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Lag0028355 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCAGATGATGATGCATCTTCTTTTGTATGCTTTGTGACATCAGTGTAACCAACAAAGTAGTGCTTAATAATTGTGTTTCTTATCACTTGTTTTCTGCTTATATAGCCGTGAAGTAGATAAGTGAAATAGGCCTTTGTGCTTATCTTAGTGAAAGCTCTCTCATCACGTGTGTGTGTGTGTCATTGTATTTTTTGCTCGCTTAATGCTAGAAAAAACACTTAAGCATACACAAAATAGCCAGAGGAACTATATCTTGTTATGAGATTTGTATTTCTTGTAGGTGGAGGATGCTAGCAAAGCTCTTGATGCCACAAATGGCACAACCCTCGAGAAGAATGGACAAATTTTACGAGTAGCATATGCTAAGAGCATTCTTGGTCCAGGATCAAGAGCGTCTGGATCTTCACAGTCTAGCAGCCTTGCAGCTACTGCAATTGAGGCTGCAACGTTTGCCCAACAGGTATTTTAAAAGCTATTACCCCCCCCCCCAATTCATTTGCAGGAACACATTAATTCTCTGCTTCTTATAGACCTGCTTTTAGGTGTAAGTTCTGTTGGAGTGAACCCTATCTATCTCTTTTTTTTAAAAAAAACCAGGGATTCGTAATTAACACATTCATTTAAGTAGGTATACATTGATGCAAATTTTGCATGATTCAGAACTAAATATTGTTTATATTGGTCATGGTGCCATAAATAAAAAAAAAAGGCATTGCTTTTAATTTAGAACTAATGGGTGATGAGTTGATGATAAGGATGTGGAGCTATGCAAAAGGTATACCTTTTCTTTCTTCTGTTTTAGATGTCTGAAATATTTATTTCTAACAAATTTCTGCTGTAAGAATCCTTCACTATTCTAACATGTATTAGGTAGATATATGATTCATAAGTCTTGTTATCAATGGCATCCAAATTATTGTTTTCTGTACTTCTAAGGGTATTTTGTGCATAATTATTCTTTATTGTGTTTTTTAGTATGATGCTGTTGGATGGGCACCAAAGGAATACAACCCAAACGACAAACAATCCAATGGTGGCCAGGAACAAGGAGGTAATGAGGTGGCAGTTCAAAGTCATGGTTCTGCTCCACAATCCGGCTTTGTGTGGGATGAAGCGTCAGGATACTATTATGATGCTGCTTCTGGGTTCTACTATGACAGAAATACAGGTATGTCTCTGATAGAACCCGAACTATTTTGCAATGTAAAAGCTAACCAAACTACAAGATAAACCAAATATTTCAAGGTACTTGGACCCTCCTCTCTTGAGATATCCCTCTCAAGTCCTAATTCACTCAACCAAAGTAATGTCTGCCTTTCTCCTTTCCCAGTCCCTCTATTTATAATCAAAGACCCTAGCAAACTCCTTAACTAATTGCTAATATCCCTTACTAATCTTCCTAATTCCACCCTAACGACATTCCTTTCTATCTCTTGATGAATATATCCCTCCGTTTCTTTGTGACTAATTGGCTTCTTTTATTTTTAAAGATTTTTGCAATTATTTCCTTGCCTACTAATTTCAATTTTTAATCTTCTTGGCCTTTGGGTGGAAATCTTAACATCCACCTCTACCTATCCTTTTTGTTGGTTGATGGAATTCTTGTTTCCTGTAGAAAAGATGCTAGGATGGTACGACTGCAATTTGTTGGGATTAAGTTCAGTATTGAATACTTGTGTGTTTGGGGACTCGACGAGTGAATTTGGCTAG ATGGAACCAGATGATGATGCATCTTCTTTTGTGGAGGATGCTAGCAAAGCTCTTGATGCCACAAATGGCACAACCCTCGAGAAGAATGGACAAATTTTACGAGTAGCATATGCTAAGAGCATTCTTGGTCCAGGATCAAGAGCGTCTGGATCTTCACAGTCTAGCAGCCTTGCAGCTACTGCAATTGAGGCTGCAACGTTTGCCCAACAGTATGATGCTGTTGGATGGGCACCAAAGGAATACAACCCAAACGACAAACAATCCAATGGTGGCCAGGAACAAGGAGGTAATGAGGTGGCAGTTCAAAGTCATGGTTCTGCTCCACAATCCGGCTTTGTGTGGGATGAAGCGTCAGGATACTATTATGATGCTGCTTCTGGGTTCTACTATGACAGAAATACAGAAAAGATGCTAGGATGGTACGACTGCAATTTGTTGGGATTAAGTTCAGTATTGAATACTTGTGTGTTTGGGGACTCGACGAGTGAATTTGGCTAG