Lag0028153 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028153
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr8: 14641064 .. 14641849 (-)
RNA-Seq ExpressionLag0028153
SyntenyLag0028153
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAAGGAACAAGGTGGTTAATTTGTTTCCGCTAGATCTCGAAATTGACAGGACTCTTAGATCCATTCGGAGAGAGAAAAGATTAGCAGAAGCAATGGTCCATCAAGATGAAGCTCCCAAGGCAATCAGAGACTTCTTACAGCCAGTTCTTCCCACCGAGAATTCTGGAATTGTCTACGCCCCAGTCCAAGCTACCAATTTTGAGTTAAAGACAGAATTGATTCAGACGGCGCGCGATAACTCTTTTAAGGGACATCCTTCTGAGGACGCACACTCACATCTGCGATCATTCTTGGAAATATGTAGGACGGTGAAGATGAACGGAGTTCCGACAGACGCTATAAGATTGAGGCTGTTTCCATTTTCTCTACAAGACAAAGCAAAGGATTGGCTCGAATCAGTTGAGATGGGCAACATTAGTACATGGGACGAGCTTGCCCAGGCTTTTCTGACGAAATTTTTCCCGCCTGCCAAGACTACCAAGCTTCGGACTGAAATCGGAACGTTTAGGCAGCTTGATGAAGAGCAATTGTACGAGGCATGGGAAAGATACAAGGAAAGGCTTAGACGGTGCCCCAACATGGATATCCTGATTGGCTCCAAGTGCAGTTGTTTTACAATGATTGAATCTCTCCACCAAGACAGTCCTAGACACATCAGCAGGAGGAAGTTTTCTTTCCAAAACAGTAACGGAAGCCAAAGATTTGTTGGAGGAAATGGCGGCAACCAGTTATCAGTGGCCGACCGAGAGGGGAGCAATTTCAAAGAAGGTTGGAATTTATGA

mRNA sequence

ATGCGAAGGAACAAGGTGGTTAATTTGTTTCCGCTAGATCTCGAAATTGACAGGACTCTTAGATCCATTCGGAGAGAGAAAAGATTAGCAGAAGCAATGGTCCATCAAGATGAAGCTCCCAAGGCAATCAGAGACTTCTTACAGCCAGTTCTTCCCACCGAGAATTCTGGAATTGTCTACGCCCCAGTCCAAGCTACCAATTTTGAGTTAAAGACAGAATTGATTCAGACGGCGCGCGATAACTCTTTTAAGGGACATCCTTCTGAGGACGCACACTCACATCTGCGATCATTCTTGGAAATATGTAGGACGGTGAAGATGAACGGAGTTCCGACAGACGCTATAAGATTGAGGCTGTTTCCATTTTCTCTACAAGACAAAGCAAAGGATTGGCTCGAATCAGTTGAGATGGGCAACATTAGTACATGGGACGAGCTTGCCCAGGCTTTTCTGACGAAATTTTTCCCGCCTGCCAAGACTACCAAGCTTCGGACTGAAATCGGAACGTTTAGGCAGCTTGATGAAGAGCAATTGTACGAGGCATGGGAAAGATACAAGGAAAGGCTTAGACGGTGCCCCAACATGGATATCCTGATTGGCTCCAAGTGCAGTTGTTTTACAATGATTGAATCTCTCCACCAAGACAGTCCTAGACACATCAGCAGGAGGAAGTTTTCTTTCCAAAACAGTAACGGAAGCCAAAGATTTGTTGGAGGAAATGGCGGCAACCAGTTATCAGTGGCCGACCGAGAGGGGAGCAATTTCAAAGAAGGTTGGAATTTATGA

Coding sequence (CDS)

