Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGGAACAAGGTGGTTAATTTGTTTCCGCTAGATCTTGAAATTGACAGGACTCTTAGATCCATTCGAAGAGAGAAAAGATTAGCAGAAGTGATGGCCCATCAAGAGGAAGCTCCCAAGGCAATTAGAGATTTCTTACAGCCAGTTCTTCCCACCGAGAATTCTGGAATTGTCTATGCCCCAATCCAAGCTACAAATTTTGAGTTAAAGACAGGATTGATTCAGATGGTGCCCGATAACTCGTTTAAGGGACATCCTTCCGAGGACCCCCATTCACATCTACGATCATTCCTAGAAATTTGTGGGACGGTGAAGATGAACGGAGTTCCGGCAGACGCGATAAGGTTGAGGCTGTTTCCATTTTCTCTATAGGATAAAGCAAAGGATTGGCTCGAATCAGTCGAGACGAGCAACATTAGTACTTGGGACGAGCTTGCCCAAGCTTTTCTGACGAAATTTTTTCCACCTGCCAAGACTACCAAGCTCCAGACTGAAATCGGAACGTTTAGGCAGCTTGACAAGGAGAAGTTGTACGAAGCGAGGGAAAGATACAAAGAAATGGTTAGGCGGTGCCCCCAACACGGATATCCTGATTGGATTCAAGTACAGTTATTTTACAATGGATTGAATCCCTCCACAAAGACGGTCCTAGACACATCAGCAGGAGGAAGTTTTCTTTCAAAAACAGTGACAAAGCCAAAGATCTGCTTGAGGAAATGGCGGCAACCAGTTATCAATGGCCAACCGAGAGGGGAGCAATTACAAAAAGGCTGGATTATATGAATTGGATGAGTCAAGTTCACTGAAGGCACAGCTGGCATCTCTGACCAATGCACTGAACAAGCTGACTTCATCTGAGGTGGTCAAGTCCATTTCCACCTTAGCTGAAGGTCATTCAAAGAAGGAAGGTCAAGATATGGAAGAAGTTCAGTACGTAGGAAATAGACCATATGTTCAAGGAGTACCGAACTTCTACCACCCCAGTCTTCGCAATCACGAGAACTTCTCATACTCAAATACAAAGAATGTTTTGCAGCCACCGCCAGGTTTTGCAGCATCAAGTGTCCCAAAAGAAAAATAACTTGGAGGAGATGGTGGCTTTATTCATCAAAGAACAAAGAATATTGAATGTGAGTCTCCAGACATCAGTAAATAACCACGACGCAGCTCTAAAGAACATGGAAGTGCAAATAGGACAGATTGCTACAGCAGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGTGATACTGAGCCTAACCCGAAAGAGCAGTGCAAGATGGTGACTCTGAGAAGTGGCAGAAGACTAGAGAACGGTTCAAAGAAGAAAAAGGAAGAAGAAAAGAGAAGGGATGAAGATGAAAGGACTAAGGCACAAAAAGCCTCCTCTGAAAGGGTCCAACATCCTCCAACTCTATTGATTTGA
mRNA sequence
ATGCAAAGGAACAAGGTGGTTAATTTGTTTCCGCTAGATCTTGAAATTGACAGGACTCTTAGATCCATTCGAAGAGAGAAAAGATTAGCAGAAGTGATGGCCCATCAAGAGGAAGCTCCCAAGGCAATTAGAGATTTCTTACAGCCAGTTCTTCCCACCGAGAATTCTGGAATTGTCTATGCCCCAATCCAAGCTACAAATTTTGAGTTAAAGACAGGATTGATTCAGATGGTGCCCGATAACTCGTTTAAGGGACATCCTTCCGAGGACCCCCATTCACATCTACGATCATTCCTAGAAATTTGTGGGACGGATAAAGCAAAGGATTGGCTCGAATCAGTCGAGACGAGCAACATTAGTACTTGGGACGAGCTTGCCCAAGCTTTTCTGACGAAATTTTTTCCACCTGCCAAGACTACCAAGCTCCAGACTGAAATCGGAACGTTTAGGCAGCTTGACAAGGAGAAGTTGTACGAAGCGAGGGAAAGATACAAAGAAATGGTTAGGCGGTGCCCCCAACACGGATATCCTGATTGGATTCAATTATCAATGGCCAACCGAGAGGGGAGCAATTACAAAAAGGCTGGATTATATGAATTGGATGAGTCAAGTTCACTGAAGGCACAGCTGGCATCTCTGACCAATGCACTGAACAAGCTGACTTCATCTGAGGTGGTCAAGTCCATTTCCACCTTAGCTGAAGGTCATTCAAAGAAGGAAGGTCAAGATATGGAAGAAGTTCACCACCGCCAGGTTTTGCAGCATCAAGTGTCCCAAAAGAAAAATAACTTGGAGGAGATGGTGGCTTTATTCATCAAAGAACAAAGAATATTGAATGTGAGTCTCCAGACATCAGTAAATAACCACGACGCAGCTCTAAAGAACATGGAAGTGCAAATAGGACAGATTGCTACAGCAGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGTGATACTGAGCCTAACCCGAAAGAGCAGTGCAAGATGGTGACTCTGAGAAGTGGCAGAAGACTAGAGAACGGTTCAAAGAAGAAAAAGGAAGAAGAAAAGAGAAGGGATGAAGATGAAAGGACTAAGGCACAAAAAGCCTCCTCTGAAAGGGTCCAACATCCTCCAACTCTATTGATTTGA
