Lag0028246 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028246
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr8: 16244089 .. 16245515 (-)
RNA-Seq ExpressionLag0028246
SyntenyLag0028246
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGGAACAAGGTGGTTAATTTGTTTCCGCTAGATCTTGAAATTGACAGGACTCTTAGATCCATTCGAAGAGAGAAAAGATTAGCAGAAGTGATGGCCCATCAAGAGGAAGCTCCCAAGGCAATTAGAGATTTCTTACAGCCAGTTCTTCCCACCGAGAATTCTGGAATTGTCTATGCCCCAATCCAAGCTACAAATTTTGAGTTAAAGACAGGATTGATTCAGATGGTGCCCGATAACTCGTTTAAGGGACATCCTTCCGAGGACCCCCATTCACATCTACGATCATTCCTAGAAATTTGTGGGACGGTGAAGATGAACGGAGTTCCGGCAGACGCGATAAGGTTGAGGCTGTTTCCATTTTCTCTATAGGATAAAGCAAAGGATTGGCTCGAATCAGTCGAGACGAGCAACATTAGTACTTGGGACGAGCTTGCCCAAGCTTTTCTGACGAAATTTTTTCCACCTGCCAAGACTACCAAGCTCCAGACTGAAATCGGAACGTTTAGGCAGCTTGACAAGGAGAAGTTGTACGAAGCGAGGGAAAGATACAAAGAAATGGTTAGGCGGTGCCCCCAACACGGATATCCTGATTGGATTCAAGTACAGTTATTTTACAATGGATTGAATCCCTCCACAAAGACGGTCCTAGACACATCAGCAGGAGGAAGTTTTCTTTCAAAAACAGTGACAAAGCCAAAGATCTGCTTGAGGAAATGGCGGCAACCAGTTATCAATGGCCAACCGAGAGGGGAGCAATTACAAAAAGGCTGGATTATATGAATTGGATGAGTCAAGTTCACTGAAGGCACAGCTGGCATCTCTGACCAATGCACTGAACAAGCTGACTTCATCTGAGGTGGTCAAGTCCATTTCCACCTTAGCTGAAGGTCATTCAAAGAAGGAAGGTCAAGATATGGAAGAAGTTCAGTACGTAGGAAATAGACCATATGTTCAAGGAGTACCGAACTTCTACCACCCCAGTCTTCGCAATCACGAGAACTTCTCATACTCAAATACAAAGAATGTTTTGCAGCCACCGCCAGGTTTTGCAGCATCAAGTGTCCCAAAAGAAAAATAACTTGGAGGAGATGGTGGCTTTATTCATCAAAGAACAAAGAATATTGAATGTGAGTCTCCAGACATCAGTAAATAACCACGACGCAGCTCTAAAGAACATGGAAGTGCAAATAGGACAGATTGCTACAGCAGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGTGATACTGAGCCTAACCCGAAAGAGCAGTGCAAGATGGTGACTCTGAGAAGTGGCAGAAGACTAGAGAACGGTTCAAAGAAGAAAAAGGAAGAAGAAAAGAGAAGGGATGAAGATGAAAGGACTAAGGCACAAAAAGCCTCCTCTGAAAGGGTCCAACATCCTCCAACTCTATTGATTTGA

mRNA sequence

ATGCAAAGGAACAAGGTGGTTAATTTGTTTCCGCTAGATCTTGAAATTGACAGGACTCTTAGATCCATTCGAAGAGAGAAAAGATTAGCAGAAGTGATGGCCCATCAAGAGGAAGCTCCCAAGGCAATTAGAGATTTCTTACAGCCAGTTCTTCCCACCGAGAATTCTGGAATTGTCTATGCCCCAATCCAAGCTACAAATTTTGAGTTAAAGACAGGATTGATTCAGATGGTGCCCGATAACTCGTTTAAGGGACATCCTTCCGAGGACCCCCATTCACATCTACGATCATTCCTAGAAATTTGTGGGACGGATAAAGCAAAGGATTGGCTCGAATCAGTCGAGACGAGCAACATTAGTACTTGGGACGAGCTTGCCCAAGCTTTTCTGACGAAATTTTTTCCACCTGCCAAGACTACCAAGCTCCAGACTGAAATCGGAACGTTTAGGCAGCTTGACAAGGAGAAGTTGTACGAAGCGAGGGAAAGATACAAAGAAATGGTTAGGCGGTGCCCCCAACACGGATATCCTGATTGGATTCAATTATCAATGGCCAACCGAGAGGGGAGCAATTACAAAAAGGCTGGATTATATGAATTGGATGAGTCAAGTTCACTGAAGGCACAGCTGGCATCTCTGACCAATGCACTGAACAAGCTGACTTCATCTGAGGTGGTCAAGTCCATTTCCACCTTAGCTGAAGGTCATTCAAAGAAGGAAGGTCAAGATATGGAAGAAGTTCACCACCGCCAGGTTTTGCAGCATCAAGTGTCCCAAAAGAAAAATAACTTGGAGGAGATGGTGGCTTTATTCATCAAAGAACAAAGAATATTGAATGTGAGTCTCCAGACATCAGTAAATAACCACGACGCAGCTCTAAAGAACATGGAAGTGCAAATAGGACAGATTGCTACAGCAGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGTGATACTGAGCCTAACCCGAAAGAGCAGTGCAAGATGGTGACTCTGAGAAGTGGCAGAAGACTAGAGAACGGTTCAAAGAAGAAAAAGGAAGAAGAAAAGAGAAGGGATGAAGATGAAAGGACTAAGGCACAAAAAGCCTCCTCTGAAAGGGTCCAACATCCTCCAACTCTATTGATTTGA

