Lag0028125 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028125
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H
Locationchr8: 13707570 .. 13709395 (-)
RNA-Seq ExpressionLag0028125
SyntenyLag0028125
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACCATCCAAGGGATGATCAGACTCCGGAAGGAAGTTGGGCCCAGCCACAAAAAGGTCCGCAGGAATTTGTCCTGAAACCAGCACCAGGTATGCATACAGAGAATAATGACAGGAAAAGGTTGGAGGCTCGAGTAGGGTCCAGGGCCGAGTAGGGCCAAAAAGGGCGAGAGAAGGAGCTATCCAAGTGGCTGAAAGAGGAAGACAACTATCGCGACTTCCAAAGGAGAACTGAGAATGAAGATATAGAAGGGCTAATTGGGCAGATGGAACCACCCTTCACTGACGAAATAATGGGAGGAGAGGTACCGTATAATTTAAGGTACCAAACTTCCCGCAGTACGATGGAAAGAAAGATCCGAAGCAGCACTTAGACGCATACCTTACCTAGATGGATTTTCATGGGGCGAATGAAGCGACAAGGTGTCGAGCCTTCGCGTTAACACTGACAGGTTTGGCAAGACAGTGGTTTAGCAAGATACAGCGGAGATCAATCGGTTCGTTCAATGAATTGGCACGGGCGTTTGTTAAGCAATTCTTAGGAGCTCGGAGCAGACAAAAACCCCAGATTAACCTACTGATAGTAACACAGGGGCGCGCGGAAGAGTCTGAAGGATTACATCAACAGGTTTAGTAACGAGGTATTATAGGTAGAAGACTATGACGATGGAGTTGCCTTGACCGCTGTGATTTCCGGTTTGCAGGATGAAAGGTTGCTCAACTCGATCGGTGAGAGCCAACCACGAACATATGTGGAATTCATGACCCGAGCACAAAGGTACATAGTGCTGAGGAACTGTTGAAATCCAAGCAGGAAGAGAGAGAGAACCGGGGAGTTTCTGTATCCGACCGACATCGAGAAGACAGAGGGAAAGGACGCCGAGTAGAAGATAGAGGTCGGAGCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAGGCCAAGGAGCCGCACGACCGCGCAAAACCAAAAGCCAAGTTTGACATGTATACACCTCTAACCGCTCTTCTTGAACAGGTTCTGGCTGCAATACAAGATACAAATCTGCTGAAACGTCCAAAAAAGTTAAAATCAGACCCAAACAAGAGAAACAGGAACAAATACTGCATGTTCCACGGAGACCACGACCACACAACTCAGAAGTGTATACATTTAAGGGATGAAATAGAAATCTTAATCCGAGAAGGCTACCTCAAGGAATTCGTGGGGAATGACAGAGGTAAAAGAGCATTACCAACAGATCAAGGTAAGAGAGGCAACAACCCATCGCTCGAGATACGAACAATTTTAGGAGGACCATCCGGTGGAGAGTTAGGCAAAAAGCGAAAGGTCGCGATTCGAGAGGCACGGCTAGAACCGAGAGAGTAAGGTATGTACTCGCTCCTACTCGATGAAAACTCGCTAAAATTGGAGTTTACAGAGAAAGAGGTCGCGAGAATACACCATTCGCACAATGACGCGCTGGTGGTCACCCTAACGAGTGCCAACGCAAAAGTTCACGGGATCCTCATTGACGGAGGGAGTTCTGCCGATGTCCTCTCAACCTCTGCGTTTGATGCAATGAAGCTAGGAAGGGATTGCCTGAAGCCGAGCCTCACACCATTGGTGGGTTTCCGTGGAGAAAAGGTAAATCCACAGGGGTTCATCGAGTTGTCGGTAACATTTGGTGAAGGACAACAATCGATCACAAGGTTAGTCAATTTCCTGGTAGTGGACTGCATGTCAGCGTACAATGCTATCTTGGGACGACCAACCCTGCATGGGCTAAAAGCAATGGCTTCCACTTATCACCAAGTACTGAAATTTCCAACTGAATAA

