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Lag0028420 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGAAATGATGTCGCTGTTAGGAATTTGGAAGTACAGATTGGACAGATCGCTCAAGAAATAAAAAATAGACCACAAGGGACATTGCCCAGCAAGACTGAAAACCCTCACCGAGAAGGTAAAGAGGAGTGCAAGGCTGTCACCTTGAGACGTGGATTAGAATACGATGGACCAGAATACCCCGTGAATCAAGAAGTACGGAAAATCCCAAAAAAAAAACTCTAGAAGAAGTTCCAGAAAAAAAGTCAGAAGTTACCACATAAGTTTTTTAGAATAAAGAAAATAAAGAAAAGACCATGGAATCAAAGGCCTTGGAAGAAAAAGTGAAAGTTCAAGTTCAGAGAAAAAACCGGAAAATGCGACCGCAAAGCCTAAAAAGTTTATTATAGATCCAGATTACAGACCACCACCTCCATATCCTCAGAGATTCAAGTATGCCTCACAAGACACACAGTTAAAAGTTTCTAGATATCCTTAAGCAACTTCATGTCAACATTCCTTGGTGGAAGCGCTTGAACAGATGCCAACTTACGTAAAATTCCTGAAGGACAGTCTGTCCAAGAAAAGAAGATTAGGAGAGTATGAAACAGTTGCACTCACTGAATGCTCTAGTGCACTAGTATAGAACAAGATCCCTCTAAAGCTAAAGGATCTAGGAAGTTTCAATGATCAGCAAGTCGCCTTTAACGTCATGAACGCACTGAAGTATCCAATAGATCTTGAAGAATGTTCAGTGATAGATGAGATTGACGACTTTCTTTATCTGCCTTGCAGGAAATATTAAAAGGGGAGACGCTGGAAGACCTGCTTAAGGAGGAAGAACAAGAGGAAAAAGGTGGGAAAAAGATTGAAGGAGTAGAAGAACCGACCACATATGGTTCTACAGTAGCAAGGATAGAAACGTTGAGAGATTCCTCGGAATCAAACCAGGAAGAAGTTAGGCCGCTGCAGCCATCTATGATCAACCTTTCGGATCTAGAACTCAAACCTCTATCGGAACATCTTAAATATAGTTTCCTTGGAGAAAACAAAACACTACCAGTTCATTTAAGTATAAATAAGCATGATTTGACAAATGTGACTCTCTAAGACTCAACTTACCAACTTTAGTACTTTTTAGGCTTAGGATAAGAAAAATTGATAAAAACAAAACATACAAGTTTTAACAAGAAATAAGATAAGAATGGCAAGAAATGATGTCGCTGTTAGGAATTTGGAAGTACAGATTGGACAGATCGCTCAAGAAATAAAAAATAGACCACAAGGGACATTGCCCAGCAAGACTGAAAACCCTCACCGAGAAGGTAAAGAGGAGTGCAAGGCTGTCACCTTGAGACGTGGATTAGAATACGATGGACCAGAATACCCGTGA ATGGCAAGAAATGATGTCGCTGTTAGGAATTTGGAAGTACAGATTGGACAGATCGCTCAAGAAATAAAAAATAGACCACAAGGGACATTGCCCAGCAAGACTGAAAACCCTCACCGAGAAGGTAAAGAGGAGTGCAAGGCTGTCACCTTGAGACGTGGATTAGAATACGATGGACCAGAATACCCCGTGAATCAAGAAGAAATATTAAAAGGGGAGACGCTGGAAGACCTGCTTAAGGAGGAAGAACAAGAGGAAAAAGGTGGGAAAAAGATTGAAGGAGTAGAAGAACCGACCACATATGGTTCTACAGTAGCAAGGATAGAAACGTTGAGAGATTCCTCGGAATCAAACCAGGAAGAAGTTAGGCCGCTGCAGCCATCTATGATCAACCTTTCGGATCTAGAACTCAAACCTCTATCGGAACATCTTAAATATAGTTTCCTTGGAGAAAACAAAACACTACCAGTTCATTTAAGTATAAATAAGCATGATTTGACAAATATTGGACAGATCGCTCAAGAAATAAAAAATAGACCACAAGGGACATTGCCCAGCAAGACTGAAAACCCTCACCGAGAAGGTAAAGAGGAGTGCAAGGCTGTCACCTTGAGACGTGGATTAGAATACGATGGACCAGAATACCCGTGA ATGGCAAGAAATGATGTCGCTGTTAGGAATTTGGAAGTACAGATTGGACAGATCGCTCAAGAAATAAAAAATAGACCACAAGGGACATTGCCCAGCAAGACTGAAAACCCTCACCGAGAAGGTAAAGAGGAGTGCAAGGCTGTCACCTTGAGACGTGGATTAGAATACGATGGACCAGAATACCCCGTGAATCAAGAAGAAATATTAAAAGGGGAGACGCTGGAAGACCTGCTTAAGGAGGAAGAACAAGAGGAAAAAGGTGGGAAAAAGATTGAAGGAGTAGAAGAACCGACCACATATGGTTCTACAGTAGCAAGGATAGAAACGTTGAGAGATTCCTCGGAATCAAACCAGGAAGAAGTTAGGCCGCTGCAGCCATCTATGATCAACCTTTCGGATCTAGAACTCAAACCTCTATCGGAACATCTTAAATATAGTTTCCTTGGAGAAAACAAAACACTACCAGTTCATTTAAGTATAAATAAGCATGATTTGACAAATATTGGACAGATCGCTCAAGAAATAAAAAATAGACCACAAGGGACATTGCCCAGCAAGACTGAAAACCCTCACCGAGAAGGTAAAGAGGAGTGCAAGGCTGTCACCTTGAGACGTGGATTAGAATACGATGGACCAGAATACCCGTGA MARNDVAVRNLEVQIGQIAQEIKNRPQGTLPSKTENPHREGKEECKAVTLRRGLEYDGPEYPVNQEEILKGETLEDLLKEEEQEEKGGKKIEGVEEPTTYGSTVARIETLRDSSESNQEEVRPLQPSMINLSDLELKPLSEHLKYSFLGENKTLPVHLSINKHDLTNIGQIAQEIKNRPQGTLPSKTENPHREGKEECKAVTLRRGLEYDGPEYP Homology
