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Lag0028409 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATTCTTGAAGTATTCAGAGTCGTCAACGACGGTATGTTTACTGCTCCCCTTTAGATTTAGATCTAATAAATTTTATATGTTTAGCCTTAAGTTTGTATAGAATTTGTTCTATGTTTTGACCAATGCAATAGTTTTTTTGGATAAACAAAATTAACTACGAATCGATCCCAATTACGCTTCCGCTTTAACGAAATTGGGGAATTCCAAATCCTTACAAAACGAATGTACTAAACTTGAGTGTCTCTAGCTATAGTGATTGACAAGGTGAGATTAACCATCCTCCCATTTAATTTCCTGTCATTTACTTTCTCGCAATTTTACTTTCCCCTGCAATTAGTCCCTCTCTCTTCACCCCCCTTCTAAAGAGATTAGAAGTAAACCAGTTGTTCCCTATGATCGACCCCCACCACTACTACTGCAAGTAGTTTAGTAGTTGATGATTATAAATTTATTTGATAGGACCCTCGACAAGTCGTTCTATCAAATTGGCGCTGTTGCCCGGGAACACAGTGCTTTATTTGTAATTGATTTTGTGTTTTTCACCTTTTTCTTTTTTTTTCTTGTGTATTAGTTGTTTTCTTGCAGATCTGGTGACAAATCTTTACAAGAGAAAACACCTCCCTACCAAGAAGCAAGGAAAAGAAATTGAGCTTCATGGTTATCTGGCAGACTCTCGATCTGCTATCCGCTGAGATAGAAAGGGTCGAGCGTGCAGTGCAAGTCTACTTTTCAGCTTCTAAATATCCACCACCTCCCTGCATTATCACGAAGAAGGTAATTCTTTGCCCCTATATGAATTTATTTTCTTAGTTCCTTTTTTGGTGAACTAGGAGCAGGAGCCTACTTTCATGTATCTGAGTTCTTCTCGAGTTGTTCCGAAAGGAAACCCCCAGAGATGTGTGGAGATCAATTCAAATTGAGGGTGTTCCCATATTCACTGCAAGGAGAAGCTAGGAAGTGGATTTTCTCATTGCCTTCAAGATTGGTGTCTTCTTGGAGCGAGATGAGAAGTATTTTCCTGAAGAAGTACCACCCTACTGCGCTGTTGATTGAAGCCACCAGAAGAATTGTCAATGTCACGCAAGCGCCTGAGGAGTTCTTCCATGAGTTCATGAACCGCTTCAATCTATACTGCATGGAACATCACACCCCACTTTCGGAGGAGTCTCTGATAGAAAGCTTCTACGAAGGGTTGACACCTGAAGATAGAAGAATGTTTGACTCAGTCATGACAGCCCATGCTATAAAAAAGGGACTTTTTATAGTGTTTTTATAA ATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATTCTTGAAGTATTCAGAGTCGTCAACGACGATCTGGTGACAAATCTTTACAAGAGAAAACACCTCCCTACCAAGAAGCAAGGAAAAGAAATTGAGCTTCATGGAGCAGGAGCCTACTTTCATGTATCTGAGTTCTTCTCGAGTTGTTCCGAAAGGAAACCCCCAGAGATGTGTGGAGATCAATTCAAATTGAGGGTGTTCCCATATTCACTGCAAGGAGAAGCTAGGAAGTGGATTTTCTCATTGCCTTCAAGATTGGTGTCTTCTTGGAGCGAGATGAGAAGTATTTTCCTGAAGAAGTACCACCCTACTGCGCTGTTGATTGAAGCCACCAGAAGAATTGTCAATGTCACGCAAGCGCCTGAGGAGTTCTTCCATGAGTTCATGAACCGCTTCAATCTATACTGCATGGAACATCACACCCCACTTTCGGAGGAGTCTCTGATAGAAAGCTTCTACGAAGGGTTGACACCTGAAGATAGAAGAATGTTTGACTCAGTCATGACAGCCCATGCTATAAAAAAGGGACTTTTTATAGTGTTTTTATAA ATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATTCTTGAAGTATTCAGAGTCGTCAACGACGATCTGGTGACAAATCTTTACAAGAGAAAACACCTCCCTACCAAGAAGCAAGGAAAAGAAATTGAGCTTCATGGAGCAGGAGCCTACTTTCATGTATCTGAGTTCTTCTCGAGTTGTTCCGAAAGGAAACCCCCAGAGATGTGTGGAGATCAATTCAAATTGAGGGTGTTCCCATATTCACTGCAAGGAGAAGCTAGGAAGTGGATTTTCTCATTGCCTTCAAGATTGGTGTCTTCTTGGAGCGAGATGAGAAGTATTTTCCTGAAGAAGTACCACCCTACTGCGCTGTTGATTGAAGCCACCAGAAGAATTGTCAATGTCACGCAAGCGCCTGAGGAGTTCTTCCATGAGTTCATGAACCGCTTCAATCTATACTGCATGGAACATCACACCCCACTTTCGGAGGAGTCTCTGATAGAAAGCTTCTACGAAGGGTTGACACCTGAAGATAGAAGAATGTTTGACTCAGTCATGACAGCCCATGCTATAAAAAAGGGACTTTTTATAGTGTTTTTATAA MVVFFVVAEQSRIILEVFRVVNDDLVTNLYKRKHLPTKKQGKEIELHGAGAYFHVSEFFSSCSERKPPEMCGDQFKLRVFPYSLQGEARKWIFSLPSRLVSSWSEMRSIFLKKYHPTALLIEATRRIVNVTQAPEEFFHEFMNRFNLYCMEHHTPLSEESLIESFYEGLTPEDRRMFDSVMTAHAIKKGLFIVFL Homology