Coding sequence (CDS)
ATGCAAAGGAACAAGGTGGTTAATTTGTTTCCGCTAGATCTTGAAATTGACAGGACTCTTAGATCCATTCGAAGAGAGAAAAGATTAGCAGAAGTGATGGCCCATCAAGAGGAAGCTCCCAAGGCAATTAGAGATTTCTTACAGCCAGTTCTTCCCACCGAGAATTCTGGAATTGTCTATGCCCCAATCCAAGCTACAAATTTTGAGTTAAAGACAGGATTGATTCAGATGGTGCCCGATAACTCGTTTAAGGGACATCCTTCCGAGGACCCCCATTCACATCTACGATCATTCCTAGAAATTTGTGGGACGGATAAAGCAAAGGATTGGCTCGAATCAGTCGAGACGAGCAACATTAGTACTTGGGACGAGCTTGCCCAAGCTTTTCTGACGAAATTTTTTCCACCTGCCAAGACTACCAAGCTCCAGACTGAAATCGGAACGTTTAGGCAGCTTGACAAGGAGAAGTTGTACGAAGCGAGGGAAAGATACAAAGAAATGGTTAGGCGGTGCCCCCAACACGGATATCCTGATTGGATTCAATTATCAATGGCCAACCGAGAGGGGAGCAATTACAAAAAGGCTGGATTATATGAATTGGATGAGTCAAGTTCACTGAAGGCACAGCTGGCATCTCTGACCAATGCACTGAACAAGCTGACTTCATCTGAGGTGGTCAAGTCCATTTCCACCTTAGCTGAAGGTCATTCAAAGAAGGAAGGTCAAGATATGGAAGAAGTTCACCACCGCCAGGTTTTGCAGCATCAAGTGTCCCAAAAGAAAAATAACTTGGAGGAGATGGTGGCTTTATTCATCAAAGAACAAAGAATATTGAATGTGAGTCTCCAGACATCAGTAAATAACCACGACGCAGCTCTAAAGAACATGGAAGTGCAAATAGGACAGATTGCTACAGCAGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGTGATACTGAGCCTAACCCGAAAGAGCAGTGCAAGATGGTGACTCTGAGAAGTGGCAGAAGACTAGAGAACGGTTCAAAGAAGAAAAAGGAAGAAGAAAAGAGAAGGGATGAAGATGAAAGGACTAAGGCACAAAAAGCCTCCTCTGAAAGGGTCCAACATCCTCCAACTCTATTGATTTGA
Protein sequence
MQRNKVVNLFPLDLEIDRTLRSIRREKRLAEVMAHQEEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEICGTDKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKEKLYEARERYKEMVRRCPQHGYPDWIQLSMANREGSNYKKAGLYELDESSSLKAQLASLTNALNKLTSSEVVKSISTLAEGHSKKEGQDMEEVHHRQVLQHQVSQKKNNLEEMVALFIKEQRILNVSLQTSVNNHDAALKNMEVQIGQIATAVNALQKGKFPSDTEPNPKEQCKMVTLRSGRRLENGSKKKKEEEKRRDEDERTKAQKASSERVQHPPTLLI
Homology
BLAST of Lag0028246 vs. NCBI nr
Match:
WP_217833153.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])
HSP 1 Score: 280.0 bits (715), Expect = 3.0e-71
Identity = 185/464 (39.87%), Postives = 247/464 (53.23%), Query Frame = 0
Query: 8 NLFPLDLEIDRTLRSIRREKRLAEVMAHQEEAPKAIRDFLQPVLPTENSGIVYAPIQATN 67
NL PLD EIDRT R R L + EE PKAIRD+ QP LP GI+ PI N
Sbjct: 23 NLLPLDPEIDRTYRRNLR-ALLNQTTEMAEEIPKAIRDYFQPTLPASQPGIMNVPINVNN 82
Query: 68 FELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEICGT---------------------DK 127
FELK GLIQM + +F+G +EDPH HLRSFLEICGT D+
Sbjct: 83 FELKPGLIQMARELAFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDR 142
Query: 128 AKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKEKLYEARERYKE 187
AKDWLE++ +I+TW+ LAQAFL K+FPPAK+ +L+TEIGTFRQL+ E+LYEA ERYK+
Sbjct: 143 AKDWLETIPPDSITTWEILAQAFLNKYFPPAKSQRLRTEIGTFRQLEDEQLYEAWERYKD 202
