
Lag0028363 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGACCCTCGTTACGATCTCATAATTCTGGGTGCCACTGGTTTCACAGGCAAGTACGTTGTCCGAGAAGCTTTGAAATTCCTCAACGCTTCTCCTTCTTCTCCTCTCAAATCTCTCGCTCTCGCCGCTCGAAGCCCCACAAAACTGACCGAAACCCTCAAATGGGCAGCCCATCCCCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCCGCCGGTTCCGCTTCTAATCGCCGATGTCGCCGACCCCAAATCCCTCCGCCGCCTCTGCACCCAAACCAAGCTCATTCTCAACTGCGTCGGACCCTTCCGCCGCTACGGGGAGCCCGTGGTTGCGGCGTGCGTGGAGGCAGGGTGCGATTACTTGGACATCTGTGGGGAGCCTGA ATGGAAGACCCTCGTTACGATCTCATAATTCTGGGTGCCACTGGTTTCACAGGCAAGTACGTTGTCCGAGAAGCTTTGAAATTCCTCAACGCTTCTCCTTCTTCTCCTCTCAAATCTCTCGCTCTCGCCGCTCGAAGCCCCACAAAACTGACCGAAACCCTCAAATGGGCAGCCCATCCCCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCCGCCGGTTCCGCTTCTAATCGCCGATGTCGCCGACCCCAAATCCCTCCGCCGCCTCTGCACCCAAACCAAGCTCATTCTCAACTGCGTCGGACCCTTCCGCCGCTACGGGGAGCCCGTGGTTGCGGCGTGCGTGGAGGCAGGGTGCGATTACTTGGACATCTGTGGGGAGCCTGA ATGGAAGACCCTCGTTACGATCTCATAATTCTGGGTGCCACTGGTTTCACAGGCAAGTACGTTGTCCGAGAAGCTTTGAAATTCCTCAACGCTTCTCCTTCTTCTCCTCTCAAATCTCTCGCTCTCGCCGCTCGAAGCCCCACAAAACTGACCGAAACCCTCAAATGGGCAGCCCATCCCCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCCGCCGGTTCCGCTTCTAATCGCCGATGTCGCCGACCCCAAATCCCTCCGCCGCCTCTGCACCCAAACCAAGCTCATTCTCAACTGCGTCGGACCCTTCCGCCGCTACGGGGAGCCCGTGGTTGCGGCGTGCGTGGAGGCAGGGTGCGATTACTTGGACATCTGTGGGGAGCCTGA MEDPRYDLIILGATGFTGKYVVREALKFLNASPSSPLKSLALAARSPTKLTETLKWAAHPHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAGSASNRRCRRPQIPPPPLHPNQAHSQLRRTLPPLRGARGCGVRGGRVRLLGHLWGA Homology
BLAST of Lag0028363 vs. NCBI nr
Match: XP_023530251.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 107.5 bits (267), Expect = 1.1e-19 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of Lag0028363 vs. NCBI nr
Match: XP_022969671.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Cucurbita maxima]) HSP 1 Score: 107.5 bits (267), Expect = 1.1e-19 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of Lag0028363 vs. NCBI nr
Match: XP_021834420.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Prunus avium]) HSP 1 Score: 105.5 bits (262), Expect = 4.1e-19 Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 0
BLAST of Lag0028363 vs. NCBI nr
Match: XP_022144422.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Momordica charantia]) HSP 1 Score: 104.8 bits (260), Expect = 7.0e-19 Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 0
BLAST of Lag0028363 vs. NCBI nr
Match: XP_007215359.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Prunus persica] >ONI19128.1 hypothetical protein PRUPE_3G260300 [Prunus persica]) HSP 1 Score: 103.2 bits (256), Expect = 2.0e-18 Identity = 51/59 (86.44%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of Lag0028363 vs. ExPASy Swiss-Prot
Match: Q8LGI2 (Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Arabidopsis thaliana OX=3702 GN=At5g39410 PE=1 SV=2) HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18 Identity = 43/60 (71.67%), Postives = 53/60 (88.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|