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Lag0028367 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGGGAAATTCCAAATTCCTCTACTTTTCTGCAAATCACCAAAGCCAAGTCAAATTCCCACCAAATTTAGTTCTTTTAAGCACAAATAAGCATAATTTGACATACATGACTCTCAACTTCCTAATTCATCAACTTAAACACTTTTTGAGCTGGGGAATAGTGAATTTGATCTCCATCTGAGGTGAATACCTTAAAGAGATTTCCAGCCATGCAGAGCCAATGGATGCCTAACCAGTTTGGGAGAAATTTTTATCCTGGTTGGAGGGACCACCTAAACTACTACTTCCATATCAATCAAAGATTTAATATGCAGCATGGGTCGAGTCTAAGTATTTTAGAAATTTTAGTTAAAAATTTAACTGATAACATTCAAGTCTTGTAGGAAGGTCAACTCAATTTCCAAGAGGAGACTCGAGCTGGGATACAGCAACTAGGAACCCAAATTACCCAGTTGACTGACACTGTCAGTAAATTGGAGGCTAAAGGGGACAAGCTACCTGTTCAACCTGGGATCCCAAGGAGAGAAGATGTATGCACAACAATGTTGAGGAGTGGGACAGTCTTGAGTTCTAATCCAAAGATTTCTTCTCCGCCTGCATTTAAGAAGAACAAAGAAGCAAATAAGCCTGAAAACGAGAAAACAGACAATCTCGACTTTCCAAGGAAACGAGGGGTACATTTTGATCCACCCTTAAATTTAAACTCTTTTGTTCCTAAAGCTCCCTTTCCTAGCAGGTTAGCGCTGTAGCCTAAGCCTTCCAAGAAGAGGAGAAGAAGAATATCCTTGATCTGTTCAAGAAGGTGGAGGTCAACATCCCGCTTCTGGACGTCGTGAAGCAAATTCCCAAGGTAGGTAAATTTTTAAGAAAATGGTGCTCCAGGAAAGGTAAGTCAGAGGTATGCGTTTAGATCATGGTATTTATACTTTGCCATGCATTTTAGGGGATATGGAAATTGAGCATGCCATGTTAGATTTAGGATCCGCTATTAATGTCATATCTCATGCACTCGCTTGTGAACTTAATTTTTCCAATATTAAGAAAACAGGTAATTTGATTCAATTACCAGATAGGTCTCGACACTAAGGCAACTTGGGCACCAAGCATATGATGTAACAGCGTCGCGACGCTATTGCTGCTGGAAAATTATAAATATGACATTTGTCAGCCAAGTTTGAGGAGCCAATTTGAGGTTTTTCACCCTATTCTCGATTCAATACTGAAATTGAGGATTTTGGAAGAGTTTTGGGAGCCTTGTTGAAGATTTTGGGAGCTTGGGATCGATGGAGGTTGCCATGGGATTGAGAAGATCGACACTATTATGAGTAATTCTCTTCCATTTTCCTTTGTTTTTAGTTTCTAGAATAGTTGTGATTAGGAATTATTGGATGTGTTCGTGATTATGAGTAGTTAATTCCTAAATTCTATGAGTATGATTTAGTTTGTTGAACCTTTGTTGAATTAATGAATTGATTTGGTTTGATTGTCATTATCGTTCATTTGTGCATTTTGTCCTTAATGCTTTTAAAGATTGGTTTGGGTAACACGAACGAAGGGTGTTGTGTTGTTAACCTTGGGGAGAACCAACGTAAAATGATTTTAGCAACTTCGTCGTGCTGAAATTGCTTTCAATGCAGTGGTTCCATACATGACACAACACTTATTTTCTATTTCCCCTTCTACAACCCCTACTCATTCTCATCTTCATGTTCATGTTCATGTCATCTTCATTCATCTCCAAATTGAACCTCAAACTTAGTAACTTGTATCAATTTTAACCTCAAACTTACGTAAGTTTTGTAATGTAAACCTTCAATTACATTTCTGTTTGAACCATTGTTAAAGCACATAATTGACTATTTCCTTTTGTAAAAAATTTAGGGAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAGGTTTCATTTTGGTCCCTCCATCCATTTTCCATTAACTTTTATCAGTTTGCTGACGTGTGATTTATTTTTTTAATAAAAAAATATTTCATAAAATTTTAAAAATAAAGTAATAATAAAATCATTTAAAATATATAATTTTTTTTTTTAATTTCCATTTCCCTCCCATTTTCCCTCTATTTCTTCTTCTCCTTCCTCAAAATCACCATCACTCTCTTCTTCTTCTCAACCACCATCACCACCACCTCCAAGCTTTTGCCGCCAGTCGTCGGTGGCCGAAGGTCGGGGACATTTTTTTTTCTTCTCTCTTCCTTTCTCTTTTCTTTCCATTTCTTTATATTCTTTTTTTTTTAATAAAAAAGGGAGAGGAACCTTTCCGACGCCGGAGAAGGGAGGAGTTTTCAAACCCACAGCCACTGCTCGACGACAAGTTTTAGATTGGTAAGAATATTGTTCTCTGCCTTGTATGTTTGGCATGAGAGGATATGATGTATTTATATGTAAATGGTGTTTACAGAATCCATGTCAAAAAGGAAATGAGCATAATCGTTGGCTAATTATAAGGCCAAGGATTCTACTGCTTAGTCAATGGAAATTACAGTGGATTTACAATCAAATAAACATGGAAAGTATTTACACTAATTTGGTACCGTATAATTGTGTGATTTATGGGAGATGATGACACCATTCCAGCCTTATGTTCTGTCACTTGAAGATCCATGCCGACGAGGAGACTGACTCTGAAACAGAGACCAAATCGAGACCCACCATCGTGTAAAACCCACCCCCTCCCGTTTGCTGTTTTCTTCTTATCGCAGACCCACCGTCCCCTCCCGCCGGCAACAAACTCTCGAGGAACCCACGCCGCTGTCACCTCTCCATCTCTATCCCTCGATTATCCTTGTTCAGCTGCGAAACCCACGGGGAAGTGGGGAGGGAAACGCTGA ATGCGGGGAAATTCCAAATTCCTCTACTTTTCTGCAAATCACCAAAGCCAAGAAGGTCAACTCAATTTCCAAGAGGAGACTCGAGCTGGGATACAGCAACTAGGAACCCAAATTACCCAGTTGACTGACACTGTCAGTAAATTGGAGGCTAAAGGGGACAAGCTACCTGTTCAACCTGGGATCCCAAGGAGAGAAGATGTATGCACAACAATGTTGAGGAGTGGGACAGTCTTGAGTTCTAATCCAAAGATTTCTTCTCCGCCTGCATTTAAGAAGAACAAAGAAGCAAATAAGCCTGAAAACGAGAAAACAGACAATCTCGACTTTCCAAGGAAACGAGGGGTACATTTTGATCCACCCTTAAATTTAAACTCTTTTGTTCCTAAAGCTCCCTTTCCTAGCAGATCCATGCCGACGAGGAGACTGACTCTGAAACAGAGACCAAATCGAGACCCACCATCGTGTAAAACCCACCCCCTCCCGTTTGCTGTTTTCTTCTTATCGCAGACCCACCGTCCCCTCCCGCCGGCAACAAACTCTCGAGGAACCCACGCCGCTGTCACCTCTCCATCTCTATCCCTCGATTATCCTTGTTCAGCTGCGAAACCCACGGGGAAGTGGGGAGGGAAACGCTGA ATGCGGGGAAATTCCAAATTCCTCTACTTTTCTGCAAATCACCAAAGCCAAGAAGGTCAACTCAATTTCCAAGAGGAGACTCGAGCTGGGATACAGCAACTAGGAACCCAAATTACCCAGTTGACTGACACTGTCAGTAAATTGGAGGCTAAAGGGGACAAGCTACCTGTTCAACCTGGGATCCCAAGGAGAGAAGATGTATGCACAACAATGTTGAGGAGTGGGACAGTCTTGAGTTCTAATCCAAAGATTTCTTCTCCGCCTGCATTTAAGAAGAACAAAGAAGCAAATAAGCCTGAAAACGAGAAAACAGACAATCTCGACTTTCCAAGGAAACGAGGGGTACATTTTGATCCACCCTTAAATTTAAACTCTTTTGTTCCTAAAGCTCCCTTTCCTAGCAGATCCATGCCGACGAGGAGACTGACTCTGAAACAGAGACCAAATCGAGACCCACCATCGTGTAAAACCCACCCCCTCCCGTTTGCTGTTTTCTTCTTATCGCAGACCCACCGTCCCCTCCCGCCGGCAACAAACTCTCGAGGAACCCACGCCGCTGTCACCTCTCCATCTCTATCCCTCGATTATCCTTGTTCAGCTGCGAAACCCACGGGGAAGTGGGGAGGGAAACGCTGA MRGNSKFLYFSANHQSQEGQLNFQEETRAGIQQLGTQITQLTDTVSKLEAKGDKLPVQPGIPRREDVCTTMLRSGTVLSSNPKISSPPAFKKNKEANKPENEKTDNLDFPRKRGVHFDPPLNLNSFVPKAPFPSRSMPTRRLTLKQRPNRDPPSCKTHPLPFAVFFLSQTHRPLPPATNSRGTHAAVTSPSLSLDYPCSAAKPTGKWGGKR Homology
BLAST of Lag0028367 vs. NCBI nr
Match: XP_022156327.1 (uncharacterized protein LOC111023248 [Momordica charantia]) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-07 Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 0