Query: 188 MVRRCPQHGYPDWIQLSM--------------ANREGSNYKK------------------ 247
++RRCPQHGYPDW+Q+ + A GS + K
Sbjct: 203 LLRRCPQHGYPDWLQIQLFYNGLASSTKSILDATAGGSIFSKNAQEAYTILEDLATTSYN 262
Query: 248 -------------AGLYELDESSSLKAQLASLTNALNKLTSS-------EVVKSISTLAE 307
AGLYE+DE +SLKAQ+ASLTNAL+KLT+ + S++ LA
Sbjct: 263 WPCERASPNIPKAAGLYEVDEVNSLKAQMASLTNALSKLTAGGQAQTNPPSIASLAALAS 322
Query: 308 G---HSKKEGQDMEEVHHRQVLQHQV---------------------------------- 355
H E + + H + QHQ
Sbjct: 323 EMGVHGDNETANYVDRGHYRNYQHQQLPTHYHPNLRNHENFSYANNKNVLQAPQGFNGAG 382
BLAST of Lag0028246 vs. NCBI nr
Match:
KAG7990634.1 (hypothetical protein I3843_02G035100 [Carya illinoinensis])
HSP 1 Score: 250.4 bits (638), Expect = 2.5e-62
Identity = 166/462 (35.93%), Postives = 244/462 (52.81%), Query Frame = 0
Query: 1 MQRNKVVNLFPLDLEIDRTLRSIRREKRLAEVMAHQEEAPKAIRDFLQPVLPTENSGIVY 60
M+R + ++ P+D EI+RTLRS+RR K LA +E P+ ++D+++PV+ S I+
Sbjct: 1 MRRARSRDIIPVDPEIERTLRSLRRNKILAMAEEDREVLPRTLKDYVRPVVNGNYSSIMR 60
Query: 61 APIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEICGT---------------- 120
PI A NFELK LI MV F G P +DP+ HL FLEIC T
Sbjct: 61 QPINANNFELKPALISMVQQAQFSGSPLDDPNIHLAMFLEICDTVKINGVTEDTIRLRLF 120
Query: 121 -----DKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKEKLYE 180
DKA+ WL+S++ +I +W ++A+ FL KFFPPAKT +L++EIG F+Q D E LYE
Sbjct: 121 PFSLRDKARGWLQSLQPGSIVSWQDMAERFLAKFFPPAKTAQLRSEIGQFKQNDFESLYE 180
Query: 181 ARERYKEMVRRCPQHGYPDWIQLSM-----------------------ANREG------- 240
A ERYK+++RRCPQHG PDW+Q+ M EG
Sbjct: 181 AWERYKDLIRRCPQHGLPDWLQVQMFYNGLNGQTRTIVDAASGGTLMSKTAEGATALLEE 240
Query: 241 ---SNY----------KKAGLYELDESSSLKAQLASLTNALNKLTSSEVVKSISTLA--- 300
+NY K AG+++L+ ++L AQ+A+L++ ++ LT+ + +S LA
Sbjct: 241 MASNNYQWPTERTLAKKVAGIHDLEPIAALSAQVATLSHQISALTTQRIPQSTEYLASTS 300
Query: 301 ----EGHSKKE-------------GQDMEEVHH--------------RQVLQ-------- 348
+ +E G M +H + VLQ
Sbjct: 301 MIVPSNEASQEQVQYVNNRNYNYRGNPMPNYYHPGLRNHENLSYGNTKNVLQPQHPPGFD 360
BLAST of Lag0028246 vs. NCBI nr
Match:
XP_022157708.1 (uncharacterized protein LOC111024361 [Momordica charantia])
HSP 1 Score: 230.3 bits (586), Expect = 2.7e-56
Identity = 164/405 (40.49%), Postives = 228/405 (56.30%), Query Frame = 0
Query: 43 IRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEIC 102
IRD+ QP P + GI+ PI A N ELK GLIQMV +N+F+G+ +EDP++HL FL++C
Sbjct: 27 IRDYCQPNFP-NHVGIINLPINANNSELKPGLIQMVRENTFRGNATEDPNNHLTIFLDVC 86
Query: 103 GTDKAKDWLES---VETSNISTWD-ELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKEKLY 162