Coding sequence (CDS)

ATGCAAAGGAACAAGGTGGTTAATTTGTTTCCGCTAGATCTTGAAATTGACAGGACTCTTAGATCCATTCGAAGAGAGAAAAGATTAGCAGAAGTGATGGCCCATCAAGAGGAAGCTCCCAAGGCAATTAGAGATTTCTTACAGCCAGTTCTTCCCACCGAGAATTCTGGAATTGTCTATGCCCCAATCCAAGCTACAAATTTTGAGTTAAAGACAGGATTGATTCAGATGGTGCCCGATAACTCGTTTAAGGGACATCCTTCCGAGGACCCCCATTCACATCTACGATCATTCCTAGAAATTTGTGGGACGGATAAAGCAAAGGATTGGCTCGAATCAGTCGAGACGAGCAACATTAGTACTTGGGACGAGCTTGCCCAAGCTTTTCTGACGAAATTTTTTCCACCTGCCAAGACTACCAAGCTCCAGACTGAAATCGGAACGTTTAGGCAGCTTGACAAGGAGAAGTTGTACGAAGCGAGGGAAAGATACAAAGAAATGGTTAGGCGGTGCCCCCAACACGGATATCCTGATTGGATTCAATTATCAATGGCCAACCGAGAGGGGAGCAATTACAAAAAGGCTGGATTATATGAATTGGATGAGTCAAGTTCACTGAAGGCACAGCTGGCATCTCTGACCAATGCACTGAACAAGCTGACTTCATCTGAGGTGGTCAAGTCCATTTCCACCTTAGCTGAAGGTCATTCAAAGAAGGAAGGTCAAGATATGGAAGAAGTTCACCACCGCCAGGTTTTGCAGCATCAAGTGTCCCAAAAGAAAAATAACTTGGAGGAGATGGTGGCTTTATTCATCAAAGAACAAAGAATATTGAATGTGAGTCTCCAGACATCAGTAAATAACCACGACGCAGCTCTAAAGAACATGGAAGTGCAAATAGGACAGATTGCTACAGCAGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGTGATACTGAGCCTAACCCGAAAGAGCAGTGCAAGATGGTGACTCTGAGAAGTGGCAGAAGACTAGAGAACGGTTCAAAGAAGAAAAAGGAAGAAGAAAAGAGAAGGGATGAAGATGAAAGGACTAAGGCACAAAAAGCCTCCTCTGAAAGGGTCCAACATCCTCCAACTCTATTGATTTGA

Protein sequence

MQRNKVVNLFPLDLEIDRTLRSIRREKRLAEVMAHQEEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEICGTDKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKEKLYEARERYKEMVRRCPQHGYPDWIQLSMANREGSNYKKAGLYELDESSSLKAQLASLTNALNKLTSSEVVKSISTLAEGHSKKEGQDMEEVHHRQVLQHQVSQKKNNLEEMVALFIKEQRILNVSLQTSVNNHDAALKNMEVQIGQIATAVNALQKGKFPSDTEPNPKEQCKMVTLRSGRRLENGSKKKKEEEKRRDEDERTKAQKASSERVQHPPTLLI
Homology
BLAST of Lag0028246 vs. NCBI nr
Match: WP_217833153.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 280.0 bits (715), Expect = 3.0e-71
Identity = 185/464 (39.87%), Postives = 247/464 (53.23%), Query Frame = 0

