
Lag0028349 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAGTTCGATGGAAGTTCAGAGTTCGTAAGAGTCGATAATAGTGAAACTAACAACCCAAGCTACTGTCAATGTGGGTTACGAGCTCGATTAATAACTTCATGGACAAAGAGGAACCCTGGAAGAAGATTCTATGGATGTCCTAGTTACAAGGTATGTAAACTAAGAACCCTAGTTACTGTCACTAGTTTATTAATTTTTCTAATGGTTGCAATTTATTTTAGATACTCGACTGCTCGTCTTCTCTGTTGTGTAGAGGAATGGTTCGGGATGTGGGTTTTTTGATTGGTGTGATCCAGAAGTATTCGAACACAACAAAGAATTGA ATGGACAAGTTCGATGGAAGTTCAGAGTTCGTAAGAGTCGATAATAGTGAAACTAACAACCCAAGCTACTGTCAATGTGGGTTACGAGCTCGATTAATAACTTCATGGACAAAGAGGAACCCTGGAAGAAGATTCTATGGATGTCCTAGTTACAAGATACTCGACTGCTCGTCTTCTCTGTTGTGTAGAGGAATGGTTCGGGATGTGGGTTTTTTGATTGGTGTGATCCAGAAGTATTCGAACACAACAAAGAATTGA ATGGACAAGTTCGATGGAAGTTCAGAGTTCGTAAGAGTCGATAATAGTGAAACTAACAACCCAAGCTACTGTCAATGTGGGTTACGAGCTCGATTAATAACTTCATGGACAAAGAGGAACCCTGGAAGAAGATTCTATGGATGTCCTAGTTACAAGATACTCGACTGCTCGTCTTCTCTGTTGTGTAGAGGAATGGTTCGGGATGTGGGTTTTTTGATTGGTGTGATCCAGAAGTATTCGAACACAACAAAGAATTGA MDKFDGSSEFVRVDNSETNNPSYCQCGLRARLITSWTKRNPGRRFYGCPSYKILDCSSSLLCRGMVRDVGFLIGVIQKYSNTTKN Homology
BLAST of Lag0028349 vs. NCBI nr
Match: PWA46535.1 (zinc finger, GRF-type [Artemisia annua]) HSP 1 Score: 64.7 bits (156), Expect = 4.4e-07 Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 0
BLAST of Lag0028349 vs. NCBI nr
Match: PWA57906.1 (zinc finger, GRF-type [Artemisia annua]) HSP 1 Score: 58.5 bits (140), Expect = 3.2e-05 Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 0
BLAST of Lag0028349 vs. NCBI nr
Match: PIN21218.1 (DNA topoisomerase [Handroanthus impetiginosus]) HSP 1 Score: 57.8 bits (138), Expect = 5.4e-05 Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 0
BLAST of Lag0028349 vs. NCBI nr
Match: KAG6478655.1 (hypothetical protein ZIOFF_062099 [Zingiber officinale]) HSP 1 Score: 57.4 bits (137), Expect = 7.0e-05 Identity = 27/58 (46.55%), Postives = 31/58 (53.45%), Query Frame = 0
BLAST of Lag0028349 vs. NCBI nr
Match: XP_028101709.1 (uncharacterized protein LOC114301019 [Camellia sinensis] >XP_028101710.1 uncharacterized protein LOC114301019 [Camellia sinensis]) HSP 1 Score: 57.0 bits (136), Expect = 9.2e-05 Identity = 22/28 (78.57%), Postives = 23/28 (82.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|