Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACTCTTCTTCTTCATCCTTTGTTCAAGGACACCGTGTCCCGTACGACTCCCTCACAATCAAGAGGTTTTATAGGCTGCCCGACTTTGAGAGGGATGACTACAGCACCTACCTACATGGCCACCTGGACGTTAATGAGGTCATTCAGACAGTTTGTAGGCCAGGGGCTGAATGGGCTATGACAGGAGCGGAGGTGGTGAGATTCAGGACCACCGATCTGTTTGTAGACTACAGGGCGTGGCACACTTTCCTCTGCGCCAAGTTGATGCCTGTGGCGCATCTAAGCGATGTTACCAAGAGTCGGGCCATCCTTCTTTTCTCTATCGCCACAAGCGCTCAGTAAATGTCGGCCAAGTCATCCATCAGTCCATGCGTCACATCCGCCGTCATAGCACGACAGTAGGGCTCGGGCATCCTTCACTGATCCTTCACTGATCACAACCCTTTTCCGAGCTGCTGGTGTCGTGTGGGACGCCCAGGAGGAGTTGGTCCACCCCGAGGCGATTATCGACAAGAATTTCATCAGTCGCTACCGAGGGCCTGGACCACAGGGTGTGCAGCCAGTTTTCCCCATCCATGCAGAGCCAACGCATCCTGAGCAGCCTGTAGAGCCTGAGCAGCAGGAGCAGGAGGTTCCACCTTCCACCATCGAGGAGCGGCAGCAGCAGCTGCGCATGGAGTTCCAGAGTCACCGACTGAAGTTCCAGACTCTCCAGCAGGGGTTCCAGAGTCATCGGTAG
mRNA sequence
ATGGAAGACTCTTCTTCTTCATCCTTTGTTCAAGGACACCGTGTCCCGTACGACTCCCTCACAATCAAGAGGTTTTATAGGCTGCCCGACTTTGAGAGGGATGACTACAGCACCTACCTACATGGCCACCTGGACGTTAATGAGGTCATTCAGACAGTTTGTAGGCCAGGGGCTGAATGGGCTATGACAGGAGCGGAGGTGGTGAGATTCAGGACCACCGATCTGTTTGTAGACTACAGGGCGTGGCACACTTTCCTCTGCGCCAAGTTGATGCCTGTGGCGCATCTAAGCGATCACGACAGTAGGGCTCGGGCATCCTTCACTGATCCTTCACTGATCACAACCCTTTTCCGAGCTGCTGGTGTCGTGTGGGACGCCCAGGAGGAGTTGGTCCACCCCGAGGCGATTATCGACAAGAATTTCATCAGTCGCTACCGAGGGCCTGGACCACAGGGTGTGCAGCCAGTTTTCCCCATCCATGCAGAGCCAACGCATCCTGAGCAGCCTGTAGAGCCTGAGCAGCAGGAGCAGGAGGTTCCACCTTCCACCATCGAGGAGCGGCAGCAGCAGCTGCGCATGGAGTTCCAGAGTCACCGACTGAAGTTCCAGACTCTCCAGCAGGGGTTCCAGAGTCATCGGTAG
Coding sequence (CDS)
ATGGAAGACTCTTCTTCTTCATCCTTTGTTCAAGGACACCGTGTCCCGTACGACTCCCTCACAATCAAGAGGTTTTATAGGCTGCCCGACTTTGAGAGGGATGACTACAGCACCTACCTACATGGCCACCTGGACGTTAATGAGGTCATTCAGACAGTTTGTAGGCCAGGGGCTGAATGGGCTATGACAGGAGCGGAGGTGGTGAGATTCAGGACCACCGATCTGTTTGTAGACTACAGGGCGTGGCACACTTTCCTCTGCGCCAAGTTGATGCCTGTGGCGCATCTAAGCGATCACGACAGTAGGGCTCGGGCATCCTTCACTGATCCTTCACTGATCACAACCCTTTTCCGAGCTGCTGGTGTCGTGTGGGACGCCCAGGAGGAGTTGGTCCACCCCGAGGCGATTATCGACAAGAATTTCATCAGTCGCTACCGAGGGCCTGGACCACAGGGTGTGCAGCCAGTTTTCCCCATCCATGCAGAGCCAACGCATCCTGAGCAGCCTGTAGAGCCTGAGCAGCAGGAGCAGGAGGTTCCACCTTCCACCATCGAGGAGCGGCAGCAGCAGCTGCGCATGGAGTTCCAGAGTCACCGACTGAAGTTCCAGACTCTCCAGCAGGGGTTCCAGAGTCATCGGTAG
Protein sequence
MEDSSSSSFVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEWAMTGAEVVRFRTTDLFVDYRAWHTFLCAKLMPVAHLSDHDSRARASFTDPSLITTLFRAAGVVWDAQEELVHPEAIIDKNFISRYRGPGPQGVQPVFPIHAEPTHPEQPVEPEQQEQEVPPSTIEERQQQLRMEFQSHRLKFQTLQQGFQSHR
Homology
BLAST of Lag0028333 vs. NCBI nr
Match:
KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])
HSP 1 Score: 140.2 bits (352), Expect = 2.1e-29
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 0
Query: 1 MEDSSSSSFVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEW 60
M + SS SFV+G +V +D TI R+Y LP+FERD+Y+ Y H+DV+++I+ +C+PGAEW
Sbjct: 89 MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEW 148
Query: 61 AMTGAEVVRFRTTDLFVDYRAWHTFLCAKLMPVAHLSD---------------------- 120
+ E +RF++++L V + WH F+CAKL+PVAH S