Query: 8   NLFPLDLEIDRTLRSIRREKRLAEVMAHQEEAPKAIRDFLQPVLPTENSGIVYAPIQATN 67
           NL PLD EIDRT R   R   L +     EE PKAIRD+ QP LP    GI+  PI   N
Sbjct: 23  NLLPLDPEIDRTYRRNLR-ALLNQTTEMAEEIPKAIRDYFQPTLPASQPGIMNVPINVNN 82

Query: 68  FELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEICGT---------------------DK 127
           FELK GLIQM  + +F+G  +EDPH HLRSFLEICGT                     D+
Sbjct: 83  FELKPGLIQMARELAFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDR 142

Query: 128 AKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKEKLYEARERYKE 187
           AKDWLE++   +I+TW+ LAQAFL K+FPPAK+ +L+TEIGTFRQL+ E+LYEA ERYK+
Sbjct: 143 AKDWLETIPPDSITTWEILAQAFLNKYFPPAKSQRLRTEIGTFRQLEDEQLYEAWERYKD 202

Query: 188 MVRRCPQHGYPDWIQLSM--------------ANREGSNYKK------------------ 247
           ++RRCPQHGYPDW+Q+ +              A   GS + K                  
Sbjct: 203 LLRRCPQHGYPDWLQIQLFYNGLASSTKSILDATAGGSIFSKNAQEAYTILEDLATTSYN 262

Query: 248 -------------AGLYELDESSSLKAQLASLTNALNKLTSS-------EVVKSISTLAE 307
                        AGLYE+DE +SLKAQ+ASLTNAL+KLT+          + S++ LA 
Sbjct: 263 WPCERASPNIPKAAGLYEVDEVNSLKAQMASLTNALSKLTAGGQAQTNPPSIASLAALAS 322

Query: 308 G---HSKKEGQDMEEVHHRQVLQHQV---------------------------------- 355
               H   E  +  +  H +  QHQ                                   
Sbjct: 323 EMGVHGDNETANYVDRGHYRNYQHQQLPTHYHPNLRNHENFSYANNKNVLQAPQGFNGAG 382

BLAST of Lag0028246 vs. NCBI nr
Match: KAG7990634.1 (hypothetical protein I3843_02G035100 [Carya illinoinensis])

HSP 1 Score: 250.4 bits (638), Expect = 2.5e-62
Identity = 166/462 (35.93%), Postives = 244/462 (52.81%), Query Frame = 0

Query: 1   MQRNKVVNLFPLDLEIDRTLRSIRREKRLAEVMAHQEEAPKAIRDFLQPVLPTENSGIVY 60
           M+R +  ++ P+D EI+RTLRS+RR K LA     +E  P+ ++D+++PV+    S I+ 
Sbjct: 1   MRRARSRDIIPVDPEIERTLRSLRRNKILAMAEEDREVLPRTLKDYVRPVVNGNYSSIMR 60

Query: 61  APIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEICGT---------------- 120
            PI A NFELK  LI MV    F G P +DP+ HL  FLEIC T                
Sbjct: 61  QPINANNFELKPALISMVQQAQFSGSPLDDPNIHLAMFLEICDTVKINGVTEDTIRLRLF 120

Query: 121 -----DKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKEKLYE 180
                DKA+ WL+S++  +I +W ++A+ FL KFFPPAKT +L++EIG F+Q D E LYE
Sbjct: 121 PFSLRDKARGWLQSLQPGSIVSWQDMAERFLAKFFPPAKTAQLRSEIGQFKQNDFESLYE 180

Query: 181 ARERYKEMVRRCPQHGYPDWIQLSM-----------------------ANREG------- 240
           A ERYK+++RRCPQHG PDW+Q+ M                          EG       
Sbjct: 181 AWERYKDLIRRCPQHGLPDWLQVQMFYNGLNGQTRTIVDAASGGTLMSKTAEGATALLEE 240

Query: 241 ---SNY----------KKAGLYELDESSSLKAQLASLTNALNKLTSSEVVKSISTLA--- 300
              +NY          K AG+++L+  ++L AQ+A+L++ ++ LT+  + +S   LA   
Sbjct: 241 MASNNYQWPTERTLAKKVAGIHDLEPIAALSAQVATLSHQISALTTQRIPQSTEYLASTS 300

Query: 301 ----EGHSKKE-------------GQDMEEVHH--------------RQVLQ-------- 348
                  + +E             G  M   +H              + VLQ        
Sbjct: 301 MIVPSNEASQEQVQYVNNRNYNYRGNPMPNYYHPGLRNHENLSYGNTKNVLQPQHPPGFD 360

BLAST of Lag0028246 vs. NCBI nr
Match: XP_022157708.1 (uncharacterized protein LOC111024361 [Momordica charantia])