ATGCGAAGGAACAAGGTGGTTAATTTGTTTCCGCTAGATCTCGAAATTGACAGGACTCTTAGATCCATTCGGAGAGAGAAAAGATTAGCAGAAGCAATGGTCCATCAAGATGAAGCTCCCAAGGCAATCAGAGACTTCTTACAGCCAGTTCTTCCCACCGAGAATTCTGGAATTGTCTACGCCCCAGTCCAAGCTACCAATTTTGAGTTAAAGACAGAATTGATTCAGACGGCGCGCGATAACTCTTTTAAGGGACATCCTTCTGAGGACGCACACTCACATCTGCGATCATTCTTGGAAATATGTAGGACGGTGAAGATGAACGGAGTTCCGACAGACGCTATAAGATTGAGGCTGTTTCCATTTTCTCTACAAGACAAAGCAAAGGATTGGCTCGAATCAGTTGAGATGGGCAACATTAGTACATGGGACGAGCTTGCCCAGGCTTTTCTGACGAAATTTTTCCCGCCTGCCAAGACTACCAAGCTTCGGACTGAAATCGGAACGTTTAGGCAGCTTGATGAAGAGCAATTGTACGAGGCATGGGAAAGATACAAGGAAAGGCTTAGACGGTGCCCCAACATGGATATCCTGATTGGCTCCAAGTGCAGTTGTTTTACAATGATTGAATCTCTCCACCAAGACAGTCCTAGACACATCAGCAGGAGGAAGTTTTCTTTCCAAAACAGTAACGGAAGCCAAAGATTTGTTGGAGGAAATGGCGGCAACCAGTTATCAGTGGCCGACCGAGAGGGGAGCAATTTCAAAGAAGGTTGGAATTTATGA

Protein sequence

MRRNKVVNLFPLDLEIDRTLRSIRREKRLAEAMVHQDEAPKAIRDFLQPVLPTENSGIVYAPVQATNFELKTELIQTARDNSFKGHPSEDAHSHLRSFLEICRTVKMNGVPTDAIRLRLFPFSLQDKAKDWLESVEMGNISTWDELAQAFLTKFFPPAKTTKLRTEIGTFRQLDEEQLYEAWERYKERLRRCPNMDILIGSKCSCFTMIESLHQDSPRHISRRKFSFQNSNGSQRFVGGNGGNQLSVADREGSNFKEGWNL
Homology
BLAST of Lag0028153 vs. NCBI nr
Match: WP_217833153.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 243.0 bits (619), Expect = 2.8e-60
Identity = 119/186 (63.98%), Postives = 141/186 (75.81%), Query Frame = 0

Query: 8   NLFPLDLEIDRTLRSIRREKRLAEAMVHQDEAPKAIRDFLQPVLPTENSGIVYAPVQATN 67
           NL PLD EIDRT R   R   L +     +E PKAIRD+ QP LP    GI+  P+   N
Sbjct: 23  NLLPLDPEIDRTYRRNLR-ALLNQTTEMAEEIPKAIRDYFQPTLPASQPGIMNVPINVNN 82

Query: 68  FELKTELIQTARDNSFKGHPSEDAHSHLRSFLEICRTVKMNGVPTDAIRLRLFPFSLQDK 127
           FELK  LIQ AR+ +F+G  +ED H HLRSFLEIC TVKMNGV  DAI+LRLFPFSLQD+
Sbjct: 83  FELKPGLIQMARELAFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDR 142

Query: 128 AKDWLESVEMGNISTWDELAQAFLTKFFPPAKTTKLRTEIGTFRQLDEEQLYEAWERYKE 187
           AKDWLE++   +I+TW+ LAQAFL K+FPPAK+ +LRTEIGTFRQL++EQLYEAWERYK+
Sbjct: 143 AKDWLETIPPDSITTWEILAQAFLNKYFPPAKSQRLRTEIGTFRQLEDEQLYEAWERYKD 202

Query: 188 RLRRCP 194
            LRRCP
Sbjct: 203 LLRRCP 207

BLAST of Lag0028153 vs. NCBI nr
Match: KAG7990634.1 (hypothetical protein I3843_02G035100 [Carya illinoinensis])

HSP 1 Score: 216.9 bits (551), Expect = 2.1e-52
Identity = 103/193 (53.37%), Postives = 139/193 (72.02%), Query Frame = 0

Query: 1   MRRNKVVNLFPLDLEIDRTLRSIRREKRLAEAMVHQDEAPKAIRDFLQPVLPTENSGIVY 60
           MRR +  ++ P+D EI+RTLRS+RR K LA A   ++  P+ ++D+++PV+    S I+ 
Sbjct: 1   MRRARSRDIIPVDPEIERTLRSLRRNKILAMAEEDREVLPRTLKDYVRPVVNGNYSSIMR 60