Sbjct: 149 IINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGK 208
Query: 121 ---------HDSRARASFTDPSLITTLFRAAGVVWDAQEELVHPEAIIDKNFI 143
S SLIT L R GVVW+ +EELV P+ I+DKNFI
Sbjct: 209 VIHKSLCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFI 261
BLAST of Lag0028333 vs. NCBI nr
Match:
XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])
HSP 1 Score: 140.2 bits (352), Expect = 2.1e-29
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 0
Query: 1 MEDSSSSSFVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEW 60
M + SS SFV+G +V +D TI R+Y LP+FERD+Y+ Y H+DV+++I+ +C+PGAEW
Sbjct: 27 MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEW 86
Query: 61 AMTGAEVVRFRTTDLFVDYRAWHTFLCAKLMPVAHLSD---------------------- 120
+ E +RF++++L V + WH F+CAKL+PVAH S
Sbjct: 87 IINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGK 146
Query: 121 ---------HDSRARASFTDPSLITTLFRAAGVVWDAQEELVHPEAIIDKNFI 143
S SLIT L R GVVW+ +EELV P+ I+DKNFI
Sbjct: 147 VIHKSLCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFI 199
BLAST of Lag0028333 vs. NCBI nr
Match:
KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])
HSP 1 Score: 129.8 bits (325), Expect = 2.8e-26
Identity = 82/251 (32.67%), Postives = 124/251 (49.40%), Query Frame = 0
Query: 1 MEDSSSSSFVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEW 60
M + SS SFV+G +V +D TI R+Y LP+FERD+Y Y H+DV+++I+ +C+PGAEW
Sbjct: 89 MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYDIYASEHVDVHQIIRELCQPGAEW 148
Query: 61 AMTGAEVVRFRTTDLFVDYRAWHTFLCAKLMPVAHLSD---------------------- 120
+ E +RF++++L V + WH F+CAKL+PVAH S
Sbjct: 149 VINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGK 208
Query: 121 ---------HDSRARASFTDPSLITTLFRAAGVVWDAQEELVHPEAIIDKNFISRYRGPG 180
S SLIT L R GVVW+ +EELV P+ I+DK+FI G
Sbjct: 209 VIQKSLCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKSFIMEIPG-- 268
Query: 181 PQGVQPVFPIHAEPT-------------HPEQPVEPEQQE------QEVPPSTIEERQQQ 202
+P+ H + T H ++P + ++ E Q + + Q+
Sbjct: 269 -WSFEPMGAGHCDETAGTSHCNKTTDAGHNDEPSDQDEAEPIREVRQTLTIDLPRQTQRP 328
BLAST of Lag0028333 vs. NCBI nr
Match:
EOY19052.1 (Uncharacterized protein TCM_043710 [Theobroma cacao])
HSP 1 Score: 93.2 bits (230), Expect = 2.9e-15
Identity = 47/134 (35.07%), Postives = 74/134 (55.22%), Query Frame = 0
Query: 9 FVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEWAMTGAEVV 68
F Q V + S TI +FY LP+ + D+Y YL ++D++EVI +C G +W M ++
Sbjct: 519 FEQPEVVCFASQTINQFYNLPNIKSDEYGQYLAINVDLHEVIGLLCNEGTKWKMNKGVLL 578
Query: 69 RFRTTDLFVDYRAWHT----FLCAKLMPVAHLSDHDSRARASFTDPSLITTLFRAAGVVW 128
F+ + + DY+ W + +L + A S HD PSLITTL + GV+W
Sbjct: 579 SFKASAMKKDYKLWMSINVRYLVFNSIVQATRSPHD-----GLWYPSLITTLCKKVGVIW 638
Query: 129 DAQEELVHPEAIID 139
D EE++HP+ ++D
Sbjct: 639 DKSEEILHPKVLLD 647
BLAST of Lag0028333 vs. NCBI nr
Match:
PIN01433.1 (hypothetical protein CDL12_26059 [Handroanthus impetiginosus])