GT K ++ + +S D E+ QAFLT FFPPAKTT+L+TEI +FR+ D E+L+
Sbjct: 87 GTVKMNGVIDDAIRLRLFPLSLQDKEMVQAFLTNFFPPAKTTQLRTEIRSFRKYDYEQLF 146
Query: 163 EARERYKEMVRRCPQHGYPDWIQLSMANR------------------------------- 222
E ERYKE++R+CPQHG +W+Q+ M
Sbjct: 147 EVWERYKELLRKCPQHGNLEWLQIQMFYNGLNGQTRTILDAAAGGTLLSRTPENAYILLK 206
Query: 223 -----------EGSNYKK-AGLYELDESSSLKAQLASLTNALNKLT------SSEVVKSI 282
E SN KK AG+YE+DE SSLKAQ+ +LTNA++KL+ S+E+V +
Sbjct: 207 DMADNSFQWPSERSNAKKVAGMYEIDELSSLKAQVQALTNAVSKLSGPGTSHSNELVAAT 266
Query: 283 STLAEGHSKKEGQDMEEVHHRQVLQHQVSQKKNNLEEMVALFIKE-----QRILN--VSL 342
T +S E + Q H ++KK++LE+++ FI E RI N +
Sbjct: 267 DT----YSYYE----PTIEQAQFTSHP-AEKKSSLEDLLGAFINECRSRASRIENQVEGM 326
Query: 343 QTSVNNHDAALKNMEVQIGQIATAVNALQKGKFPSDTEPNPKEQCKMVTLRSGRRLENGS 376
+ + + ++KNMEVQIGQIA +N +QKGKFPSD E P+E CK VTLRSG+ L+
Sbjct: 327 EVKLEGNTTSIKNMEVQIGQIAPTLNTMQKGKFPSDIEVKPREHCKAVTLRSGKELQEPE 386
BLAST of Lag0028246 vs. NCBI nr
Match:
XP_022843226.1 (uncharacterized protein LOC111366761 [Olea europaea var. sylvestris])
HSP 1 Score: 225.3 bits (573), Expect = 8.6e-55
Identity = 175/507 (34.52%), Postives = 248/507 (48.92%), Query Frame = 0
Query: 1 MQRNKVVNLFPLDLEIDRT---LRSIRREKRLAEV-----MAHQEEAPKAIRDFLQPVLP 60
M+R + ++L +D E +RT LR I+R +R A A+++ +AIRD+++PV+
Sbjct: 94 MRRARNLDLLHVDPEPERTFRILRGIQRNEREAMAEQDVRAANEDNQQRAIRDYIRPVVN 153
Query: 61 TENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEICGT-------- 120
SGI I A NFELK GLI MV N F G EDP++HL SFLEIC T
Sbjct: 154 DNYSGIARPAIVAKNFELKPGLIDMVQQNQFGGAAVEDPNAHLGSFLEICDTVKMNGVTE 213
Query: 121 -------------DKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQ 180
DKAK W +S+ +I+TWD+LAQ FLTK+FPP+K+ +L+ EI F+Q
Sbjct: 214 DAIRLRLFSFSLRDKAKAWFQSLPYGSITTWDDLAQKFLTKYFPPSKSAQLRGEISQFKQ 273
Query: 181 LDKEKLYEARERYKEMVRRCPQHGYPDWIQLS----------------------MANREG 240
LD E YEA ER+K+++RRCPQHG+ W+Q+ MA
Sbjct: 274 LDFEPFYEAWERFKDLLRRCPQHGFQKWVQIEIFYNGLNGQTRTMVDAAAGGILMAKTAE 333
Query: 241 SNY---------------------KKAGLYELDESSSLKAQLASLTNALNKLT---SSEV 300
+ Y K AGL+E+D ++L AQ+ASLTN + LT + +
Sbjct: 334 AAYALLDDIATNSYQWPSERSGVKKVAGLHEVDPITALAAQVASLTNQIVMLTTQGNQQN 393
Query: 301 VKSISTLAEGHSKKE------------------GQDMEEVH-------------HRQVLQ 360
V S+ + + H + E G H +R LQ
Sbjct: 394 VDSVISTSSSHQETEVANEQVQYIDSRNYNQRGGYQANHYHPGLRNHENLSYGNNRNTLQ 453
Query: 361 ------HQVSQKKNNLEEMVALFIKEQR-------ILNVSLQTSVNNHDAALKNMEVQIG 376
Q S K LE+++ FI E R + +++T V+ A +KN+EVQIG
Sbjct: 454 PPPGFNTQNSDGKPPLEDILGTFISETRSRFNKNELRLDNIETHVSKIGATMKNLEVQIG 513
BLAST of Lag0028246 vs. NCBI nr
Match:
KAG7947748.1 (hypothetical protein I3843_14G109500 [Carya illinoinensis])
HSP 1 Score: 223.4 bits (568), Expect = 3.3e-54
Identity = 158/461 (34.27%), Postives = 232/461 (50.33%), Query Frame = 0
Query: 36 QEEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHL 95
+E P+ ++D+++PV+ S I+ PI A NFELK LI MV F G P +DP+ HL
Sbjct: 6 REVLPRTLKDYVRPVVNGNYSSIMRQPINANNFELKPALISMVQQAQFSGSPLDDPNVHL 65
Query: 96 RSFLEICGT---------------------DKAKDWLESVETSNISTWDELAQAFLTKFF 155
FLEIC T DKA+ WL+S++ +I +W ++A+ FL KFF
Sbjct: 66 AMFLEICDTVKINGVTEDTIRLRLFPFSLRDKARGWLQSLQPGSIVSWQDMAERFLAKFF 125
Query: 156 PPAKTTKLQTEIGTFRQLDKEKLYEARERYKEMVRRCPQHGYPDWIQLSM---------- 215
PPAKT +L++EIG F+Q D E LYEA ERYK+++RRCPQHG PDW+Q+ M
Sbjct: 126 PPAKTAQLRSEIGQFKQNDFESLYEAWERYKDLIRRCPQHGLPDWLQVQMFYNGLNGQTR 185
Query: 216 -------------ANREG----------SNY----------KKAGLYELDESSSLKAQLA 275
EG +NY K AG++EL+ ++L AQ+A
Sbjct: 186 TIVDAASGGTLMSKTAEGATALLEEMASNNYQWPTERTLAKKVAGIHELEPIAALSAQVA 245
Query: 276 SLTNALNKLT------SSEVVKSISTLAEGHSKKE--------------GQDMEEVHH-- 335
+L++ ++ LT S+E V S S + + + G M +H
Sbjct: 246 TLSHQISALTTQRIPQSTEYVASTSMIVPSNEASQEQVQYVNNRNYNYRGNPMPNYYHPG 305
Query: 336 ------------RQVLQ--------HQVSQKKNNLEEMVALFIKE---------QRILNV 375
+ VLQ Q S+KK +LE+ + F++E R+ N+
Sbjct: 306 LRNHENLSYGNTKNVLQPQHPPGFDSQPSEKKMSLEDAMVSFVQETNARFKKTDSRLDNI 365
BLAST of Lag0028246 vs. ExPASy TrEMBL
Match:
A0A6J1DU19 (uncharacterized protein LOC111024361 OS=Momordica charantia OX=3673 GN=LOC111024361 PE=4 SV=1)
HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56
Identity = 164/405 (40.49%), Postives = 228/405 (56.30%), Query Frame = 0
Query: 43 IRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEIC 102
IRD+ QP P + GI+ PI A N ELK GLIQMV +N+F+G+ +EDP++HL FL++C
Sbjct: 27 IRDYCQPNFP-NHVGIINLPINANNSELKPGLIQMVRENTFRGNATEDPNNHLTIFLDVC 86
Query: 103 GTDKAKDWLES---VETSNISTWD-ELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKEKLY 162
GT K ++ + +S D E+ QAFLT FFPPAKTT+L+TEI +FR+ D E+L+
Sbjct: 87 GTVKMNGVIDDAIRLRLFPLSLQDKEMVQAFLTNFFPPAKTTQLRTEIRSFRKYDYEQLF 146
Query: 163 EARERYKEMVRRCPQHGYPDWIQLSMANR------------------------------- 222
E ERYKE++R+CPQHG +W+Q+ M
Sbjct: 147 EVWERYKELLRKCPQHGNLEWLQIQMFYNGLNGQTRTILDAAAGGTLLSRTPENAYILLK 206
Query: 223 -----------EGSNYKK-AGLYELDESSSLKAQLASLTNALNKLT------SSEVVKSI 282
E SN KK AG+YE+DE SSLKAQ+ +LTNA++KL+ S+E+V +
Sbjct: 207 DMADNSFQWPSERSNAKKVAGMYEIDELSSLKAQVQALTNAVSKLSGPGTSHSNELVAAT 266
Query: 283 STLAEGHSKKEGQDMEEVHHRQVLQHQVSQKKNNLEEMVALFIKE-----QRILN--VSL 342
T +S E + Q H ++KK++LE+++ FI E RI N +