mRNA sequence

ATGCACCATCCAAGGGATGATCAGACTCCGGAAGGAAGTTGGGCCCAGCCACAAAAAGGTCCGCAGGAATTTGTCCTGAAACCAGCACCAGGTTTGGCAAGACAGTGGTTTAGCAAGATACAGCGGAGATCAATCGGTTCGTTCAATGAATTGGCACGGGCGTTTGTTAAGCAATTCTTAGGAGCTCGGAGCAGACAAAAACCCCAGATTAACCTACTGATAGTAACACAGGGGCGCGCGGAAGAGTCTGAAGGATTACATCAACAGGATGAAAGGTTGCTCAACTCGATCGGTGAGAGCCAACCACGAACATATGTGGAATTCATGACCCGAGCACAAAGAGGGAAAGGACGCCGAGTAGAAGATAGAGGTCGGAGCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAGGCCAAGGAGCCGCACGACCGCGCAAAACCAAAAGCCAAGTTTGACATGTATACACCTCTAACCGCTCTTCTTGAACAGGTTCTGGCTGCAATACAAGATACAAATCTGCTGAAACGTCCAAAAAAGTTAAAATCAGACCCAAACAAGAGAAACAGGAACAAATACTGCATGTTCCACGGAGACCACGACCACACAACTCAGAAGTGTATACATTTAAGGGATGAAATAGAAATCTTAATCCGAGAAGGCTACCTCAAGGAATTCGTGGGGAATGACAGAGGTAAAAGAGCATTACCAACAGATCAAGAGAAAGAGGTCGCGAGAATACACCATTCGCACAATGACGCGCTGGTGGTCACCCTAACGAGTGCCAACGCAAAAGTTCACGGGATCCTCATTGACGGAGGGAGTTCTGCCGATGTCCTCTCAACCTCTGCGTTTGATGCAATGAAGCTAGGAAGGGATTGCCTGAAGCCGAGCCTCACACCATTGGTGGGTTTCCGTGGAGAAAAGGTAAATCCACAGGGGTTCATCGAGTTGTCGGTAACATTTGGTGAAGGACAACAATCGATCACAAGGTTAGTCAATTTCCTGGTAGTGGACTGCATGTCAGCGTACAATGCTATCTTGGGACGACCAACCCTGCATGGGCTAAAAGCAATGGCTTCCACTTATCACCAAGTACTGAAATTTCCAACTGAATAA

Coding sequence (CDS)

ATGCACCATCCAAGGGATGATCAGACTCCGGAAGGAAGTTGGGCCCAGCCACAAAAAGGTCCGCAGGAATTTGTCCTGAAACCAGCACCAGGTTTGGCAAGACAGTGGTTTAGCAAGATACAGCGGAGATCAATCGGTTCGTTCAATGAATTGGCACGGGCGTTTGTTAAGCAATTCTTAGGAGCTCGGAGCAGACAAAAACCCCAGATTAACCTACTGATAGTAACACAGGGGCGCGCGGAAGAGTCTGAAGGATTACATCAACAGGATGAAAGGTTGCTCAACTCGATCGGTGAGAGCCAACCACGAACATATGTGGAATTCATGACCCGAGCACAAAGAGGGAAAGGACGCCGAGTAGAAGATAGAGGTCGGAGCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAGGCCAAGGAGCCGCACGACCGCGCAAAACCAAAAGCCAAGTTTGACATGTATACACCTCTAACCGCTCTTCTTGAACAGGTTCTGGCTGCAATACAAGATACAAATCTGCTGAAACGTCCAAAAAAGTTAAAATCAGACCCAAACAAGAGAAACAGGAACAAATACTGCATGTTCCACGGAGACCACGACCACACAACTCAGAAGTGTATACATTTAAGGGATGAAATAGAAATCTTAATCCGAGAAGGCTACCTCAAGGAATTCGTGGGGAATGACAGAGGTAAAAGAGCATTACCAACAGATCAAGAGAAAGAGGTCGCGAGAATACACCATTCGCACAATGACGCGCTGGTGGTCACCCTAACGAGTGCCAACGCAAAAGTTCACGGGATCCTCATTGACGGAGGGAGTTCTGCCGATGTCCTCTCAACCTCTGCGTTTGATGCAATGAAGCTAGGAAGGGATTGCCTGAAGCCGAGCCTCACACCATTGGTGGGTTTCCGTGGAGAAAAGGTAAATCCACAGGGGTTCATCGAGTTGTCGGTAACATTTGGTGAAGGACAACAATCGATCACAAGGTTAGTCAATTTCCTGGTAGTGGACTGCATGTCAGCGTACAATGCTATCTTGGGACGACCAACCCTGCATGGGCTAAAAGCAATGGCTTCCACTTATCACCAAGTACTGAAATTTCCAACTGAATAA