HSP 1 Score: 92.8 bits (229), Expect = 3.8e-15
Identity = 58/190 (30.53%), Postives = 83/190 (43.68%), Query Frame = 0
Query: 2 EDSSSSSFVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEWA 61
E + V+G VP+DS+TI Y +P E D + + +D E+ +T+C GA+W
Sbjct: 89 EHKNLKCLVRGREVPFDSVTINELYNIPPIELDAFENFCENGIDYEELTRTLCPHGAQWK 148
Query: 62 MTGAEVVRFRTTDLFVDYRAWHTFLCAKLMPVAH-------------------------- 121
MT E V F++ L + W F+ A+++P H
Sbjct: 149 MTKGEYVSFKSNCLDKAAKIWLWFIFARMLPTRHSGEVTADRALLLYCIMTGKAFDVGKI 208
Query: 122 LSDHDSRARASFTD----PSLITTLFRAAGVVWDAQEELVHPEAIIDKNFISRYRGPGPQ 159
+SD ++ S D PSLIT L AGV WD +EEL+ P ID + R G
Sbjct: 209 ISDSIIQSANSSRDGLWFPSLITKLCTRAGVKWDEKEELIFPRHPIDNTTMLRILNAGHD 268
BLAST of Lag0028333 vs. ExPASy TrEMBL
Match:
A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)
HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 0
Query: 1 MEDSSSSSFVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEW 60
M + SS SFV+G +V +D TI R+Y LP+FERD+Y+ Y H+DV+++I+ +C+PGAEW
Sbjct: 89 MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEW 148
Query: 61 AMTGAEVVRFRTTDLFVDYRAWHTFLCAKLMPVAHLSD---------------------- 120
+ E +RF++++L V + WH F+CAKL+PVAH S
Sbjct: 149 IINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGK 208
Query: 121 ---------HDSRARASFTDPSLITTLFRAAGVVWDAQEELVHPEAIIDKNFI 143
S SLIT L R GVVW+ +EELV P+ I+DKNFI
Sbjct: 209 VIHKSLCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFI 261
BLAST of Lag0028333 vs. ExPASy TrEMBL
Match:
A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1)
HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 0
Query: 1 MEDSSSSSFVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEW 60
M + SS SFV+G +V +D TI R+Y LP+FERD+Y+ Y H+DV+++I+ +C+PGAEW
Sbjct: 27 MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEW 86
Query: 61 AMTGAEVVRFRTTDLFVDYRAWHTFLCAKLMPVAHLSD---------------------- 120
+ E +RF++++L V + WH F+CAKL+PVAH S
Sbjct: 87 IINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGK 146
Query: 121 ---------HDSRARASFTDPSLITTLFRAAGVVWDAQEELVHPEAIIDKNFI 143
S SLIT L R GVVW+ +EELV P+ I+DKNFI
Sbjct: 147 VIHKSLCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFI 199
BLAST of Lag0028333 vs. ExPASy TrEMBL
Match:
A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)
HSP 1 Score: 129.8 bits (325), Expect = 1.4e-26
Identity = 82/251 (32.67%), Postives = 124/251 (49.40%), Query Frame = 0
Query: 1 MEDSSSSSFVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEW 60
M + SS SFV+G +V +D TI R+Y LP+FERD+Y Y H+DV+++I+ +C+PGAEW
Sbjct: 89 MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYDIYASEHVDVHQIIRELCQPGAEW 148
Query: 61 AMTGAEVVRFRTTDLFVDYRAWHTFLCAKLMPVAHLSD---------------------- 120
+ E +RF++++L V + WH F+CAKL+PVAH S
Sbjct: 149 VINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGK 208
Query: 121 ---------HDSRARASFTDPSLITTLFRAAGVVWDAQEELVHPEAIIDKNFISRYRGPG 180
S SLIT L R GVVW+ +EELV P+ I+DK+FI G
