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Lag0028362 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCTGAGTATGATGAGAGGGCGGTTCAAAGCGGTTCGTTGGTAGTTTCGGGATGTGGGTTCGATTCGGTTCCTGCTGAACTGGGCTTGATCTTCAATTCGAGGCAGTGGGTTGGGAAATCGGCGCCGAGCTGTGTAGAGGCGTATGTGAGTGTGGAGTCCAACAAAAAAATGGTTAGCAACTTTGCGACTTTTGAATCGGCGGTTTTGGGTGTCGCTAATGTTAGCCAGTTGCGGCGGTTGAGGCGTTTGAGGCCGAAACCTCGACCCACGGTGAGAAGTTTTCTTCCCACTTATGTAACTTACAACTTTGGACTCTCATATATATATTATTTATCATAACTTCGTAGAATAATACTTAAATTCTTGTTAATATCTTTTATTTTTCCTGATACAATAAAAATATAGATTGACCTCGTATTGGGCGGATGTTGAACCCAAGATATAGAAATATTGATCTATTGATGGAGATTTAATAGATTGATTGGGAATGAGTTTATTAAATTTGGTTTATGAATCCTATGTTTGGATTAGGTTAAATTATATAAATTGCTCATTGGTATAGTTTCAAGCTTTGAAACTTGATGAAGAAAAAAAAAGTTTCAATTATACTCTTAAATTCGGAAAAGTTTCATTTTACCATTGTATTTTGAAATTATTTACCAAACTAATCCGAGATTTTTTTTTGGGGTTAAAGTGCACGTATCTCAAAAATTAGAAAACACAACTCAATTTCAATTATATAAAAAATTAAAATCGTTGTTAAAAAAATATCTCAAAAATTAGAAAGCATGTGCACATCATTCATTTCAATTAAAAAAAATATATCATTGGCATCATTTACAACCAACTATATTCACGAAACCAATTCTTTCACCTTAGTTGTCACGTCAATTTACATGAATAATGTTGTGTATGATGTCATGCATGCATTTCTATTTTCATACATCAAACTTTTCTGTCAAATTTTATTCATCATCGTAATGGAAGAATTTATAAGATTTTTTTTTTTTTTTTTTTTTTGTGAAGTCTAGGGTATTTAGTATGTGTTTTTGAATTTTCCATTTGATAAGTTTGAATTTTCTGATTTTACAAATGGTGAGTAGGTTTGAAATTTGTAATTAATAATAAAAAAAATCAAATTTTACCATACCTTTTAAATTCATCCATTGCATTCTCATATAATATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCAGCCGAAGCATCAACCATACCTTGGGTTGCACCGTTTAACCCATTGTAAAATGTTTCCATTTGAATACAATGAGGTAAACCATGGTGGGGACACTTTCGCAAAAGCTCCTTAAACATCTCTCAAGCCTCACTAAAAGTCTCATCTTCAAGTTGCCTAAACCCTACTATTTCACTCCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTAGCATTCCTGTTTGGTGGGAAATATTTACTTAAAAATTTTCAGCTAACTCATTCCATGTCCTAATTGATTCTGGAGCAAAAGAATTTAACCATGCCTTTGCTCCATCTCTAAGAGAATACGGGAACAAAGTTAATCGAAGAGCATCTCTAGGCACTCCTTGAATTACAAAAGAATCACTAACTCCTAGAAAAGACTTAAGATGTAAATGAGGCTCTTCAGATGACAAACCATGTAATTGACCCACGATTTTCAACATCTGAAACATTACCGGTTTCATTTCAAAATTTGCCTCTTGAACTTGAGGACGTGCAATCCTGGATTTAGCTCATCAAACATTGGAAAAGCATACGCACGAATGGCTCTGGCCCTATCATTCGCTACCAAGATAGGGTTCTCAACCTGATTATTTTGCTGCTCATTTTGCTCCAGCGGCTGATTTTATTGCAGCAAACGATTATGCTGGGGTTCACTGGATTTTCAAGACCCTGCGGAAGACGCGACACGTTATCCATTTGATTCTACTGTCTACGCTGCTCTCTCCTTCTTCTCCTGAATGTCCTCTCGATTTCTGGATCAAGCTCGAACCTTACCCCAGGCGGATCGCTCATGCACCAAACTCACGCCTGCAAAAACAAAAGAAACAATCAAAAAGTTCTAGCACCAAACCACTAAAACCCATACACAAAACAGATCAGATAAAAACTTATTCAAGTCCCTGGCAACGGCGCCAAAAACTTGTTGGCTTCCTAGAGTGA ATGGAGGCTGAGTATGATGAGAGGGCGGTTCAAAGCGGTTCGTTGGTAGTTTCGGGATGTGGGTTCGATTCGGTTCCTGCTGAACTGGGCTTGATCTTCAATTCGAGGCAGTGGGTTGGGAAATCGGCGCCGAGCTGTGTAGAGGCGTATGTGAGTGTGGAGTCCAACAAAAAAATGGTTAGCAACTTTGCGACTTTTGAATCGGCGGTTTTGGGTGTCGCTAATGTTAGCCAGTTGCGGCGGTTGAGGCGTTTGAGGCCGAAACCTCGACCCACGGGTTCTCAACCTGATTATTTTGCTGCTCATTTTGCTCCAGCGGCTGATTTTATTGCAGCAAACGATTATGCTGGGGTTCACTGGATTTTCAAGACCCTGCGGAAGACGCGACACGTTATCCATTTGATTCTACTGTCTACGCTGCTCTCTCCTTCTTCTCCTGAATGTCCTCTCGATTTCTGGATCAAGCTCGAACCTTACCCCAGGCGGATCGCTCATGCACCAAACTCACGCCTGCAAAAACAAAAGAAACAATCAAAAAGTTCTAGCACCAAACCACTAAAACCCATACACAAAACAGATCAGATAAAAACTTATTCAAGTCCCTGGCAACGGCGCCAAAAACTTGTTGGCTTCCTAGAGTGA