HSP 1 Score: 230.3 bits (586), Expect = 2.7e-56
Identity = 164/405 (40.49%), Postives = 228/405 (56.30%), Query Frame = 0

Query: 43  IRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEIC 102
           IRD+ QP  P  + GI+  PI A N ELK GLIQMV +N+F+G+ +EDP++HL  FL++C
Sbjct: 27  IRDYCQPNFP-NHVGIINLPINANNSELKPGLIQMVRENTFRGNATEDPNNHLTIFLDVC 86

Query: 103 GTDKAKDWLES---VETSNISTWD-ELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKEKLY 162
           GT K    ++    +    +S  D E+ QAFLT FFPPAKTT+L+TEI +FR+ D E+L+
Sbjct: 87  GTVKMNGVIDDAIRLRLFPLSLQDKEMVQAFLTNFFPPAKTTQLRTEIRSFRKYDYEQLF 146

Query: 163 EARERYKEMVRRCPQHGYPDWIQLSMANR------------------------------- 222
           E  ERYKE++R+CPQHG  +W+Q+ M                                  
Sbjct: 147 EVWERYKELLRKCPQHGNLEWLQIQMFYNGLNGQTRTILDAAAGGTLLSRTPENAYILLK 206

Query: 223 -----------EGSNYKK-AGLYELDESSSLKAQLASLTNALNKLT------SSEVVKSI 282
                      E SN KK AG+YE+DE SSLKAQ+ +LTNA++KL+      S+E+V + 
Sbjct: 207 DMADNSFQWPSERSNAKKVAGMYEIDELSSLKAQVQALTNAVSKLSGPGTSHSNELVAAT 266

Query: 283 STLAEGHSKKEGQDMEEVHHRQVLQHQVSQKKNNLEEMVALFIKE-----QRILN--VSL 342
            T    +S  E      +   Q   H  ++KK++LE+++  FI E      RI N    +
Sbjct: 267 DT----YSYYE----PTIEQAQFTSHP-AEKKSSLEDLLGAFINECRSRASRIENQVEGM 326

Query: 343 QTSVNNHDAALKNMEVQIGQIATAVNALQKGKFPSDTEPNPKEQCKMVTLRSGRRLENGS 376
           +  +  +  ++KNMEVQIGQIA  +N +QKGKFPSD E  P+E CK VTLRSG+ L+   
Sbjct: 327 EVKLEGNTTSIKNMEVQIGQIAPTLNTMQKGKFPSDIEVKPREHCKAVTLRSGKELQEPE 386

BLAST of Lag0028246 vs. NCBI nr
Match: XP_022843226.1 (uncharacterized protein LOC111366761 [Olea europaea var. sylvestris])

HSP 1 Score: 225.3 bits (573), Expect = 8.6e-55
Identity = 175/507 (34.52%), Postives = 248/507 (48.92%), Query Frame = 0

Query: 1   MQRNKVVNLFPLDLEIDRT---LRSIRREKRLAEV-----MAHQEEAPKAIRDFLQPVLP 60
           M+R + ++L  +D E +RT   LR I+R +R A        A+++   +AIRD+++PV+ 
Sbjct: 94  MRRARNLDLLHVDPEPERTFRILRGIQRNEREAMAEQDVRAANEDNQQRAIRDYIRPVVN 153

Query: 61  TENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEICGT-------- 120
              SGI    I A NFELK GLI MV  N F G   EDP++HL SFLEIC T        
Sbjct: 154 DNYSGIARPAIVAKNFELKPGLIDMVQQNQFGGAAVEDPNAHLGSFLEICDTVKMNGVTE 213

Query: 121 -------------DKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQ 180
                        DKAK W +S+   +I+TWD+LAQ FLTK+FPP+K+ +L+ EI  F+Q
Sbjct: 214 DAIRLRLFSFSLRDKAKAWFQSLPYGSITTWDDLAQKFLTKYFPPSKSAQLRGEISQFKQ 273

Query: 181 LDKEKLYEARERYKEMVRRCPQHGYPDWIQLS----------------------MANREG 240
           LD E  YEA ER+K+++RRCPQHG+  W+Q+                       MA    
Sbjct: 274 LDFEPFYEAWERFKDLLRRCPQHGFQKWVQIEIFYNGLNGQTRTMVDAAAGGILMAKTAE 333

Query: 241 SNY---------------------KKAGLYELDESSSLKAQLASLTNALNKLT---SSEV 300
           + Y                     K AGL+E+D  ++L AQ+ASLTN +  LT   + + 
Sbjct: 334 AAYALLDDIATNSYQWPSERSGVKKVAGLHEVDPITALAAQVASLTNQIVMLTTQGNQQN 393

Query: 301 VKSISTLAEGHSKKE------------------GQDMEEVH-------------HRQVLQ 360
           V S+ + +  H + E                  G      H             +R  LQ
Sbjct: 394 VDSVISTSSSHQETEVANEQVQYIDSRNYNQRGGYQANHYHPGLRNHENLSYGNNRNTLQ 453

Query: 361 ------HQVSQKKNNLEEMVALFIKEQR-------ILNVSLQTSVNNHDAALKNMEVQIG 376
                  Q S  K  LE+++  FI E R       +   +++T V+   A +KN+EVQIG
Sbjct: 454 PPPGFNTQNSDGKPPLEDILGTFISETRSRFNKNELRLDNIETHVSKIGATMKNLEVQIG 513

BLAST of Lag0028246 vs. NCBI nr
Match: KAG7947748.1 (hypothetical protein I3843_14G109500 [Carya illinoinensis])

HSP 1 Score: 223.4 bits (568), Expect = 3.3e-54
Identity = 158/461 (34.27%), Postives = 232/461 (50.33%), Query Frame = 0

Query: 36  QEEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHL 95
           +E  P+ ++D+++PV+    S I+  PI A NFELK  LI MV    F G P +DP+ HL
Sbjct: 6   REVLPRTLKDYVRPVVNGNYSSIMRQPINANNFELKPALISMVQQAQFSGSPLDDPNVHL 65

Query: 96  RSFLEICGT---------------------DKAKDWLESVETSNISTWDELAQAFLTKFF 155
             FLEIC T                     DKA+ WL+S++  +I +W ++A+ FL KFF
Sbjct: 66  AMFLEICDTVKINGVTEDTIRLRLFPFSLRDKARGWLQSLQPGSIVSWQDMAERFLAKFF 125

Query: 156 PPAKTTKLQTEIGTFRQLDKEKLYEARERYKEMVRRCPQHGYPDWIQLSM---------- 215
           PPAKT +L++EIG F+Q D E LYEA ERYK+++RRCPQHG PDW+Q+ M          
Sbjct: 126 PPAKTAQLRSEIGQFKQNDFESLYEAWERYKDLIRRCPQHGLPDWLQVQMFYNGLNGQTR 185

Query: 216 -------------ANREG----------SNY----------KKAGLYELDESSSLKAQLA 275
                           EG          +NY          K AG++EL+  ++L AQ+A
Sbjct: 186 TIVDAASGGTLMSKTAEGATALLEEMASNNYQWPTERTLAKKVAGIHELEPIAALSAQVA 245

Query: 276 SLTNALNKLT------SSEVVKSISTLAEGHSKKE--------------GQDMEEVHH-- 335
           +L++ ++ LT      S+E V S S +   +   +              G  M   +H  
Sbjct: 246 TLSHQISALTTQRIPQSTEYVASTSMIVPSNEASQEQVQYVNNRNYNYRGNPMPNYYHPG 305

Query: 336 ------------RQVLQ--------HQVSQKKNNLEEMVALFIKE---------QRILNV 375
                       + VLQ         Q S+KK +LE+ +  F++E          R+ N+
Sbjct: 306 LRNHENLSYGNTKNVLQPQHPPGFDSQPSEKKMSLEDAMVSFVQETNARFKKTDSRLDNI 365

BLAST of Lag0028246 vs. ExPASy TrEMBL
Match: A0A6J1DU19 (uncharacterized protein LOC111024361 OS=Momordica charantia OX=3673 GN=LOC111024361 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56
Identity = 164/405 (40.49%), Postives = 228/405 (56.30%), Query Frame = 0

Query: 43  IRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEIC 102
           IRD+ QP  P  + GI+  PI A N ELK GLIQMV +N+F+G+ +EDP++HL  FL++C
Sbjct: 27  IRDYCQPNFP-NHVGIINLPINANNSELKPGLIQMVRENTFRGNATEDPNNHLTIFLDVC 86

Query: 103 GTDKAKDWLES---VETSNISTWD-ELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKEKLY 162
           GT K    ++    +    +S  D E+ QAFLT FFPPAKTT+L+TEI +FR+ D E+L+
Sbjct: 87  GTVKMNGVIDDAIRLRLFPLSLQDKEMVQAFLTNFFPPAKTTQLRTEIRSFRKYDYEQLF 146

Query: 163 EARERYKEMVRRCPQHGYPDWIQLSMANR------------------------------- 222
           E  ERYKE++R+CPQHG  +W+Q+ M                                  
Sbjct: 147 EVWERYKELLRKCPQHGNLEWLQIQMFYNGLNGQTRTILDAAAGGTLLSRTPENAYILLK 206

Query: 223 -----------EGSNYKK-AGLYELDESSSLKAQLASLTNALNKLT------SSEVVKSI 282
                      E SN KK AG+YE+DE SSLKAQ+ +LTNA++KL+      S+E+V + 
Sbjct: 207 DMADNSFQWPSERSNAKKVAGMYEIDELSSLKAQVQALTNAVSKLSGPGTSHSNELVAAT 266

Query: 283 STLAEGHSKKEGQDMEEVHHRQVLQHQVSQKKNNLEEMVALFIKE-----QRILN--VSL 342
            T    +S  E      +   Q   H  ++KK++LE+++  FI E      RI N    +
Sbjct: 267 DT----YSYYE----PTIEQAQFTSHP-AEKKSSLEDLLGAFINECRSRASRIENQVEGM 326

Query: 343 QTSVNNHDAALKNMEVQIGQIATAVNALQKGKFPSDTEPNPKEQCKMVTLRSGRRLENGS 376
           +  +  +  ++KNMEVQIGQIA  +N +QKGKFPSD E  P+E CK VTLRSG+ L+   
Sbjct: 327 EVKLEGNTTSIKNMEVQIGQIAPTLNTMQKGKFPSDIEVKPREHCKAVTLRSGKELQEPE 386

BLAST of Lag0028246 vs. ExPASy TrEMBL
Match: A0A6J0ZX64 (LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica OX=108875 GN=LOC110412945 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.9e-47
Identity = 158/521 (30.33%), Postives = 237/521 (45.49%), Query Frame = 0

Query: 1   MQRNKVVNLFPLDLEIDRTLRSIRREK----RLAEVMAHQE------------EAPKAIR 60
           MQR   +NL P D +I+RT R  RRE      L + MA               EA +A+R
Sbjct: 1   MQRRNNLNLVPFDPDIERTFRRHRRENLQVATLNQTMAEDNNNNGNNAINLVPEANRALR 60

Query: 61  DFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDN-SFKGHPSEDPHSHLRSFLEICG 120
           D++ P++   +  I    I A NFE+K   IQM+  +  F G PS+DP+SHL +FLEIC 
Sbjct: 61  DYVVPLVQGLHQSIRRPSINANNFEIKPAYIQMIQSSVQFSGLPSDDPNSHLVNFLEICD 120

Query: 121 T---------------------DKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKL 180
           T                     DKAK WL S+   +I+TW++LAQ FL KFFPPAKT K+
Sbjct: 121 TFKYNGVTDDAIRLRLFPFSLRDKAKSWLNSLPNGSITTWEDLAQKFLAKFFPPAKTAKM 180

Query: 181 QTEIGTFRQLDKEKLYEARERYKEMVRRCPQHGYPDWIQLSM------------------ 240
           + +I +F Q D E LYEA ER+KE++RRCP HG PDW+Q+                    
Sbjct: 181 RNDITSFIQFDGESLYEAWERFKELLRRCPHHGIPDWLQVQTFYNGLVGSIKTIIDAAAG 240

Query: 241 --------------------------ANREGSNYKKAGLYELDESSSLKAQLASLTNALN 300
                                     + R GS  K  G YE+D   +L  Q+A+L+  L+
Sbjct: 241 GALMSKNAVDAYNLLEEMASNNYQWPSERSGSR-KAVGAYEIDALGTLTTQVAALSKKLD 300

Query: 301 KLTSSEVVKSI---STLAEGHS------------------KKEGQDMEEVHH-------- 360
            L    V  S+       + HS                  +++       ++        
Sbjct: 301 TLGVHAVQNSLVVCEMCGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPN 360

Query: 361 --------------------RQVLQHQVSQKKNNLEEMVALFIKEQRILNVSLQTSVNNH 373
                               +Q  + Q+ +KK+ LEE++  +I +   +       + + 
Sbjct: 361 FSWSNNAGPSNPKPIMPPGFQQQARPQIPEKKSQLEELLLQYISKTDAI-------IQSQ 420

BLAST of Lag0028246 vs. ExPASy TrEMBL
Match: A0A2I4F4C8 (uncharacterized protein LOC108995373 OS=Juglans regia OX=51240 GN=LOC108995373 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 9.3e-47
Identity = 140/391 (35.81%), Postives = 202/391 (51.66%), Query Frame = 0

Query: 40  PKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFL 99
           P+ ++D+++PV+    SGI    I A NFELK  LI MV    F   P +DP+ HL  FL
Sbjct: 10  PRTLKDYVRPVVNDNYSGIRRQTINANNFELKPALISMVQQAQFSRSPLDDPNIHLAMFL 69

Query: 100 EICGT---------------------DKAKDWLESVETSNISTWDELAQAFLTKFFPPAK 159
            IC T                     DKA+ WL+S++  +I++W ++A+ FL KFFPPAK
Sbjct: 70  LICDTVKINGVTGDTIRLRLFPFSLRDKARGWLQSLQLGSITSWQDMAEKFLAKFFPPAK 129

Query: 160 TTKLQTEIGTFRQLDKEKLYEARERYKEMVRRCPQHGYPDWIQLSM-------------- 219
           TT+L++EI  F+Q D E LYEA ERYK ++R CPQHG P+W+Q+ M              
Sbjct: 130 TTQLRSEISQFKQNDFESLYEAWERYKYLIRCCPQHGLPNWLQVQMFYNGLNGKTRTIVD 189

Query: 220 ANREGSNYKK----AGLYELDESSSLKAQLASLTNALNK--------LTSSEV--VKSIS 279
           A   G+   K    A  Y L+E +S   Q  +      K        LT+  +  V + S
Sbjct: 190 AAAGGTLMSKTIEGAATYLLEEMTSNNYQWPTEKTMAKKVPGIHISALTTQRIQYVAATS 249

Query: 280 TLAEGHSKKEGQDMEEVHHRQV----LQHQVSQKKNNLEEMVALFIKEQRI-------LN 339
            +   +   + Q ++ +++R         Q S+K  +LE+ +  F++E          L 
Sbjct: 250 MIVPSNEASQEQ-VQYINNRNYNYRGFDSQQSKKNMSLEDAIISFVEETNARFKKTDSLL 309

Query: 340 VSLQTSVNNHDAALKNMEVQIGQIATAVNALQKGKFPSDTEPNPKEQCKMVTLRSGRRLE 356
            ++    +N  AA+KN+EVQIG++AT +NA Q+G FPS+TE NPKEQCK +TL+S R LE
Sbjct: 310 DNIDAHCSNMGAAIKNIEVQIGKLATIINAQQRGTFPSNTESNPKEQCKAITLKSIRELE 369

BLAST of Lag0028246 vs. ExPASy TrEMBL
Match: A0A3S3N117 (Retrotrans_gag domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01212200 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.7e-46
Identity = 159/494 (32.19%), Postives = 234/494 (47.37%), Query Frame = 0

Query: 1   MQRNKVVNLFPLDLEIDRTLRSIRREKRLA---EVMAHQEEAPKAIRDFLQPVLPTENSG 60
           M+RN+ +NL PLD EI+RTLR +++EK+     E+   +E+A +++ D+  P++    S 
Sbjct: 1   MRRNQNLNLVPLDPEIERTLRRLKKEKKQQSEFEITEMKEQANRSLGDYAVPLVTGATSS 60

Query: 61  IVYAPIQATNFELKTGLIQMVPDN-SFKGHPSEDPHSHLRSFLEICGT------------ 120
           I    IQA NFE+K  +IQMV     F G P +DP++H+ +FLE+C T            
Sbjct: 61  IRRPVIQANNFEIKPAIIQMVASTVQFSGLPDDDPNAHISNFLELCDTFKYNGVTDDAVR 120

Query: 121 ---------DKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQLDKE 180
                    DKAK WL S+  S I+TWDELA+ FL KFFPP KT K++ +I TF Q + E
Sbjct: 121 LRLLPFSLRDKAKAWLNSLPQSTITTWDELAKKFLAKFFPPTKTVKMRNDITTFAQNEME 180

Query: 181 KLYEARERYKEMVRRCPQHGYPDWIQ-------LSMANREG------------------- 240
            LYEA ERYKE++R+CP HG P WIQ       L  A R                     
Sbjct: 181 SLYEAWERYKELLRKCPHHGLPLWIQVQTFYNGLQSATRTSIDAATGGTLMKKSPEEAYE 240

Query: 241 -------SNY----------KKAGLYELDESSSLKAQLASLTNALNKLTSSEVVKSISTL 300
                  +NY          K  G++ELD  S+L AQ+A+L+  +  +     V+S + +
Sbjct: 241 LVEEMATNNYQWPSDHVQQKKIQGVHELDSISALTAQVANLSKQIQSM-KVHAVQSTNMV 300