ATGGAACCAGATGATGATGCATCTTCTTTTGTGGAGGATGCTAGCAAAGCTCTTGATGCCACAAATGGCACAACCCTCGAGAAGAATGGACAAATTTTACGAGTAGCATATGCTAAGAGCATTCTTGGTCCAGGATCAAGAGCGTCTGGATCTTCACAGTCTAGCAGCCTTGCAGCTACTGCAATTGAGGCTGCAACGTTTGCCCAACAGTATGATGCTGTTGGATGGGCACCAAAGGAATACAACCCAAACGACAAACAATCCAATGGTGGCCAGGAACAAGGAGGTAATGAGGTGGCAGTTCAAAGTCATGGTTCTGCTCCACAATCCGGCTTTGTGTGGGATGAAGCGTCAGGATACTATTATGATGCTGCTTCTGGGTTCTACTATGACAGAAATACAGAAAAGATGCTAGGATGGTACGACTGCAATTTGTTGGGATTAAGTTCAGTATTGAATACTTGTGTGTTTGGGGACTCGACGAGTGAATTTGGCTAG MEPDDDASSFVEDASKALDATNGTTLEKNGQILRVAYAKSILGPGSRASGSSQSSSLAATAIEAATFAQQYDAVGWAPKEYNPNDKQSNGGQEQGGNEVAVQSHGSAPQSGFVWDEASGYYYDAASGFYYDRNTEKMLGWYDCNLLGLSSVLNTCVFGDSTSEFG Homology
BLAST of Lag0028355 vs. NCBI nr
Match: KAA0046226.1 (RNA-binding protein 5-B isoform X2 [Cucumis melo var. makuwa] >TYK18970.1 RNA-binding protein 5-B isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 221.1 bits (562), Expect = 7.1e-54 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lag0028355 vs. NCBI nr
Match: XP_016902976.1 (PREDICTED: SUPPRESSOR OF ABI3-5 [Cucumis melo]) HSP 1 Score: 221.1 bits (562), Expect = 7.1e-54 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lag0028355 vs. NCBI nr
Match: XP_011655136.1 (SUPPRESSOR OF ABI3-5 isoform X1 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 1.2e-53 Identity = 113/124 (91.13%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lag0028355 vs. NCBI nr
Match: XP_031741241.1 (SUPPRESSOR OF ABI3-5 isoform X2 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 1.2e-53 Identity = 113/124 (91.13%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lag0028355 vs. NCBI nr
Match: XP_031741242.1 (SUPPRESSOR OF ABI3-5 isoform X3 [Cucumis sativus] >KAE8648342.1 hypothetical protein Csa_023131 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 1.2e-53 Identity = 113/124 (91.13%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lag0028355 vs. ExPASy Swiss-Prot
Match: F4JCU0 (SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana OX=3702 GN=SUA PE=1 SV=2) HSP 1 Score: 167.5 bits (423), Expect = 1.2e-40 Identity = 89/134 (66.42%), Postives = 105/134 (78.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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