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Lag0028360 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGACAACAACTTCGGAGGAATCTTGCCAGACTACATAAGCAACTTCTCTACAAAGATCGAAAAATTGACAATTGTAAGGAATCACATACGAGGGAAAATTCCCAAGGAGATTGGAAATCTTGTCAACTTGAATTCCTTAGGAATGGAGACAAACCAGTTAACTGGCCCAATACCAAGATCAATAGGTAAATTGCACAAACTTCAATCTCTATTTCTTAATGGAAATAAACTTGCAGGTGCTATCCCACCTTCGGTAGGAAATTTAACCATGTTGATAAGATTAAATCTAAGGTTAAATAATTTCGAGGGAAGCGTACCACCAAGTATTGGACAATGCCAACAATTGCTAGAGATGTCTCTTTCCAACAATTATCTTAATGGCTCCATACCAAAAGAGGGTTTTTGTTACATCCTTGTTTGCTTTTGATTGGTCTGAAAATCATTTGATTGGTTCCATTCCCAAAATGCGAAATCACCTCATCATTCATAAACACACCATCCATATGAATGAATACATCTATTTAGATAAAAGGAATTTTTGTATTCCAATATAGCTGGAATTTTTCTTTCTACTTCATGTCCCACTTGGAATCTTAAATACTCTAACTAGTTAACCCATTTGGTCCAATTTTTCACTCTAGTTAGTTTACAAAAATCATAAAATAGAATTTTTGCTTATATTTCTTTCAAGGTTGTTTTTGTAAATTTACCTTCCTTTGCTATTAAGAAAAGGGGAATGTTGCTTGTGTGTTCTTTTGAAATGGAGGTGAATAAGAAACAAGTATTAAGAAGAAATGGGCCAACCATAAAACTAGTATTGTTATTATATATAACTACAAATTTAATTGTTACCTCAACCTTCTATCCAAAAACTTTATACGTGAACTTTTTGGAATAAAAATTTTGAACTAGTTTACATTTGGAGACAAAGTTAAATCTAACTCTTTGTCTTCTTCCTACATGATTTAACTTTTCACAAACCTTGGAAAGTTGCTTTGAAAGGAGTAAAAATTAAGAATGAATAAAGATTGGATTAAACTTAGAGATAAGTTCTCCACAGAGTATATAAACGAAGTAGCTCAGTTTATGGAAATGGCGAAGCTCCATATTAATGATTTCGGGGAAACAAGGTGTCCATGTAGGAATTGTATGAATTCAATGTGGTAGTCTTTAGATGGATAGAACGACATTTATTCACGTATGGAATATCTCCCTCCTATAGTCAATGGGTATATCATGGAGAACCAACCAACTTATCTAGTTATGAGAGTCGTTCAACTGAGTCGATACACGATGATGGGTTAAATACCACTACTGAGTGTAATGTGATGGAGTGAAGAACACTCGAGCGAAAGCGTTAGCGGATCTAAGGCACTGATTTCCATTAATTTCGATGATTAAAAGCATGCTTAAAACAAGAGAAAAACAGAGCAAGAACAAGAGTACCTTGGAGCTCCGAATTCAAGCATCTCTTTGGTTGTTTCTCCTCACGAACTCAACATGGACGACCACAAGGATCTTCCCCGCTATTCTCCGGCCTTAGAACGGGCTTGTGGGAACCCGAGCATGATGAATTTGTGA ATGAGTGACAACAACTTCGGAGGAATCTTGCCAGACTACATAAGCAACTTCTCTACAAAGATCGAAAAATTGACAATTGTAAGGAATCACATACGAGGGAAAATTCCCAAGGAGATTGGAAATCTTGTCAACTTGAATTCCTTAGGAATGGAGACAAACCAGTTAACTGGCCCAATACCAAGATCAATAGAGCAAGAACAAGAGTACCTTGGAGCTCCGAATTCAAGCATCTCTTTGGTTGTTTCTCCTCACGAACTCAACATGGACGACCACAAGGATCTTCCCCGCTATTCTCCGGCCTTAGAACGGGCTTGTGGGAACCCGAGCATGATGAATTTGTGA ATGAGTGACAACAACTTCGGAGGAATCTTGCCAGACTACATAAGCAACTTCTCTACAAAGATCGAAAAATTGACAATTGTAAGGAATCACATACGAGGGAAAATTCCCAAGGAGATTGGAAATCTTGTCAACTTGAATTCCTTAGGAATGGAGACAAACCAGTTAACTGGCCCAATACCAAGATCAATAGAGCAAGAACAAGAGTACCTTGGAGCTCCGAATTCAAGCATCTCTTTGGTTGTTTCTCCTCACGAACTCAACATGGACGACCACAAGGATCTTCCCCGCTATTCTCCGGCCTTAGAACGGGCTTGTGGGAACCCGAGCATGATGAATTTGTGA MSDNNFGGILPDYISNFSTKIEKLTIVRNHIRGKIPKEIGNLVNLNSLGMETNQLTGPIPRSIEQEQEYLGAPNSSISLVVSPHELNMDDHKDLPRYSPALERACGNPSMMNL Homology
BLAST of Lag0028360 vs. NCBI nr
Match: XP_022156901.1 (probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Momordica charantia]) HSP 1 Score: 108.2 bits (269), Expect = 4.6e-20 Identity = 51/68 (75.00%), Postives = 60/68 (88.24%), Query Frame = 0
BLAST of Lag0028360 vs. NCBI nr
Match: XP_011021261.1 (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]) HSP 1 Score: 95.9 bits (237), Expect = 2.4e-16 Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of Lag0028360 vs. NCBI nr
Match: XP_006383439.2 (probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus trichocarpa] >PNS96437.1 hypothetical protein POPTR_017G115900 [Populus trichocarpa]) HSP 1 Score: 95.5 bits (236), Expect = 3.1e-16 Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of Lag0028360 vs. NCBI nr
Match: TKS00435.1 (hypothetical protein D5086_0000182990 [Populus alba]) HSP 1 Score: 93.6 bits (231), Expect = 1.2e-15 Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Lag0028360 vs. NCBI nr
Match: XP_022938561.1 (probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Cucurbita moschata]) HSP 1 Score: 92.8 bits (229), Expect = 2.0e-15 Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 0
BLAST of Lag0028360 vs. ExPASy Swiss-Prot
Match: Q1MX30 (Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.9e-08 Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Lag0028360 vs. ExPASy Swiss-Prot
Match: Q2R2D5 (Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08 Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Lag0028360 vs. ExPASy Swiss-Prot
Match: C0LGT6 (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana OX=3702 GN=EFR PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.5e-08 Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of Lag0028360 vs. ExPASy Swiss-Prot
Match: Q9SD62 (Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07 Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of Lag0028360 vs. ExPASy Swiss-Prot
Match: O49318 (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana OX=3702 GN=At2g33170 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.6e-07 Identity = 27/63 (42.86%), Postives = 40/63 (63.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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