BLAST of Lag0028409 vs. NCBI nr
Match: XP_028098230.1 (uncharacterized protein LOC114297954 [Camellia sinensis]) HSP 1 Score: 112.1 bits (279), Expect = 5.5e-21 Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 0
BLAST of Lag0028409 vs. NCBI nr
Match: XP_038972621.1 (uncharacterized protein LOC120104835 [Phoenix dactylifera]) HSP 1 Score: 111.3 bits (277), Expect = 9.4e-21 Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = 0
BLAST of Lag0028409 vs. NCBI nr
Match: XP_038973755.1 (uncharacterized protein LOC120105408 [Phoenix dactylifera]) HSP 1 Score: 109.8 bits (273), Expect = 2.7e-20 Identity = 53/144 (36.81%), Postives = 78/144 (54.17%), Query Frame = 0
BLAST of Lag0028409 vs. NCBI nr
Match: XP_038978941.1 (uncharacterized protein LOC120109260, partial [Phoenix dactylifera]) HSP 1 Score: 109.4 bits (272), Expect = 3.6e-20 Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = 0
BLAST of Lag0028409 vs. NCBI nr
Match: XP_038975911.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120106880 [Phoenix dactylifera]) HSP 1 Score: 109.0 bits (271), Expect = 4.7e-20 Identity = 53/144 (36.81%), Postives = 78/144 (54.17%), Query Frame = 0
BLAST of Lag0028409 vs. ExPASy TrEMBL
Match: A0A6P6T204 (uncharacterized protein LOC113696855 OS=Coffea arabica OX=13443 GN=LOC113696855 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 6.6e-20 Identity = 51/146 (34.93%), Postives = 84/146 (57.53%), Query Frame = 0
BLAST of Lag0028409 vs. ExPASy TrEMBL
Match: A0A1U8N3Z0 (LOW QUALITY PROTEIN: uncharacterized protein LOC107943328 OS=Gossypium hirsutum OX=3635 GN=LOC107943328 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 6.6e-20 Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 0
BLAST of Lag0028409 vs. ExPASy TrEMBL
Match: A0A6P4PQT0 (uncharacterized protein LOC108475442 OS=Gossypium arboreum OX=29729 GN=LOC108475442 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.1e-19 Identity = 49/129 (37.98%), Postives = 79/129 (61.24%), Query Frame = 0
BLAST of Lag0028409 vs. ExPASy TrEMBL
Match: A0A6P6U8I2 (uncharacterized protein LOC113708257 OS=Coffea arabica OX=13443 GN=LOC113708257 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.1e-19 Identity = 49/135 (36.30%), Postives = 79/135 (58.52%), Query Frame = 0
BLAST of Lag0028409 vs. ExPASy TrEMBL
Match: A0A1U7ZI23 (uncharacterized protein LOC104590827 OS=Nelumbo nucifera OX=4432 GN=LOC104590827 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.5e-19 Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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