Query: 61  APVQATNFELKTELIQTARDNSFKGHPSEDAHSHLRSFLEICRTVKMNGVPTDAIRLRLF 120
            P+ A NFELK  LI   +   F G P +D + HL  FLEIC TVK+NGV  D IRLRLF
Sbjct: 61  QPINANNFELKPALISMVQQAQFSGSPLDDPNIHLAMFLEICDTVKINGVTEDTIRLRLF 120

Query: 121 PFSLQDKAKDWLESVEMGNISTWDELAQAFLTKFFPPAKTTKLRTEIGTFRQLDEEQLYE 180
           PFSL+DKA+ WL+S++ G+I +W ++A+ FL KFFPPAKT +LR+EIG F+Q D E LYE
Sbjct: 121 PFSLRDKARGWLQSLQPGSIVSWQDMAERFLAKFFPPAKTAQLRSEIGQFKQNDFESLYE 180

Query: 181 AWERYKERLRRCP 194
           AWERYK+ +RRCP
Sbjct: 181 AWERYKDLIRRCP 193

BLAST of Lag0028153 vs. NCBI nr
Match: XP_022843226.1 (uncharacterized protein LOC111366761 [Olea europaea var. sylvestris])

HSP 1 Score: 203.4 bits (516), Expect = 2.4e-48
Identity = 107/201 (53.23%), Postives = 138/201 (68.66%), Query Frame = 0

Query: 1   MRRNKVVNLFPLDLEIDRT---LRSIRREKRLAEA-----MVHQDEAPKAIRDFLQPVLP 60
           MRR + ++L  +D E +RT   LR I+R +R A A       ++D   +AIRD+++PV+ 
Sbjct: 94  MRRARNLDLLHVDPEPERTFRILRGIQRNEREAMAEQDVRAANEDNQQRAIRDYIRPVVN 153

Query: 61  TENSGIVYAPVQATNFELKTELIQTARDNSFKGHPSEDAHSHLRSFLEICRTVKMNGVPT 120
              SGI    + A NFELK  LI   + N F G   ED ++HL SFLEIC TVKMNGV  
Sbjct: 154 DNYSGIARPAIVAKNFELKPGLIDMVQQNQFGGAAVEDPNAHLGSFLEICDTVKMNGVTE 213

Query: 121 DAIRLRLFPFSLQDKAKDWLESVEMGNISTWDELAQAFLTKFFPPAKTTKLRTEIGTFRQ 180
           DAIRLRLF FSL+DKAK W +S+  G+I+TWD+LAQ FLTK+FPP+K+ +LR EI  F+Q
Sbjct: 214 DAIRLRLFSFSLRDKAKAWFQSLPYGSITTWDDLAQKFLTKYFPPSKSAQLRGEISQFKQ 273

Query: 181 LDEEQLYEAWERYKERLRRCP 194
           LD E  YEAWER+K+ LRRCP
Sbjct: 274 LDFEPFYEAWERFKDLLRRCP 294

BLAST of Lag0028153 vs. NCBI nr
Match: RWR83368.1 (hypothetical protein CKAN_01212200 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 200.3 bits (508), Expect = 2.1e-47
Identity = 100/198 (50.51%), Postives = 135/198 (68.18%), Query Frame = 0

Query: 1   MRRNKVVNLFPLDLEIDRTLRSIRREKRLA---EAMVHQDEAPKAIRDFLQPVLPTENSG 60
           MRRN+ +NL PLD EI+RTLR +++EK+     E    +++A +++ D+  P++    S 
Sbjct: 1   MRRNQNLNLVPLDPEIERTLRRLKKEKKQQSEFEITEMKEQANRSLGDYAVPLVTGATSS 60

Query: 61  IVYAPVQATNFELKTELIQ-TARDNSFKGHPSEDAHSHLRSFLEICRTVKMNGVPTDAIR 120
           I    +QA NFE+K  +IQ  A    F G P +D ++H+ +FLE+C T K NGV  DA+R
Sbjct: 61  IRRPVIQANNFEIKPAIIQMVASTVQFSGLPDDDPNAHISNFLELCDTFKYNGVTDDAVR 120

