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Lag0028380 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAAGACTAGAGCTAGGAAAGAGAGGGATAGTGAAGAGGAGGAGGTACCGGTCACACCGGAAGTGCAAAAAGGGAAAACTAAGAAAAAAAGAACGCCAGAAGAGAAGGAGGCGAAGCGAAGACGGAGGCAGCAGAGGGCTGCGGAACAAGAAGTCATCCAAGAAACAGAGGCTGTTCAGAATCTTGAGACAGAACCGATAGTTTCTGTTACGGTTCAGGAAGGGAATACTGAGAAGGAACATGAGACAGAGGTCGAAAGACAAGTCGCAGGTATGCCTGAAAAAGAGAAAACACCAGAGCCGGTGCAGGAGGCTCATGTTGAAATCATTATGCCTGAACCGCCCAAGCGTTGTCGCATCAAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCACCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGGCAGAAGAAGAGCGTTTGCGTGTACAGAGAGAAAGCAATGGCAAAGGAATTGCCGAAGCATCGGGAGAAATTGAGGAGCCGAGGGCACCATTCATTCGCTTCGTCAACGATCTTGTCCGAGCAAAATACCAGGAGGTGCTGAAACGGGACTTCTTGTTCGAACATGGATTTGGCAGTGATTTGCCCAGGTTCTTGGAGTCTGGAATAGTGAACCTCGGATGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGAGAATTTTATGCCAATCTTGACGTTAAGAATGATTTTGAGGTTATCGTTCGAGGAGTGCCTGTACAGTGGAGTCCTGAGGCCATTAATGAATTGTTCGATCTCAAACGACGGAAAGGGGTGCCTACACTTATTTCAAAACTGGTGCTCCAAACAACTCATTAA ATGGCTAAGACTAGAGCTAGGAAAGAGAGGGATAGTGAAGAGGAGGAGGTACCGGTCACACCGGAAGTGCAAAAAGGGAAAACTAAGAAAAAAAGAACGCCAGAAGAGAAGGAGGCGAAGCGAAGACGGAGGCAGCAGAGGGCTGCGGAACAAGAAGTCATCCAAGAAACAGAGGCTGTTCAGAATCTTGAGACAGAACCGATAGTTTCTGTTACGGTTCAGGAAGGGAATACTGAGAAGGAACATGAGACAGAGGTCGAAAGACAAGTCGCAGGTATGCCTGAAAAAGAGAAAACACCAGAGCCGGTGCAGGAGGCTCATGTTGAAATCATTATGCCTGAACCGCCCAAGCGTTGTCGCATCAAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCACCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGGCAGAAGAAGAGCGTTTGCGTGTACAGAGAGAAAGCAATGGCAAAGGAATTGCCGAAGCATCGGGAGAAATTGAGGAGCCGAGGGCACCATTCATTCGCTTCGTCAACGATCTTGTCCGAGCAAAATACCAGGAGGTGCTGAAACGGGACTTCTTGTTCGAACATGGATTTGGCAGTGATTTGCCCAGGTTCTTGGAGTCTGGAATAGTGAACCTCGGATGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGAGAATTTTATGCCAATCTTGACGTTAAGAATGATTTTGAGGTTATCGTTCGAGGAGTGCCTGTACAGTGGAGTCCTGAGGCCATTAATGAATTGTTCGATCTCAAACGACGGAAAGGGGTGCCTACACTTATTTCAAAACTGGTGCTCCAAACAACTCATTAA ATGGCTAAGACTAGAGCTAGGAAAGAGAGGGATAGTGAAGAGGAGGAGGTACCGGTCACACCGGAAGTGCAAAAAGGGAAAACTAAGAAAAAAAGAACGCCAGAAGAGAAGGAGGCGAAGCGAAGACGGAGGCAGCAGAGGGCTGCGGAACAAGAAGTCATCCAAGAAACAGAGGCTGTTCAGAATCTTGAGACAGAACCGATAGTTTCTGTTACGGTTCAGGAAGGGAATACTGAGAAGGAACATGAGACAGAGGTCGAAAGACAAGTCGCAGGTATGCCTGAAAAAGAGAAAACACCAGAGCCGGTGCAGGAGGCTCATGTTGAAATCATTATGCCTGAACCGCCCAAGCGTTGTCGCATCAAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCACCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGGCAGAAGAAGAGCGTTTGCGTGTACAGAGAGAAAGCAATGGCAAAGGAATTGCCGAAGCATCGGGAGAAATTGAGGAGCCGAGGGCACCATTCATTCGCTTCGTCAACGATCTTGTCCGAGCAAAATACCAGGAGGTGCTGAAACGGGACTTCTTGTTCGAACATGGATTTGGCAGTGATTTGCCCAGGTTCTTGGAGTCTGGAATAGTGAACCTCGGATGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGAGAATTTTATGCCAATCTTGACGTTAAGAATGATTTTGAGGTTATCGTTCGAGGAGTGCCTGTACAGTGGAGTCCTGAGGCCATTAATGAATTGTTCGATCTCAAACGACGGAAAGGGGTGCCTACACTTATTTCAAAACTGGTGCTCCAAACAACTCATTAA MAKTRARKERDSEEEEVPVTPEVQKGKTKKKRTPEEKEAKRRRRQQRAAEQEVIQETEAVQNLETEPIVSVTVQEGNTEKEHETEVERQVAGMPEKEKTPEPVQEAHVEIIMPEPPKRCRIKRKAGRVRVIRNTPSPPTSDSEEEKREAENKEKEEEARKAEEERLRVQRESNGKGIAEASGEIEEPRAPFIRFVNDLVRAKYQEVLKRDFLFEHGFGSDLPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVRGVPVQWSPEAINELFDLKRRKGVPTLISKLVLQTTH Homology
BLAST of Lag0028380 vs. NCBI nr
Match: KAE8695166.1 (hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]) HSP 1 Score: 70.5 bits (171), Expect = 2.9e-08 Identity = 37/103 (35.92%), Postives = 55/103 (53.40%), Query Frame = 0
BLAST of Lag0028380 vs. NCBI nr
Match: PON42276.1 (hypothetical protein PanWU01x14_283280 [Parasponia andersonii]) HSP 1 Score: 68.2 bits (165), Expect = 1.4e-07 Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 0
BLAST of Lag0028380 vs. NCBI nr
Match: PON85987.1 (hypothetical protein TorRG33x02_181920, partial [Trema orientale]) HSP 1 Score: 67.0 bits (162), Expect = 3.2e-07 Identity = 36/100 (36.00%), Postives = 50/100 (50.00%), Query Frame = 0
BLAST of Lag0028380 vs. ExPASy TrEMBL
Match: A0A6A2ZUE4 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110733pilonHSYRG00282 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.4e-08 Identity = 37/103 (35.92%), Postives = 55/103 (53.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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