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Lag0028342 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGACATTCGTCTGCACGAAATGTAATAGAAAGAGCGTTTGGTGTTTTGAAGGGTTGGTGGGCTATTCTACGGGGGAAGTCGTATTATCCTGTCAACATACAGGTAAAAACGATAACAGCATGTTGCCTCCTCCACAACCTGATCATTCGTGAAATGGGCCACGACCCGAGTTTCGAGACTACACATCCAGGAGACCAAGATTCAAATGGAATGAATACTGATCACATCACGTTTGTTGAGTCCACATCAACGTGGAGTGAATGGTGGGATTCTATGGCTGAGCAGATGTTCGCGGAATGGAACAACAGTTGA ATGAGACATTCGTCTGCACGAAATGTAATAGAAAGAGCGTTTGGTGTTTTGAAGGGTTGGTGGGCTATTCTACGGGGGAAGTCGTATTATCCTGTCAACATACAGGTAAAAACGATAACAGCATGTTGCCTCCTCCACAACCTGATCATTCGTGAAATGGGCCACGACCCGAGTTTCGAGACTACACATCCAGGAGACCAAGATTCAAATGGAATGAATACTGATCACATCACGTTTGTTGAGTCCACATCAACGTGGAGTGAATGGTGGGATTCTATGGCTGAGCAGATGTTCGCGGAATGGAACAACAGTTGA ATGAGACATTCGTCTGCACGAAATGTAATAGAAAGAGCGTTTGGTGTTTTGAAGGGTTGGTGGGCTATTCTACGGGGGAAGTCGTATTATCCTGTCAACATACAGGTAAAAACGATAACAGCATGTTGCCTCCTCCACAACCTGATCATTCGTGAAATGGGCCACGACCCGAGTTTCGAGACTACACATCCAGGAGACCAAGATTCAAATGGAATGAATACTGATCACATCACGTTTGTTGAGTCCACATCAACGTGGAGTGAATGGTGGGATTCTATGGCTGAGCAGATGTTCGCGGAATGGAACAACAGTTGA MRHSSARNVIERAFGVLKGWWAILRGKSYYPVNIQVKTITACCLLHNLIIREMGHDPSFETTHPGDQDSNGMNTDHITFVESTSTWSEWWDSMAEQMFAEWNNS Homology
BLAST of Lag0028342 vs. NCBI nr
Match: TYK06362.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 151.4 bits (381), Expect = 4.4e-33 Identity = 68/103 (66.02%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of Lag0028342 vs. NCBI nr
Match: KAA0048191.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 150.2 bits (378), Expect = 9.8e-33 Identity = 69/103 (66.99%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of Lag0028342 vs. NCBI nr
Match: TYK08067.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 150.2 bits (378), Expect = 9.8e-33 Identity = 69/103 (66.99%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of Lag0028342 vs. NCBI nr
Match: KAA0049607.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 146.7 bits (369), Expect = 1.1e-31 Identity = 66/103 (64.08%), Postives = 81/103 (78.64%), Query Frame = 0
BLAST of Lag0028342 vs. NCBI nr
Match: KAA0065306.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 137.9 bits (346), Expect = 5.0e-29 Identity = 64/103 (62.14%), Postives = 80/103 (77.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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