Query: 301 AE----GHSKKEGQ------DMEEVHH--------------------------------- 360
            E     H   + Q        E+VH+                                 
Sbjct: 301 CEFCAGNHMGVDCQVGNPFNSQEQVHYVSNYSRQNNPYSNTYNPGWRNHPNFSWNNAQNS 360

Query: 361 -RQV--LQHQVSQKKNNLEEMVALFIKEQRILNVSLQTSVNNHDAALK------------ 367
            RQ    Q    ++K+ LE+M+A FI +       + + + +HD ALK            
Sbjct: 361 ARQPPRFQQPQQEEKSGLEKMMAQFISK-------VDSKLQDHDNALKCQENELKSQGIA 420

BLAST of Lag0028246 vs. ExPASy TrEMBL
Match: A0A1S3UKD4 (uncharacterized protein LOC106766267 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766267 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-41
Identity = 141/481 (29.31%), Postives = 210/481 (43.66%), Query Frame = 0

Query: 13  DLEIDRTLRSIR-------REKRLAEVMAHQEEAP----------KAIRDFLQPVLPTEN 72
           D  I+RT RS R       RE+R  +    QEE            K IRD+  P      
Sbjct: 13  DSRIERTARSNRSSARRRKRERRKEQRRIEQEEETSTMTEEQNPRKTIRDYSMPDPNGYQ 72

Query: 73  SGIVYAPIQATNFELKTGLIQMVPDNSFKGHPSEDPHSHLRSFLEICGT----------- 132
             IV  PIQA NFE+K  L+Q++  N F G  SEDP+SHL +FL IC T           
Sbjct: 73  GSIVRPPIQANNFEIKPALLQVIQQNQFGGAVSEDPNSHLENFLAICDTLKYNGVSDDAI 132

Query: 133 ----------DKAKDWLESVETSNISTWDELAQAFLTKFFPPAKTTKLQTEIGTFRQLDK 192
                     DKAK+WL+S+   +ISTW+++A  F+TK+FPP+K+ K++ EI +F Q D 
Sbjct: 133 CLRLFPFSLRDKAKNWLQSLPQGSISTWEDMATXFVTKYFPPSKSAKMRNEITSFVQQDN 192

Query: 193 EKLYEARERYKEMVRRCPQHGYPDWIQLS------------------------------- 252
           E LYEA ERYKE++R+CP H  P+W+Q+                                
Sbjct: 193 ESLYEAWERYKELMRKCPHHALPEWLQVQTFYNGLSPTFKAMLDAASGGSFILKTPEEAL 252

Query: 253 -----MANRE-----GSNYKKAGLYELDESSSLKAQLASLTNALNKLTSSEVV---KSIS 312
                MAN           +K G+ E++   ++ AQ   LT  +  LT    +    +++
Sbjct: 253 ETLELMANNTVXMQFDRXXRKVGVLEVNTLDAILAQNKXLTQQITDLTQKMGIMQANNVN 312

Query: 313 TLAEGHSKKEGQDME---EVHHRQVLQHQVSQKKN------------------------- 357
           T + G+    G       +  H+    + V Q++N                         
Sbjct: 313 TRSPGYDFCGGMHQNGECQATHQDAQINAVGQQQNQFSTNFNANWRPQQTRPCSNPIQSN 372

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
WP_217833153.13.0e-7139.87retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... [more]
KAG7990634.12.5e-6235.93hypothetical protein I3843_02G035100 [Carya illinoinensis][more]
XP_022157708.12.7e-5640.49uncharacterized protein LOC111024361 [Momordica charantia][more]
XP_022843226.18.6e-5534.52uncharacterized protein LOC111366761 [Olea europaea var. sylvestris][more]
KAG7947748.13.3e-5434.27hypothetical protein I3843_14G109500 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU191.3e-5640.49uncharacterized protein LOC111024361 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J0ZX641.9e-4730.33LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica ... [more]
A0A2I4F4C89.3e-4735.81uncharacterized protein LOC108995373 OS=Juglans regia OX=51240 GN=LOC108995373 P... [more]
A0A3S3N1172.7e-4632.19Retrotrans_gag domain-containing protein OS=Cinnamomum micranthum f. kanehirae O... [more]
A0A1S3UKD41.5e-4129.31uncharacterized protein LOC106766267 OS=Vigna radiata var. radiata OX=3916 GN=LO... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 338..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..376
NoneNo IPR availablePANTHERPTHR33067FAMILY NOT NAMEDcoord: 257..333
NoneNo IPR availablePANTHERPTHR33067:SF27SUBFAMILY NOT NAMEDcoord: 257..333
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 104..180
e-value: 2.2E-13
score: 50.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028246.1Lag0028246.1mRNA