ATGGAGGCTGAGTATGATGAGAGGGCGGTTCAAAGCGGTTCGTTGGTAGTTTCGGGATGTGGGTTCGATTCGGTTCCTGCTGAACTGGGCTTGATCTTCAATTCGAGGCAGTGGGTTGGGAAATCGGCGCCGAGCTGTGTAGAGGCGTATGTGAGTGTGGAGTCCAACAAAAAAATGGTTAGCAACTTTGCGACTTTTGAATCGGCGGTTTTGGGTGTCGCTAATGTTAGCCAGTTGCGGCGGTTGAGGCGTTTGAGGCCGAAACCTCGACCCACGGGTTCTCAACCTGATTATTTTGCTGCTCATTTTGCTCCAGCGGCTGATTTTATTGCAGCAAACGATTATGCTGGGGTTCACTGGATTTTCAAGACCCTGCGGAAGACGCGACACGTTATCCATTTGATTCTACTGTCTACGCTGCTCTCTCCTTCTTCTCCTGAATGTCCTCTCGATTTCTGGATCAAGCTCGAACCTTACCCCAGGCGGATCGCTCATGCACCAAACTCACGCCTGCAAAAACAAAAGAAACAATCAAAAAGTTCTAGCACCAAACCACTAAAACCCATACACAAAACAGATCAGATAAAAACTTATTCAAGTCCCTGGCAACGGCGCCAAAAACTTGTTGGCTTCCTAGAGTGA MEAEYDERAVQSGSLVVSGCGFDSVPAELGLIFNSRQWVGKSAPSCVEAYVSVESNKKMVSNFATFESAVLGVANVSQLRRLRRLRPKPRPTGSQPDYFAAHFAPAADFIAANDYAGVHWIFKTLRKTRHVIHLILLSTLLSPSSPECPLDFWIKLEPYPRRIAHAPNSRLQKQKKQSKSSSTKPLKPIHKTDQIKTYSSPWQRRQKLVGFLE Homology
BLAST of Lag0028362 vs. NCBI nr
Match: XP_038905773.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Benincasa hispida]) HSP 1 Score: 147.9 bits (372), Expect = 9.9e-32 Identity = 94/169 (55.62%), Postives = 107/169 (63.31%), Query Frame = 0
BLAST of Lag0028362 vs. NCBI nr
Match: XP_022144422.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Momordica charantia]) HSP 1 Score: 142.5 bits (358), Expect = 4.2e-30 Identity = 73/99 (73.74%), Postives = 83/99 (83.84%), Query Frame = 0
BLAST of Lag0028362 vs. NCBI nr
Match: KGN59529.1 (hypothetical protein Csa_000749 [Cucumis sativus]) HSP 1 Score: 140.6 bits (353), Expect = 1.6e-29 Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Lag0028362 vs. NCBI nr
Match: XP_004136685.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Cucumis sativus]) HSP 1 Score: 140.6 bits (353), Expect = 1.6e-29 Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Lag0028362 vs. NCBI nr
Match: XP_008443363.1 (PREDICTED: probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Cucumis melo] >KAA0053796.1 putative mitochondrial saccharopine dehydrogenase-like oxidoreductase [Cucumis melo var. makuwa] >TYK25605.1 putative mitochondrial saccharopine dehydrogenase-like oxidoreductase [Cucumis melo var. makuwa]) HSP 1 Score: 139.4 bits (350), Expect = 3.5e-29 Identity = 70/92 (76.09%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of Lag0028362 vs. ExPASy Swiss-Prot
Match: Q8LGI2 (Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Arabidopsis thaliana OX=3702 GN=At5g39410 PE=1 SV=2) HSP 1 Score: 127.1 bits (318), Expect = 2.4e-28 Identity = 59/93 (63.44%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Lag0028362 vs. ExPASy Swiss-Prot