Sbjct: 267 DT----YSYYE----PTIEQAQFTSHP-AEKKSSLEDLLGAFINECRSRASRIENQVEGM 326
Query: 343 QTSVNNHDAALKNMEVQIGQIATAVNALQKGKFPSDTEPNPKEQCKMVTLRSGRRLENGS 376
+ + + ++KNMEVQIGQIA +N +QKGKFPSD E P+E CK VTLRSG+ L+
Sbjct: 327 EVKLEGNTTSIKNMEVQIGQIAPTLNTMQKGKFPSDIEVKPREHCKAVTLRSGKELQEPE 386
BLAST of Lag0028246 vs. ExPASy TrEMBL
Match:
A0A6J0ZX64 (LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica OX=108875 GN=LOC110412945 PE=4 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 1.9e-47
Identity = 158/521 (30.33%), Postives = 237/521 (45.49%), Query Frame = 0
Query: 1 MQRNKVVNLFPLDLEIDRTLRSIRREK----RLAEVMAHQE------------EAPKAIR 60
MQR +NL P D +I+RT R RRE L + MA EA +A+R
Sbjct: 1 MQRRNNLNLVPFDPDIERTFRRHRRENLQVATLNQTMAEDNNNNGNNAINLVPEANRALR 60
Query: 61 DFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDN-SFKGHPSEDPHSHLRSFLEICG 120
D++ P++ + I I A NFE+K IQM+ + F G PS+DP+SHL +FLEIC
Sbjct: 61 DYVVPLVQGLHQSIRRPSINANNFEIKPAYIQMIQSSVQFSGLPSDDPNSHLVNFLEICD 120
Query: 121 T---------------------DKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKL 180
T DKAK WL S+ +I+TW++LAQ FL KFFPPAKT K+
Sbjct: 121 TFKYNGVTDDAIRLRLFPFSLRDKAKSWLNSLPNGSITTWEDLAQKFLAKFFPPAKTAKM 180
Query: 181 QTEIGTFRQLDKEKLYEARERYKEMVRRCPQHGYPDWIQLSM------------------ 240
+ +I +F Q D E LYEA ER+KE++RRCP HG PDW+Q+
Sbjct: 181 RNDITSFIQFDGESLYEAWERFKELLRRCPHHGIPDWLQVQTFYNGLVGSIKTIIDAAAG 240
Query: 241 --------------------------ANREGSNYKKAGLYELDESSSLKAQLASLTNALN 300
+ R GS K G YE+D +L Q+A+L+ L+
Sbjct: 241 GALMSKNAVDAYNLLEEMASNNYQWPSERSGSR-KAVGAYEIDALGTLTTQVAALSKKLD 300
Query: 301 KLTSSEVVKSI---STLAEGHS------------------KKEGQDMEEVHH-------- 360
L V S+ + HS +++ ++
Sbjct: 301 TLGVHAVQNSLVVCEMCGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPN 360
Query: 361 --------------------RQVLQHQVSQKKNNLEEMVALFIKEQRILNVSLQTSVNNH 373
+Q + Q+ +KK+ LEE++ +I + + + +
Sbjct: 361 FSWSNNAGPSNPKPIMPPGFQQQARPQIPEKKSQLEELLLQYISKTDAI-------IQSQ 420
BLAST of Lag0028246 vs. ExPASy TrEMBL
Match:
A0A2I4F4C8 (uncharacterized protein LOC108995373 OS=Juglans regia OX=51240 GN=LOC108995373 PE=4 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 9.3e-47
Identity = 140/391 (35.81%), Postives = 202/391 (51.66%), Query Frame = 0
Query: 40 PKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFL 99
P+ ++D+++PV+ SGI I A NFELK LI MV F P +DP+ HL FL
Sbjct: 10 PRTLKDYVRPVVNDNYSGIRRQTINANNFELKPALISMVQQAQFSRSPLDDPNIHLAMFL 69
Query: 100 EICGT---------------------DKAKDWLESVETSNISTWDELAQAFLTKFFPPAK 159
IC T DKA+ WL+S++ +I++W ++A+ FL KFFPPAK
Sbjct: 70 LICDTVKINGVTGDTIRLRLFPFSLRDKARGWLQSLQLGSITSWQDMAEKFLAKFFPPAK 129
