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Lag0028337 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATCAATAGCGTGTACCAGATCAAAGCACCCTTGTATCCAAAAGGGAATGATTTGATTAAGAACCCCTCGGCCAAGCAGATGAAAGAAACATTGAAATTAGTGGCCAACCAGGGAGTTCAGTGGATGGAGTCTCAAACAAAAGTGAAGATATTAGTGCCAAGCGATCTCAAGCCAGAATCGACAGTGTGGCTTCACTTTATCAAGAACAGACTGATGCCCACAACCCAAGACAGTACCATTTCAGTAGAGAGGGTTATGATTTTCTATAGCATCATGAAGGGGCTTGAGATAAGCATAGGGAGCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAGAGTGGGGAAGCTGTTGTTTGGATCACTGATTACCCAGTTGTGTTAGAGGGTAAAGATAGTTCTTAGGAAAGATGATGAACGTCACTTTTTCAAGCCAACCATTGACATACCTCTGATTGGGAAGCTTCAATAGAACAATGCCCAAAGAAAGGACAAGGCTTCCACTTCTCAAGCTACTCCACCACCGAGGTTGACACCAGCTTCACCTCCTGAGCATACTCCTGTTTCAGGGCCTACATCATCATCAGAGGCCCTTGCATTCGCCTTCCGACAGCTAGGCCGGATCGAAGACAAGTTGAAGGCTTACTGGGTCTATGCTAAGGAGAGAGATGAAACCATTAGAGAGTTCTACCTCTCTATTGCCCCAAACATCGCCCCGTGTTCCCTGACTTCCCCGGTCGCTGCTGCCTCAAGAAGAGAAACAATCTGA ATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATCAATAGCGTGTACCAGATCAAAGCACCCTTGTATCCAAAAGGGAATGATTTGATTAAGAACCCCTCGGCCAAGCAGATGAAAGAAACATTGAAATTAGTGGCCAACCAGGGAGTTCAGTGGATGGAGTCTCAAACAAAAGTGAAGATATTAGTGCCAAGCGATCTCAAGCCAGAATCGACAGTGTGGCTTCACTTTATCAAGAACAGACTGATGCCCACAACCCAAGACAGTACCATTTCAGTAGAGAGGGTTATGATTTTCTATAGCATCATGAAGGGGCTTGAGATAAGCATAGGGAGCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAGAAACAATGCCCAAAGAAAGGACAAGGCTTCCACTTCTCAAGCTACTCCACCACCGAGGTTGACACCAGCTTCACCTCCTGAGCATACTCCTGTTTCAGGGCCTACATCATCATCAGAGGCCCTTGCATTCGCCTTCCGACAGCTAGGCCGGATCGAAGACAAGTTGAAGGCTTACTGGGTCTATGCTAAGGAGAGAGATGAAACCATTAGAGAGTTCTACCTCTCTATTGCCCCAAACATCGCCCCGTGTTCCCTGACTTCCCCGGTCGCTGCTGCCTCAAGAAGAGAAACAATCTGA ATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATCAATAGCGTGTACCAGATCAAAGCACCCTTGTATCCAAAAGGGAATGATTTGATTAAGAACCCCTCGGCCAAGCAGATGAAAGAAACATTGAAATTAGTGGCCAACCAGGGAGTTCAGTGGATGGAGTCTCAAACAAAAGTGAAGATATTAGTGCCAAGCGATCTCAAGCCAGAATCGACAGTGTGGCTTCACTTTATCAAGAACAGACTGATGCCCACAACCCAAGACAGTACCATTTCAGTAGAGAGGGTTATGATTTTCTATAGCATCATGAAGGGGCTTGAGATAAGCATAGGGAGCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAGAAACAATGCCCAAAGAAAGGACAAGGCTTCCACTTCTCAAGCTACTCCACCACCGAGGTTGACACCAGCTTCACCTCCTGAGCATACTCCTGTTTCAGGGCCTACATCATCATCAGAGGCCCTTGCATTCGCCTTCCGACAGCTAGGCCGGATCGAAGACAAGTTGAAGGCTTACTGGGTCTATGCTAAGGAGAGAGATGAAACCATTAGAGAGTTCTACCTCTCTATTGCCCCAAACATCGCCCCGTGTTCCCTGACTTCCCCGGTCGCTGCTGCCTCAAGAAGAGAAACAATCTGA MSMAVVRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIFYSIMKGLEISIGSIIREEILSCGRKRNNAQRKDKASTSQATPPPRLTPASPPEHTPVSGPTSSSEALAFAFRQLGRIEDKLKAYWVYAKERDETIREFYLSIAPNIAPCSLTSPVAAASRRETI Homology
BLAST of Lag0028337 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 89.0 bits (219), Expect = 5.9e-14 Identity = 42/119 (35.29%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of Lag0028337 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 87.4 bits (215), Expect = 1.7e-13 Identity = 64/234 (27.35%), Postives = 109/234 (46.58%), Query Frame = 0
BLAST of Lag0028337 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida]) HSP 1 Score: 86.3 bits (212), Expect = 3.8e-13 Identity = 49/165 (29.70%), Postives = 88/165 (53.33%), Query Frame = 0
BLAST of Lag0028337 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 84.3 bits (207), Expect = 1.4e-12 Identity = 49/123 (39.84%), Postives = 74/123 (60.16%), Query Frame = 0
BLAST of Lag0028337 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]) HSP 1 Score: 84.0 bits (206), Expect = 1.9e-12 Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = 0
BLAST of Lag0028337 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 8.3e-14 Identity = 64/234 (27.35%), Postives = 109/234 (46.58%), Query Frame = 0
BLAST of Lag0028337 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 7.0e-13 Identity = 49/123 (39.84%), Postives = 74/123 (60.16%), Query Frame = 0
BLAST of Lag0028337 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 9.2e-13 Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = 0
BLAST of Lag0028337 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.0e-12 Identity = 42/129 (32.56%), Postives = 75/129 (58.14%), Query Frame = 0
BLAST of Lag0028337 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 3.5e-12 Identity = 43/129 (33.33%), Postives = 74/129 (57.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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