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Lag0028374 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTTCTGAGAAGAAGGGTTGGCGGCGGTAGGCTGCTGCAGGCGGTGGTAGTGGCGGCGGCGACGGTGGTGCTGCTGCTGGCGGCGGTGCCGAATGTTTCGGCGACACGGTGGACTGTTGGTGGCAACATGGGGTGGACGACCAATTTTAACTACACTATCTGGGCTCAGGAGAAGCACTTCTATTATGATGACTGGCTCTGTAAGCACTTCTATCTATCTATAGATCTGTAAATGGTGTGTGGAGTTGTAGCTGATTTACAGATCTCATGCAGATTTCTTAGCTCATGATTTGTTTTTGTGGGATTTGAGGGGGGATTTTGGGGCGGTTTTGTTGGATTTGAAACTTGAACTTGAAGTTTTTGGTTAAATTGGACAAATGGGAGTATATACGAGTTGTTTCAAACTGGTTCTTTCCCAACAAAATATAATTTCAAAGGGATTGAGTGTTTAGAAGTTGAAATTTCTTACATCTATGTTTGTGCATGCTCAGAAATGAAAGCTCCTTCTGTTCATTTGAACTTTTGATTTGGAATTTTTTGGGCTTCTACAACGTGGATGGCTTAGAATTGTTTGTGTTTAGAGAGATTTGCTTGGAGATCTCCAAATTTGGTCCAAATTGTAGAGTTTATTAGCAGATGAGCTATCAAAAAGGGACTGTTCACACTGTCGGTAGAGGCATTACCTATCTCATACTTGCAATCTCTTGGTCTCTCCCATTCTGAAGTAATGTCGGCTCCTCCATGTGAAAATGTCTTTACTCAAACGACACACGCTATTAGATAATAGATAACATGAGGTTCCATGAGATGAGTAACTCATACATCTTATAAATTGGGAGGTCTCCACTTATTTTTTCAATGTGAAATCACGCACACACTTACAGCCATTGGTAACAATCTATTGAGTTTGGTGCATAACATAATTGTTCTTGTCGATGGAGAATTCGGGTTGTTTAACGAAATGTTAGAGTAGCTTAATTAGTTGAACTAGTGAGAGCGATATGGCTGAAGTTGGTGTTGTGTGTCAGTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAGTTGCAATTCAGATCACCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCCTATTACTTCATAAGTGGCAAGGGCTTTTGCTTTGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCGCCCCCGCCCTCGACCTCGCCCTTGAATGAGAAGAGCAGTTCTCCAAGATCTAGCCACATTGCCCACACCCCATTCCTTTTCACCGCTGTTTTCGCCATCGCTGCTCTACGGGAAGCTTTGGCCCGGATCTGGTAG ATGGAGGTTCTGAGAAGAAGGGTTGGCGGCGGTAGGCTGCTGCAGGCGGTGGTAGTGGCGGCGGCGACGGTGGTGCTGCTGCTGGCGGCGGTGCCGAATGTTTCGGCGACACGGTGGACTGTTGGTGGCAACATGGGGTGGACGACCAATTTTAACTACACTATCTGGGCTCAGGAGAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAGTTGCAATTCAGATCACCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCCTATTACTTCATAAGTGGCAAGGGCTTTTGCTTTGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCGCCCCCGCCCTCGACCTCGCCCTTGAATGAGAAGAGCAGTTCTCCAAGATCTAGCCACATTGCCCACACCCCATTCCTTTTCACCGCTGTTTTCGCCATCGCTGCTCTACGGGAAGCTTTGGCCCGGATCTGGTAG ATGGAGGTTCTGAGAAGAAGGGTTGGCGGCGGTAGGCTGCTGCAGGCGGTGGTAGTGGCGGCGGCGACGGTGGTGCTGCTGCTGGCGGCGGTGCCGAATGTTTCGGCGACACGGTGGACTGTTGGTGGCAACATGGGGTGGACGACCAATTTTAACTACACTATCTGGGCTCAGGAGAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAGTTGCAATTCAGATCACCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCCTATTACTTCATAAGTGGCAAGGGCTTTTGCTTTGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCGCCCCCGCCCTCGACCTCGCCCTTGAATGAGAAGAGCAGTTCTCCAAGATCTAGCCACATTGCCCACACCCCATTCCTTTTCACCGCTGTTTTCGCCATCGCTGCTCTACGGGAAGCTTTGGCCCGGATCTGGTAG MEVLRRRVGGGRLLQAVVVAAATVVLLLAAVPNVSATRWTVGGNMGWTTNFNYTIWAQEKHFYYDDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCFGGMKLAIHVEHLPPPPSTSPLNEKSSSPRSSHIAHTPFLFTAVFAIAALREALARIW Homology
BLAST of Lag0028374 vs. NCBI nr
Match: XP_038903389.1 (lamin-like protein [Benincasa hispida]) HSP 1 Score: 311.6 bits (797), Expect = 4.5e-81 Identity = 151/183 (82.51%), Postives = 164/183 (89.62%), Query Frame = 0
BLAST of Lag0028374 vs. NCBI nr
Match: XP_004136682.1 (lamin-like protein [Cucumis sativus] >KGN59525.1 hypothetical protein Csa_001319 [Cucumis sativus]) HSP 1 Score: 307.8 bits (787), Expect = 6.4e-80 Identity = 150/183 (81.97%), Postives = 160/183 (87.43%), Query Frame = 0
BLAST of Lag0028374 vs. NCBI nr
Match: XP_008443359.1 (PREDICTED: lamin-like protein [Cucumis melo] >KAA0053799.1 lamin-like protein [Cucumis melo var. makuwa] >TYK25602.1 lamin-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 305.4 bits (781), Expect = 3.2e-79 Identity = 148/183 (80.87%), Postives = 162/183 (88.52%), Query Frame = 0
BLAST of Lag0028374 vs. NCBI nr
Match: XP_023528207.1 (lamin-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297.4 bits (760), Expect = 8.7e-77 Identity = 144/183 (78.69%), Postives = 157/183 (85.79%), Query Frame = 0
BLAST of Lag0028374 vs. NCBI nr
Match: XP_022935116.1 (lamin-like protein [Cucurbita moschata]) HSP 1 Score: 293.9 bits (751), Expect = 9.6e-76 Identity = 145/183 (79.23%), Postives = 157/183 (85.79%), Query Frame = 0
BLAST of Lag0028374 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 7.7e-44 Identity = 85/168 (50.60%), Postives = 118/168 (70.24%), Query Frame = 0
BLAST of Lag0028374 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2) HSP 1 Score: 75.5 bits (184), Expect = 7.1e-13 Identity = 48/122 (39.34%), Postives = 71/122 (58.20%), Query Frame = 0
BLAST of Lag0028374 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.1e-12 Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 0
BLAST of Lag0028374 vs. ExPASy Swiss-Prot
Match: A0A072U307 (Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.1e-11 Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 0
BLAST of Lag0028374 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.1e-11 Identity = 51/143 (35.66%), Postives = 71/143 (49.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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