BLAST of Lag0028420 vs. NCBI nr
Match: XP_030502450.1 (uncharacterized protein LOC115717606 [Cannabis sativa]) HSP 1 Score: 95.1 bits (235), Expect = 7.7e-16 Identity = 72/181 (39.78%), Postives = 99/181 (54.70%), Query Frame = 0
BLAST of Lag0028420 vs. NCBI nr
Match: XP_027178132.1 (uncharacterized protein LOC113777297 [Coffea eugenioides]) HSP 1 Score: 85.5 bits (210), Expect = 6.1e-13 Identity = 65/161 (40.37%), Postives = 85/161 (52.80%), Query Frame = 0
BLAST of Lag0028420 vs. NCBI nr
Match: XP_022157836.1 (uncharacterized protein LOC111024449 [Momordica charantia]) HSP 1 Score: 83.2 bits (204), Expect = 3.0e-12 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of Lag0028420 vs. NCBI nr
Match: XP_022158979.1 (uncharacterized protein LOC111025424 [Momordica charantia]) HSP 1 Score: 82.8 bits (203), Expect = 4.0e-12 Identity = 55/168 (32.74%), Postives = 70/168 (41.67%), Query Frame = 0
BLAST of Lag0028420 vs. NCBI nr
Match: XP_022159235.1 (uncharacterized protein LOC111025653 [Momordica charantia]) HSP 1 Score: 81.6 bits (200), Expect = 8.8e-12 Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of Lag0028420 vs. ExPASy TrEMBL
Match: A0A6J1E110 (uncharacterized protein LOC111025424 OS=Momordica charantia OX=3673 GN=LOC111025424 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.5e-12 Identity = 56/168 (33.33%), Postives = 70/168 (41.67%), Query Frame = 0
BLAST of Lag0028420 vs. ExPASy TrEMBL
Match: A0A6J1DZC3 (uncharacterized protein LOC111024449 OS=Momordica charantia OX=3673 GN=LOC111024449 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.5e-12 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of Lag0028420 vs. ExPASy TrEMBL
Match: A0A6J1DY39 (uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025653 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.3e-12 Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of Lag0028420 vs. ExPASy TrEMBL
Match: A0A6J1DYG0 (uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025764 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11 Identity = 41/75 (54.67%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of Lag0028420 vs. ExPASy TrEMBL
Match: A0A6J1DXH8 (uncharacterized protein LOC111025474 OS=Momordica charantia OX=3673 GN=LOC111025474 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10 Identity = 47/122 (38.52%), Postives = 72/122 (59.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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