Sbjct: 209 VIQKSLCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKSFIMEIPG-- 268
Query: 181 PQGVQPVFPIHAEPT-------------HPEQPVEPEQQE------QEVPPSTIEERQQQ 202
+P+ H + T H ++P + ++ E Q + + Q+
Sbjct: 269 -WSFEPMGAGHCDETAGTSHCNKTTDAGHNDEPSDQDEAEPIREVRQTLTIDLPRQTQRP 328
BLAST of Lag0028333 vs. ExPASy TrEMBL
Match:
A0A0A0KNI1 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 PE=4 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 1.2e-19
Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 0
Query: 1 MEDSSSSSFVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEW 60
M + SS SFV+G +V +D TI R+Y LP+FERD+Y Y H+DV+++I+ +C+PGAEW
Sbjct: 89 MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYDIYASEHVDVHQIIRELCQPGAEW 148
Query: 61 AMTGAEV--VRFRTTDLFVDYRAWHTFLCAKLMPVAHLSDHDSRARASFTDPSLITTLFR 120
+ A V L + K++ + + S SLIT L R
Sbjct: 149 LLPMAHTSSVTKERAILLYAIATKRSVDVGKVIQKSLCNIRKSGMTGGLGHSSLITALCR 208
Query: 121 AAGVVWDAQEELVHPEAIIDKNFISRYRG 148
GVVW+ +EELV P+ I+DK+FI G
Sbjct: 209 NEGVVWNEKEELVDPKPIMDKSFIMEIPG 237
BLAST of Lag0028333 vs. ExPASy TrEMBL
Match:
A0A061FQW0 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_043710 PE=4 SV=1)
HSP 1 Score: 93.2 bits (230), Expect = 1.4e-15
Identity = 47/134 (35.07%), Postives = 74/134 (55.22%), Query Frame = 0
Query: 9 FVQGHRVPYDSLTIKRFYRLPDFERDDYSTYLHGHLDVNEVIQTVCRPGAEWAMTGAEVV 68
F Q V + S TI +FY LP+ + D+Y YL ++D++EVI +C G +W M ++
Sbjct: 519 FEQPEVVCFASQTINQFYNLPNIKSDEYGQYLAINVDLHEVIGLLCNEGTKWKMNKGVLL 578
Query: 69 RFRTTDLFVDYRAWHT----FLCAKLMPVAHLSDHDSRARASFTDPSLITTLFRAAGVVW 128
F+ + + DY+ W + +L + A S HD PSLITTL + GV+W
Sbjct: 579 SFKASAMKKDYKLWMSINVRYLVFNSIVQATRSPHD-----GLWYPSLITTLCKKVGVIW 638
Query: 129 DAQEELVHPEAIID 139
D EE++HP+ ++D
Sbjct: 639 DKSEEILHPKVLLD 647
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0033353.1 | 2.1e-29 | 40.46 | putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]... | [more] |
XP_008458668.1 | 2.1e-29 | 40.46 | PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo] | [more] |
KGN46897.1 | 2.8e-26 | 32.67 | hypothetical protein Csa_020731 [Cucumis sativus] | [more] |
EOY19052.1 | 2.9e-15 | 35.07 | Uncharacterized protein TCM_043710 [Theobroma cacao] | [more] |
PIN01433.1 | 3.8e-15 | 30.53 | hypothetical protein CDL12_26059 [Handroanthus impetiginosus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BBY3 | 1.0e-29 | 40.46 | Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw... | [more] |
A0A1S3C7Y0 | 1.0e-29 | 40.46 | uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=... | [more] |
A0A0A0KER1 | 1.4e-26 | 32.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1 | [more] |
A0A0A0KNI1 | 1.2e-19 | 38.26 | AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 P... | [more] |
A0A061FQW0 | 1.4e-15 | 35.07 | Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_043710 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |