Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCACTTGTCCTTCACCTCTTACCTCAGGCAGTGATCAACCCCTGATTCAGGCAGAATTCAGGATGATCACTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCTTTGATTCAGGCAGAATTCAAGATGATCACTCGCCCTTCACATCTTGCCTTAGGCAGTGATCAACCCCTGATTCAGACGGAATTCAGGATGATCACTTGTCTTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAAGCGAAATTCAG GTTGATCACTTGCCCACTTGCACCGCCAACCTTTGAATATGAAGCGAAGCTGAAATTCTCACTGCCAACTTTTGAAGATGAAGCGAAGAAGAAGCTTTCAACCGCCAACCTTTGAAGGTGAAGCGAGGTCGTCAACTGCCACCAATTTGGAAGATGAAGCGATGCCAGCAATGAAGATGAAGCAACGCCGTCAATCGCCGTCAACTTGAAGATGAAGTGACACCGTCAATCGTCGACTTTGGAGATGAAACGACGTCGTCAATCGCCGTCAACTATGAAAATGAAGCGATGTTATCAATCGCCACCAACTTTGAAGATGAAGCGACGCCGTCAATCACCACCAACTTTGAAGAGGAAGCGACGCCGTCAATCACACCCAACTTTGAAGATGAAGCAAAGTTAGAGTGA mRNA sequence
ATGATCACTTGTCCTTCACCTCTTACCTCAGGCAGTGATCAACCCCTGATTCAGGCAGAATTCAGGATGATCACTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCTTTGATTCAGGCAGAATTCAAGATGATCACTCGCCCTTCACATCTTGCCTTAGGCAGTGATCAACCCCTGATTCAGACGGAATTCAGGATGATCACTTGTCTTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAAGCGAAATTCAGCAACGCCGTCAATCGCCGTCAACTTGAAGATGAAGTGACACCGTCAATCGTCGACTTTGGAGATGAAACGACGTCGTCAATCGCCGTCAACTATGAAAATGAAGCGATGTTATCAATCGCCACCAACTTTGAAGATGAAGCGACGCCGTCAATCACCACCAACTTTGAAGAGGAAGCGACGCCGTCAATCACACCCAACTTTGAAGATGAAGCAAAGTTAGAGTGA Coding sequence (CDS)
ATGATCACTTGTCCTTCACCTCTTACCTCAGGCAGTGATCAACCCCTGATTCAGGCAGAATTCAGGATGATCACTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCTTTGATTCAGGCAGAATTCAAGATGATCACTCGCCCTTCACATCTTGCCTTAGGCAGTGATCAACCCCTGATTCAGACGGAATTCAGGATGATCACTTGTCTTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAAGCGAAATTCAGCAACGCCGTCAATCGCCGTCAACTTGAAGATGAAGTGACACCGTCAATCGTCGACTTTGGAGATGAAACGACGTCGTCAATCGCCGTCAACTATGAAAATGAAGCGATGTTATCAATCGCCACCAACTTTGAAGATGAAGCGACGCCGTCAATCACCACCAACTTTGAAGAGGAAGCGACGCCGTCAATCACACCCAACTTTGAAGATGAAGCAAAGTTAGAGTGA Protein sequence
MITCPSPLTSGSDQPLIQAEFRMITRPSHLASGSDQPLIQAEFKMITRPSHLALGSDQPLIQTEFRMITCLSHLASGSDQPLIQAKFSNAVNRRQLEDEVTPSIVDFGDETTSSIAVNYENEAMLSIATNFEDEATPSITTNFEEEATPSITPNFEDEAKLE
Homology
BLAST of Lag0028404 vs. NCBI nr
Match:
CAE1322405.1 (unnamed protein product [Sepia pharaonis])
HSP 1 Score: 55.1 bits (131), Expect = 6.7e-04
Identity = 38/108 (35.19%), Postives = 46/108 (42.59%), Query Frame = 0
Query: 2 ITC---PSPLTSGSDQPLIQAEFRMITRPSHLASGSDQPLIQAEFKMITRPSHLALGSDQ 61 +TC PS L S SD P I P+HL S SD P I PSHL S Sbjct: 107 LTCYPLPSHLPSSSDSPAILFRLTCYPLPTHLLSSSDSPAIFFRLTCYPLPSHLLSSSVS 166 Query: 62 PLIQTEFRMITCLSHLASGSDQPLIQAKFS-NAVNRRQLEDEVTPSIV 106 P I SHL S SD P I + + + + L V+P+IV Sbjct: 167 PAILFRLTCYLLPSHLLSYSDSPAILFRLTCHRLPTHLLSSSVSPAIV 214
The following BLAST results are available for this feature:
Match Name E-value Identity Description
CAE1322405.1 6.7e-04 35.19 unnamed protein product [Sepia pharaonis] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G A T C A C T T G T C C T T C A C C T C T T A C C T C A G G C A G T G A T C A A C C C C T G A T T C A G G C A G A A T T C A G G A T G A T C A C T C G C C C T T C A C A T C T T G C C T C A G G C A G T G A T C A A C C T T T G A T T C A G G C A G A A T T C A A G A T G A T C A C T C G C C C T T C A C A T C T T G C C T T A G G C A G T G A T C A A C C C C T G A T T C A G A C G G A A T T C A G G A T G A T C A C T T G T C T T T C A C A T C T T G C C T C A G G C A G T G A T C A A C C C C T G A T T C A A G C G A A A T T C A G C A A C G C C G T C A A T C G C C G T C A A C T T G A A G A T G A A G T G A C A C C G T C A A T C G T C G A C T T T G G A G A T G A A A C G A C G T C G T C A A T C G C C G T C A A C T A T G A A A A T G A A G C G A T G T T A T C A A T C G C C A C C A A C T T T G A A G A T G A A G C G A C G C C G T C A A T C A C C A C C A A C T T T G A A G A G G A A G C G A C G C C G T C A A T C A C A C C C A A C T T T G A A G A T G A A G C A A A G T T A G A G T G A 50 100 150 200 250 300 350 400 450 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 141..162
Relationships
The following mRNA feature(s) are a part of this gene: