAAGATTGTTACAAAGGTTTTGGCTAATAGGCTTAAGATTATTTTGAATGAGGTTATTGATGAGTGTCAGTCGGCTTTCATTCCTGGTAGATCTATAACTGATAACATGGTTTTGAGTCATGAAATGTTGCATTATCTTCAAAAGTAG ATGAAGCTCATGGGGCAATTTGGGCGGATGTCGTGCGTTTTAGATTTGGTCTTCGAGTTCGTGCGCAGATCTGGGCGGCGCGGGTGTGAGGTTAAGCAACGACGAGCTCAAGCACAAAGGACGAGCTGGAATCGCGCATCAGATCCGATGGTGGCCGACGATTCTTTCTTTCTTCTCCAACGACCAGTTGGCGGCGAGCTCATATCCAACGAAGACCACTATCTCGCGAAGACTCCAGATCTGGAACGTCCTGATGGTTTTCCTGCCGTTTTCCATCAGAAGTACTGGGATATTGTGAGTCAATTGACTATTTCTAATTGTTTGGACATCCTAAATTCTGATAGCTCAATTCAGGATTGGAACCATACTAATATTGTGTTAATTCCAAAGTCTCGTCAGGCAAGGTTAGTGTCTGATTACCGCCCTATTAGTCTTTGCAATGTTTCGTATAAGATTGTTACAAAGGTTTTGGCTAATAGGCTTAAGATTATTTTGAATGAGGTTATTGATGAGTGTCAGTCGGCTTTCATTCCTGGTAGATCTATAACTGATAACATGGTTTTGAGTCATGAAATGTTGCATTATCTTCAAAAGTAG ATGAAGCTCATGGGGCAATTTGGGCGGATGTCGTGCGTTTTAGATTTGGTCTTCGAGTTCGTGCGCAGATCTGGGCGGCGCGGGTGTGAGGTTAAGCAACGACGAGCTCAAGCACAAAGGACGAGCTGGAATCGCGCATCAGATCCGATGGTGGCCGACGATTCTTTCTTTCTTCTCCAACGACCAGTTGGCGGCGAGCTCATATCCAACGAAGACCACTATCTCGCGAAGACTCCAGATCTGGAACGTCCTGATGGTTTTCCTGCCGTTTTCCATCAGAAGTACTGGGATATTGTGAGTCAATTGACTATTTCTAATTGTTTGGACATCCTAAATTCTGATAGCTCAATTCAGGATTGGAACCATACTAATATTGTGTTAATTCCAAAGTCTCGTCAGGCAAGGTTAGTGTCTGATTACCGCCCTATTAGTCTTTGCAATGTTTCGTATAAGATTGTTACAAAGGTTTTGGCTAATAGGCTTAAGATTATTTTGAATGAGGTTATTGATGAGTGTCAGTCGGCTTTCATTCCTGGTAGATCTATAACTGATAACATGGTTTTGAGTCATGAAATGTTGCATTATCTTCAAAAGTAG MKLMGQFGRMSCVLDLVFEFVRRSGRRGCEVKQRRAQAQRTSWNRASDPMVADDSFFLLQRPVGGELISNEDHYLAKTPDLERPDGFPAVFHQKYWDIVSQLTISNCLDILNSDSSIQDWNHTNIVLIPKSRQARLVSDYRPISLCNVSYKIVTKVLANRLKIILNEVIDECQSAFIPGRSITDNMVLSHEMLHYLQK Homology
BLAST of Lag0028422 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 139.8 bits (351), Expect = 2.5e-29 Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 0
BLAST of Lag0028422 vs. NCBI nr
Match: XP_021834215.1 (uncharacterized protein LOC110774005 [Prunus avium]) HSP 1 Score: 139.0 bits (349), Expect = 4.3e-29 Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 0
BLAST of Lag0028422 vs. NCBI nr
Match: XP_021754445.1 (uncharacterized protein LOC110719774 [Chenopodium quinoa]) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-28 Identity = 63/115 (54.78%), Postives = 87/115 (75.65%), Query Frame = 0
BLAST of Lag0028422 vs. NCBI nr
Match: XP_018815621.1 (uncharacterized protein LOC108987197 [Juglans regia] >KAF5442204.1 hypothetical protein F2P56_034891 [Juglans regia]) HSP 1 Score: 134.8 bits (338), Expect = 8.1e-28 Identity = 62/113 (54.87%), Postives = 82/113 (72.57%), Query Frame = 0
BLAST of Lag0028422 vs. NCBI nr
Match: XP_010689378.1 (PREDICTED: uncharacterized protein LOC104903087 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 134.4 bits (337), Expect = 1.1e-27 Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 0
BLAST of Lag0028422 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.9e-12 Identity = 41/122 (33.61%), Postives = 63/122 (51.64%), Query Frame = 0
BLAST of Lag0028422 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.0e-09 Identity = 42/151 (27.81%), Postives = 73/151 (48.34%), Query Frame = 0
BLAST of Lag0028422 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.9e-09 Identity = 44/151 (29.14%), Postives = 72/151 (47.68%), Query Frame = 0
BLAST of Lag0028422 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 3.3e-08 Identity = 37/116 (31.90%), Postives = 59/116 (50.86%), Query Frame = 0
BLAST of Lag0028422 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.2e-29 Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 0
BLAST of Lag0028422 vs. ExPASy TrEMBL
Match: A0A6P5U4U5 (uncharacterized protein LOC110774005 OS=Prunus avium OX=42229 GN=LOC110774005 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.1e-29 Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 0
BLAST of Lag0028422 vs. ExPASy TrEMBL
Match: A0A2I4E895 (uncharacterized protein LOC108987197 OS=Juglans regia OX=51240 GN=LOC108987197 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 3.9e-28 Identity = 62/113 (54.87%), Postives = 82/113 (72.57%), Query Frame = 0
BLAST of Lag0028422 vs. ExPASy TrEMBL
Match: Q2QT44 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g21910 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 5.1e-28 Identity = 62/115 (53.91%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of Lag0028422 vs. ExPASy TrEMBL
Match: A0A2N9GM07 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28341 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 6.7e-28 Identity = 59/115 (51.30%), Postives = 89/115 (77.39%), Query Frame = 0
BLAST of Lag0028422 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06 Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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