BLAST of Lag0028367 vs. NCBI nr
Match: XP_038877406.1 (uncharacterized protein LOC120069694 [Benincasa hispida]) HSP 1 Score: 64.7 bits (156), Expect = 1.1e-06 Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 0
BLAST of Lag0028367 vs. NCBI nr
Match: XP_031108596.1 (uncharacterized protein LOC116013076 [Ipomoea triloba]) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-06 Identity = 59/152 (38.82%), Postives = 74/152 (48.68%), Query Frame = 0
BLAST of Lag0028367 vs. NCBI nr
Match: XP_031131881.1 (uncharacterized protein LOC116033267 [Ipomoea triloba]) HSP 1 Score: 62.0 bits (149), Expect = 7.1e-06 Identity = 58/152 (38.16%), Postives = 73/152 (48.03%), Query Frame = 0
BLAST of Lag0028367 vs. NCBI nr
Match: XP_031091054.1 (uncharacterized protein LOC115996048 [Ipomoea triloba]) HSP 1 Score: 61.6 bits (148), Expect = 9.3e-06 Identity = 58/152 (38.16%), Postives = 73/152 (48.03%), Query Frame = 0
BLAST of Lag0028367 vs. ExPASy TrEMBL
Match: A0A6J1DRS5 (uncharacterized protein LOC111023248 OS=Momordica charantia OX=3673 GN=LOC111023248 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 6.3e-08 Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 0
BLAST of Lag0028367 vs. ExPASy TrEMBL
Match: A0A6N2NBX1 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS482486 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.5e-06 Identity = 44/123 (35.77%), Postives = 68/123 (55.28%), Query Frame = 0
BLAST of Lag0028367 vs. ExPASy TrEMBL
Match: A0A0J8BAH8 (Retrotrans_gag domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_7g180100 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.9e-05 Identity = 43/117 (36.75%), Postives = 59/117 (50.43%), Query Frame = 0
BLAST of Lag0028367 vs. ExPASy TrEMBL
Match: A0A6P4N313 (uncharacterized protein LOC108462347 OS=Gossypium arboreum OX=29729 GN=LOC108462347 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.2e-04 Identity = 39/116 (33.62%), Postives = 65/116 (56.03%), Query Frame = 0
BLAST of Lag0028367 vs. ExPASy TrEMBL
Match: A0A6P8DJV3 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116205261 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.2e-04 Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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