Match: Q8NBX0 (Saccharopine dehydrogenase-like oxidoreductase OS=Homo sapiens OX=9606 GN=SCCPDH PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.9e-07 Identity = 31/93 (33.33%), Postives = 56/93 (60.22%), Query Frame = 0
BLAST of Lag0028362 vs. ExPASy Swiss-Prot
Match: Q5R5C9 (Saccharopine dehydrogenase-like oxidoreductase OS=Pongo abelii OX=9601 GN=SCCPDH PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.9e-07 Identity = 31/93 (33.33%), Postives = 56/93 (60.22%), Query Frame = 0
BLAST of Lag0028362 vs. ExPASy Swiss-Prot
Match: Q8R127 (Saccharopine dehydrogenase-like oxidoreductase OS=Mus musculus OX=10090 GN=Sccpdh PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06 Identity = 29/93 (31.18%), Postives = 55/93 (59.14%), Query Frame = 0
BLAST of Lag0028362 vs. ExPASy Swiss-Prot
Match: Q6AY30 (Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06 Identity = 29/93 (31.18%), Postives = 54/93 (58.06%), Query Frame = 0
BLAST of Lag0028362 vs. ExPASy TrEMBL
Match: A0A6J1CTM9 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Momordica charantia OX=3673 GN=LOC111014111 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 2.0e-30 Identity = 73/99 (73.74%), Postives = 83/99 (83.84%), Query Frame = 0
BLAST of Lag0028362 vs. ExPASy TrEMBL
Match: A0A0A0LF70 (Sacchrp_dh_NADP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824740 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 7.7e-30 Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Lag0028362 vs. ExPASy TrEMBL
Match: A0A5D3DQ44 (Putative mitochondrial saccharopine dehydrogenase-like oxidoreductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007640 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29 Identity = 70/92 (76.09%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of Lag0028362 vs. ExPASy TrEMBL
Match: A0A1S3B8K4 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Cucumis melo OX=3656 GN=LOC103486968 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29 Identity = 70/92 (76.09%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of Lag0028362 vs. ExPASy TrEMBL
Match: A0A6J1CTS6 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Momordica charantia OX=3673 GN=LOC111014212 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.4e-28 Identity = 66/93 (70.97%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Lag0028362 vs. TAIR 10
Match: AT5G39410.1 (Saccharopine dehydrogenase ) HSP 1 Score: 127.1 bits (318), Expect = 1.7e-29 Identity = 59/93 (63.44%), Postives = 77/93 (82.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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