Query: 160 TTKLQTEIGTFRQLDKEKLYEARERYKEMVRRCPQHGYPDWIQLSM-------------- 219
TT+L++EI F+Q D E LYEA ERYK ++R CPQHG P+W+Q+ M
Sbjct: 130 TTQLRSEISQFKQNDFESLYEAWERYKYLIRCCPQHGLPNWLQVQMFYNGLNGKTRTIVD 189
Query: 220 ANREGSNYKK----AGLYELDESSSLKAQLASLTNALNK--------LTSSEV--VKSIS 279
A G+ K A Y L+E +S Q + K LT+ + V + S
Sbjct: 190 AAAGGTLMSKTIEGAATYLLEEMTSNNYQWPTEKTMAKKVPGIHISALTTQRIQYVAATS 249
Query: 280 TLAEGHSKKEGQDMEEVHHRQV----LQHQVSQKKNNLEEMVALFIKEQRI-------LN 339
+ + + Q ++ +++R Q S+K +LE+ + F++E L
Sbjct: 250 MIVPSNEASQEQ-VQYINNRNYNYRGFDSQQSKKNMSLEDAIISFVEETNARFKKTDSLL 309
Query: 340 VSLQTSVNNHDAALKNMEVQIGQIATAVNALQKGKFPSDTEPNPKEQCKMVTLRSGRRLE 356
++ +N AA+KN+EVQIG++AT +NA Q+G FPS+TE NPKEQCK +TL+S R LE
Sbjct: 310 DNIDAHCSNMGAAIKNIEVQIGKLATIINAQQRGTFPSNTESNPKEQCKAITLKSIRELE 369
BLAST of Lag0028246 vs. ExPASy TrEMBL
Match:
A0A3S3N117 (Retrotrans_gag domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01212200 PE=4 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 2.7e-46
Identity = 159/494 (32.19%), Postives = 234/494 (47.37%), Query Frame = 0
Query: 1 MQRNKVVNLFPLDLEIDRTLRSIRREKRLA---EVMAHQEEAPKAIRDFLQPVLPTENSG 60
M+RN+ +NL PLD EI+RTLR +++EK+ E+ +E+A +++ D+ P++ S
Sbjct: 1 MRRNQNLNLVPLDPEIERTLRRLKKEKKQQSEFEITEMKEQANRSLGDYAVPLVTGATSS 60
Query: 61 IVYAPIQATNFELKTGLIQMVPDN-SFKGHPSEDPHSHLRSFLEICGT------------ 120
I IQA NFE+K +IQMV F G P +DP++H+ +FLE+C T
Sbjct: 61 IRRPVIQANNFEIKPAIIQMVASTVQFSGLPDDDPNAHISNFLELCDTFKYNGVTDDAVR 120
Query: 121 ---------DKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKE 180
DKAK WL S+ S I+TWDELA+ FL KFFPP KT K++ +I TF Q + E
Sbjct: 121 LRLLPFSLRDKAKAWLNSLPQSTITTWDELAKKFLAKFFPPTKTVKMRNDITTFAQNEME 180
Query: 181 KLYEARERYKEMVRRCPQHGYPDWIQ-------LSMANREG------------------- 240
LYEA ERYKE++R+CP HG P WIQ L A R
Sbjct: 181 SLYEAWERYKELLRKCPHHGLPLWIQVQTFYNGLQSATRTSIDAATGGTLMKKSPEEAYE 240
Query: 241 -------SNY----------KKAGLYELDESSSLKAQLASLTNALNKLTSSEVVKSISTL 300
+NY K G++ELD S+L AQ+A+L+ + + V+S + +
Sbjct: 241 LVEEMATNNYQWPSDHVQQKKIQGVHELDSISALTAQVANLSKQIQSM-KVHAVQSTNMV 300
Query: 301 AE----GHSKKEGQ------DMEEVHH--------------------------------- 360
E H + Q E+VH+
Sbjct: 301 CEFCAGNHMGVDCQVGNPFNSQEQVHYVSNYSRQNNPYSNTYNPGWRNHPNFSWNNAQNS 360
Query: 361 -RQV--LQHQVSQKKNNLEEMVALFIKEQRILNVSLQTSVNNHDAALK------------ 367
RQ Q ++K+ LE+M+A FI + + + + +HD ALK
Sbjct: 361 ARQPPRFQQPQQEEKSGLEKMMAQFISK-------VDSKLQDHDNALKCQENELKSQGIA 420
BLAST of Lag0028246 vs. ExPASy TrEMBL
Match:
A0A1S3UKD4 (uncharacterized protein LOC106766267 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766267 PE=4 SV=1)