Query: 121 LRLFPFSLQDKAKDWLESVEMGNISTWDELAQAFLTKFFPPAKTTKLRTEIGTFRQLDEE 180
           LRL PFSL+DKAK WL S+    I+TWDELA+ FL KFFPP KT K+R +I TF Q + E
Sbjct: 121 LRLLPFSLRDKAKAWLNSLPQSTITTWDELAKKFLAKFFPPTKTVKMRNDITTFAQNEME 180

Query: 181 QLYEAWERYKERLRRCPN 195
            LYEAWERYKE LR+CP+
Sbjct: 181 SLYEAWERYKELLRKCPH 198

BLAST of Lag0028153 vs. NCBI nr
Match: XP_022860306.1 (uncharacterized protein LOC111380876 [Olea europaea var. sylvestris])

HSP 1 Score: 195.7 bits (496), Expect = 5.1e-46
Identity = 92/159 (57.86%), Postives = 118/159 (74.21%), Query Frame = 0

Query: 35  HQDEAPKAIRDFLQPVLPTENSGIVYAPVQATNFELKTELIQTARDNSFKGHPSEDAHSH 94
           ++D   +AIRD+++PV+    SGI +  + A NFELK  LI   + N F G   ED ++H
Sbjct: 10  NEDNQQRAIRDYIRPVVNDNYSGIAHPAIAANNFELKPGLIHMVQQNHFGGAAVEDQNAH 69

Query: 95  LRSFLEICRTVKMNGVPTDAIRLRLFPFSLQDKAKDWLESVEMGNISTWDELAQAFLTKF 154
           L SFLEIC TVKMNGV  DAIRLRLF FSL+DKAK W +S+  G+I+TWD+LAQ FLTK+
Sbjct: 70  LGSFLEICDTVKMNGVTEDAIRLRLFSFSLRDKAKAWFQSLPYGSITTWDDLAQKFLTKY 129

Query: 155 FPPAKTTKLRTEIGTFRQLDEEQLYEAWERYKERLRRCP 194
           FPP+K+T+L +EI  F+QLD E  YEAWER+K+ LRRCP
Sbjct: 130 FPPSKSTQLHSEISQFKQLDFEPFYEAWERFKDLLRRCP 168

BLAST of Lag0028153 vs. ExPASy TrEMBL
Match: A0A3S3N117 (Retrotrans_gag domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01212200 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 100/198 (50.51%), Postives = 135/198 (68.18%), Query Frame = 0

Query: 1   MRRNKVVNLFPLDLEIDRTLRSIRREKRLA---EAMVHQDEAPKAIRDFLQPVLPTENSG 60
           MRRN+ +NL PLD EI+RTLR +++EK+     E    +++A +++ D+  P++    S 
Sbjct: 1   MRRNQNLNLVPLDPEIERTLRRLKKEKKQQSEFEITEMKEQANRSLGDYAVPLVTGATSS 60

Query: 61  IVYAPVQATNFELKTELIQ-TARDNSFKGHPSEDAHSHLRSFLEICRTVKMNGVPTDAIR 120
           I    +QA NFE+K  +IQ  A    F G P +D ++H+ +FLE+C T K NGV  DA+R
Sbjct: 61  IRRPVIQANNFEIKPAIIQMVASTVQFSGLPDDDPNAHISNFLELCDTFKYNGVTDDAVR 120

Query: 121 LRLFPFSLQDKAKDWLESVEMGNISTWDELAQAFLTKFFPPAKTTKLRTEIGTFRQLDEE 180
           LRL PFSL+DKAK WL S+    I+TWDELA+ FL KFFPP KT K+R +I TF Q + E
Sbjct: 121 LRLLPFSLRDKAKAWLNSLPQSTITTWDELAKKFLAKFFPPTKTVKMRNDITTFAQNEME 180

Query: 181 QLYEAWERYKERLRRCPN 195
            LYEAWERYKE LR+CP+
Sbjct: 181 SLYEAWERYKELLRKCPH 198

BLAST of Lag0028153 vs. ExPASy TrEMBL
Match: A0A6J0ZX64 (LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica OX=108875 GN=LOC110412945 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 3.2e-46
Identity = 105/214 (49.07%), Postives = 136/214 (63.55%), Query Frame = 0

Query: 1   MRRNKVVNLFPLDLEIDRTLRSIRREK----RLAEAMVHQD------------EAPKAIR 60
           M+R   +NL P D +I+RT R  RRE      L + M   +            EA +A+R
Sbjct: 1   MQRRNNLNLVPFDPDIERTFRRHRRENLQVATLNQTMAEDNNNNGNNAINLVPEANRALR 60

Query: 61  DFLQPVLPTENSGIVYAPVQATNFELKTELIQTARDN-SFKGHPSEDAHSHLRSFLEICR 120
           D++ P++   +  I    + A NFE+K   IQ  + +  F G PS+D +SHL +FLEIC 
Sbjct: 61  DYVVPLVQGLHQSIRRPSINANNFEIKPAYIQMIQSSVQFSGLPSDDPNSHLVNFLEICD 120

Query: 121 TVKMNGVPTDAIRLRLFPFSLQDKAKDWLESVEMGNISTWDELAQAFLTKFFPPAKTTKL 180
           T K NGV  DAIRLRLFPFSL+DKAK WL S+  G+I+TW++LAQ FL KFFPPAKT K+
Sbjct: 121 TFKYNGVTDDAIRLRLFPFSLRDKAKSWLNSLPNGSITTWEDLAQKFLAKFFPPAKTAKM 180

Query: 181 RTEIGTFRQLDEEQLYEAWERYKERLRRCPNMDI 198
           R +I +F Q D E LYEAWER+KE LRRCP+  I
Sbjct: 181 RNDITSFIQFDGESLYEAWERFKELLRRCPHHGI 214

BLAST of Lag0028153 vs. ExPASy TrEMBL
Match: A0A6J0ZYV0 (uncharacterized protein LOC110413413 OS=Herrania umbratica OX=108875 GN=LOC110413413 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 5.5e-46
Identity = 105/214 (49.07%), Postives = 135/214 (63.08%), Query Frame = 0

Query: 1   MRRNKVVNLFPLDLEIDRTLRSIRREK----RLAEAMVHQD------------EAPKAIR 60
           M+R   +NL P D +I+RT R  RRE      L + M   +            EA +A+R
Sbjct: 1   MQRRNNLNLVPFDPDIERTFRRHRRENLQVATLNQTMAEDNNNNGNNAINLVPEANRALR 60

Query: 61  DFLQPVLPTENSGIVYAPVQATNFELKTELIQTARDN-SFKGHPSEDAHSHLRSFLEICR 120
           D+  P++   +  I    + A NFE+K   IQ  + +  F G PS+D +SHL +FLEIC 
Sbjct: 61  DYAVPLVQGLHQSIRRPSINANNFEIKPAYIQMIQSSVQFSGLPSDDPNSHLVNFLEICD 120

Query: 121 TVKMNGVPTDAIRLRLFPFSLQDKAKDWLESVEMGNISTWDELAQAFLTKFFPPAKTTKL 180
           T K NGV  DAIRLRLFPFSL+DKAK WL S+  G+I+TW++LAQ FL KFFPPAKT K+
Sbjct: 121 TFKYNGVTDDAIRLRLFPFSLRDKAKSWLNSLPNGSITTWEDLAQKFLAKFFPPAKTAKM 180

Query: 181 RTEIGTFRQLDEEQLYEAWERYKERLRRCPNMDI 198
           R +I +F Q D E LYEAWER+KE LRRCP+  I
Sbjct: 181 RNDITSFIQFDGESLYEAWERFKELLRRCPHHGI 214

BLAST of Lag0028153 vs. ExPASy TrEMBL
Match: A0A1S3UKD4 (uncharacterized protein LOC106766267 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766267 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.0e-44
Identity = 98/199 (49.25%), Postives = 128/199 (64.32%), Query Frame = 0

Query: 13  DLEIDRTLRSIR-------REKRLAEAMVHQDEAP----------KAIRDFLQPVLPTEN 72
           D  I+RT RS R       RE+R  +  + Q+E            K IRD+  P      
Sbjct: 13  DSRIERTARSNRSSARRRKRERRKEQRRIEQEEETSTMTEEQNPRKTIRDYSMPDPNGYQ 72

Query: 73  SGIVYAPVQATNFELKTELIQTARDNSFKGHPSEDAHSHLRSFLEICRTVKMNGVPTDAI 132
             IV  P+QA NFE+K  L+Q  + N F G  SED +SHL +FL IC T+K NGV  DAI
Sbjct: 73  GSIVRPPIQANNFEIKPALLQVIQQNQFGGAVSEDPNSHLENFLAICDTLKYNGVSDDAI 132

Query: 133 RLRLFPFSLQDKAKDWLESVEMGNISTWDELAQAFLTKFFPPAKTTKLRTEIGTFRQLDE 192
            LRLFPFSL+DKAK+WL+S+  G+ISTW+++A  F+TK+FPP+K+ K+R EI +F Q D 
Sbjct: 133 CLRLFPFSLRDKAKNWLQSLPQGSISTWEDMATXFVTKYFPPSKSAKMRNEITSFVQQDN 192

Query: 193 EQLYEAWERYKERLRRCPN 195
           E LYEAWERYKE +R+CP+
Sbjct: 193 ESLYEAWERYKELMRKCPH 211

BLAST of Lag0028153 vs. ExPASy TrEMBL
Match: A0A7C9A3K2 (Retrotrans_gag domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 5.1e-44
Identity = 95/189 (50.26%), Postives = 124/189 (65.61%), Query Frame = 0

Query: 9   LFPLDLEIDRTLR---SIRREKRLAEAMVHQDEAPKAIRDFLQPVLPTENSGIVYAPVQA 68
           L P D EI+   R   S  R KR AEA + QD   + +RD++ P      S IV   ++A
Sbjct: 11  LVPFDPEIEAAARRRSSEARRKRRAEANMAQDN--RVLRDYILPQASGVTSSIVSPAMEA 70

Query: 69  TNFELKTELIQTARDNSFKGHPSEDAHSHLRSFLEICRTVKMNGVPTDAIRLRLFPFSLQ 128
            NFEL   LI       F GHPSE+ ++H+R FL  C T+K+NG  +DAIRLRLFPFSL+
Sbjct: 71  NNFELSPALISFVEREQFAGHPSENPNAHIRKFLAKCDTIKINGASSDAIRLRLFPFSLR 130

Query: 129 DKAKDWLESVEMGNISTWDELAQAFLTKFFPPAKTTKLRTEIGTFRQLDEEQLYEAWERY 188
           D+A DWL++ E  + +TWD L++AFL+K+FPP KT KLR EI +F Q D E LYEAWERY
Sbjct: 131 DRASDWLQNEEPNSFTTWDALSRAFLSKYFPPGKTAKLRAEITSFAQRDGESLYEAWERY 190

Query: 189 KERLRRCPN 195
           K+  R+CP+
Sbjct: 191 KDLQRQCPH 197

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
WP_217833153.12.8e-6063.98retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... [more]
KAG7990634.12.1e-5253.37hypothetical protein I3843_02G035100 [Carya illinoinensis][more]
XP_022843226.12.4e-4853.23uncharacterized protein LOC111366761 [Olea europaea var. sylvestris][more]
RWR83368.12.1e-4750.51hypothetical protein CKAN_01212200 [Cinnamomum micranthum f. kanehirae][more]
XP_022860306.15.1e-4657.86uncharacterized protein LOC111380876 [Olea europaea var. sylvestris][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A3S3N1171.0e-4750.51Retrotrans_gag domain-containing protein OS=Cinnamomum micranthum f. kanehirae O... [more]
A0A6J0ZX643.2e-4649.07LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica ... [more]
A0A6J0ZYV05.5e-4649.07uncharacterized protein LOC110413413 OS=Herrania umbratica OX=108875 GN=LOC11041... [more]
A0A1S3UKD41.0e-4449.25uncharacterized protein LOC106766267 OS=Vigna radiata var. radiata OX=3916 GN=LO... [more]
A0A7C9A3K25.1e-4450.26Retrotrans_gag domain-containing protein (Fragment) OS=Opuntia streptacantha OX=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 119..195
e-value: 7.9E-15
score: 54.9
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 89..195
NoneNo IPR availablePANTHERPTHR24559:SF334SUBFAMILY NOT NAMEDcoord: 89..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028153.1Lag0028153.1mRNA