HSP 1 Score: 180.3 bits (456), Expect = 1.5e-41
Identity = 141/481 (29.31%), Postives = 210/481 (43.66%), Query Frame = 0
Query: 13 DLEIDRTLRSIR-------REKRLAEVMAHQEEAP----------KAIRDFLQPVLPTEN 72
D I+RT RS R RE+R + QEE K IRD+ P
Sbjct: 13 DSRIERTARSNRSSARRRKRERRKEQRRIEQEEETSTMTEEQNPRKTIRDYSMPDPNGYQ 72
Query: 73 SGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEICGT----------- 132
IV PIQA NFE+K L+Q++ N F G SEDP+SHL +FL IC T
Sbjct: 73 GSIVRPPIQANNFEIKPALLQVIQQNQFGGAVSEDPNSHLENFLAICDTLKYNGVSDDAI 132
Query: 133 ----------DKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQLDK 192
DKAK+WL+S+ +ISTW+++A F+TK+FPP+K+ K++ EI +F Q D
Sbjct: 133 CLRLFPFSLRDKAKNWLQSLPQGSISTWEDMATXFVTKYFPPSKSAKMRNEITSFVQQDN 192
Query: 193 EKLYEARERYKEMVRRCPQHGYPDWIQLS------------------------------- 252
E LYEA ERYKE++R+CP H P+W+Q+
Sbjct: 193 ESLYEAWERYKELMRKCPHHALPEWLQVQTFYNGLSPTFKAMLDAASGGSFILKTPEEAL 252
Query: 253 -----MANRE-----GSNYKKAGLYELDESSSLKAQLASLTNALNKLTSSEVV---KSIS 312
MAN +K G+ E++ ++ AQ LT + LT + +++
Sbjct: 253 ETLELMANNTVXMQFDRXXRKVGVLEVNTLDAILAQNKXLTQQITDLTQKMGIMQANNVN 312
Query: 313 TLAEGHSKKEGQDME---EVHHRQVLQHQVSQKKN------------------------- 357
T + G+ G + H+ + V Q++N
Sbjct: 313 TRSPGYDFCGGMHQNGECQATHQDAQINAVGQQQNQFSTNFNANWRPQQTRPCSNPIQSN 372
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
WP_217833153.1 | 3.0e-71 | 39.87 | retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... | [more] |
KAG7990634.1 | 2.5e-62 | 35.93 | hypothetical protein I3843_02G035100 [Carya illinoinensis] | [more] |
XP_022157708.1 | 2.7e-56 | 40.49 | uncharacterized protein LOC111024361 [Momordica charantia] | [more] |
XP_022843226.1 | 8.6e-55 | 34.52 | uncharacterized protein LOC111366761 [Olea europaea var. sylvestris] | [more] |
KAG7947748.1 | 3.3e-54 | 34.27 | hypothetical protein I3843_14G109500 [Carya illinoinensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU19 | 1.3e-56 | 40.49 | uncharacterized protein LOC111024361 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J0ZX64 | 1.9e-47 | 30.33 | LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica ... | [more] |
A0A2I4F4C8 | 9.3e-47 | 35.81 | uncharacterized protein LOC108995373 OS=Juglans regia OX=51240 GN=LOC108995373 P... | [more] |
A0A3S3N117 | 2.7e-46 | 32.19 | Retrotrans_gag domain-containing protein OS=Cinnamomum micranthum f. kanehirae O... | [more] |
A0A1S3UKD4 | 1.5e-41 | 29.31 | uncharacterized protein LOC106766267 OS=Vigna radiata var. radiata OX=3916 GN=LO... | [more] |
Match Name | E-value | Identity | Description | |