Protein sequence

MHHPRDDQTPEGSWAQPQKGPQEFVLKPAPGLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVTQGRAEESEGLHQQDERLLNSIGESQPRTYVEFMTRAQRGKGRRVEDRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKFDMYTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIEILIREGYLKEFVGNDRGKRALPTDQEKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSADVLSTSAFDAMKLGRDCLKPSLTPLVGFRGEKVNPQGFIELSVTFGEGQQSITRLVNFLVVDCMSAYNAILGRPTLHGLKAMASTYHQVLKFPTE
Homology
BLAST of Lag0028125 vs. NCBI nr
Match: XP_030955724.1 (uncharacterized protein LOC115977839 [Quercus lobata])

HSP 1 Score: 254.2 bits (648), Expect = 1.7e-63
Identity = 165/442 (37.33%), Postives = 222/442 (50.23%), Query Frame = 0

Query: 21  PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
           P E + +  P    G AR WFSKI   S+ SF EL++ FV  F+G +  ++   +LL + 
Sbjct: 76  PDEIMCRAFPTTLKGPARVWFSKIPPSSVSSFEELSKLFVNNFIGGQRHKRSSSSLLTIE 135

Query: 81  QGRAE-----------ESEGLHQQDERLL--------------NSIGESQPRTYVEFMTR 140
           QG  E           E+  + + D++LL              + + E +P+T    M  
Sbjct: 136 QGENESLRSFITRFNREALSVDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQT----MAE 195

Query: 141 AQRGKGRRVEDRGRSRHEHSSANGRGRAEAKEPHDRAK--PKAKFDMYTPLTALLEQVLA 200
            +R +  R+E       E +    +GR E ++  D  K  P  +   YTPL A L QVL 
Sbjct: 196 LKRKRAERMEAHPVRHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPLNQVLM 255

Query: 201 AIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIEILIREGYLKEFV 260
            I+D   LK P+K+K DPNKRN+NKYC FH DH H T +C  L+ +IE LIR+G LK FV
Sbjct: 256 QIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFV 315

Query: 261 GNDRGKRAL----------------------PTDQ------------------------- 320
           G DR    L                      P  Q                         
Sbjct: 316 GRDRTDEKLKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQNVQLSGRPPRTR 375

Query: 321 ----------EKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSADVLSTSAFDAMKL 375
                     +++  RIHH H+DA+V+TL  A+     +L+D GSSAD+L    F  M+L
Sbjct: 376 FMDEPTISFTDEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADILYYPTFQQMRL 435

BLAST of Lag0028125 vs. NCBI nr
Match: XP_030958631.1 (uncharacterized protein LOC115980538 [Quercus lobata])

HSP 1 Score: 252.3 bits (643), Expect = 6.6e-63
Identity = 169/455 (37.14%), Postives = 225/455 (49.45%), Query Frame = 0

Query: 21  PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
           P E + +  P    G AR WFSKI   S+ +F EL++ FV  F+G +  ++   +LL + 
Sbjct: 138 PDEIMCRAFPTTLKGPARVWFSKIPPSSVSTFEELSKLFVNNFIGGQRHKRSSSSLLTIE 197

Query: 81  QGRAE-----------ESEGLHQQDERLL--------------NSIGESQPRTYVEFMTR 140
           QG  E           E+  + + D++LL              + + E +P+T  E +  
Sbjct: 198 QGENESLRSFITRFNREALSVDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHS 257

Query: 141 AQ-------------RGKGRRVEDRGRSRHEHSSANGRGRAEAKEPHDRAK--PKAKFDM 200
           AQ             R +  R+E       E +    +GR E ++  D  K  P  +   
Sbjct: 258 AQNFMNAEDAIIAKKRKRAERMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQN 317

Query: 201 YTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEI 260
           YTPL A L QVL  I+D   LK P+K+K DPNKRN+NKYC FH DH H T +C  L+ +I
Sbjct: 318 YTPLNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQI 377

Query: 261 EILIREGYLKEFVGNDR------GK----------------------------------- 320
           E LIR+G LK FVG DR      GK                                   
Sbjct: 378 ENLIRQGKLKHFVGRDRTDEKQKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAV 437

Query: 321 ----------RALPTDQ------EKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSA 375
                     R  P D+       ++  RIHH H+DA+V+TL  A+     +L+D GSSA
Sbjct: 438 QNVQLSGRTPRTRPMDEPTISFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSA 497

BLAST of Lag0028125 vs. NCBI nr
Match: XP_030958629.1 (uncharacterized protein LOC115980536 [Quercus lobata])

HSP 1 Score: 252.3 bits (643), Expect = 6.6e-63
Identity = 169/455 (37.14%), Postives = 225/455 (49.45%), Query Frame = 0

Query: 21  PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
           P E + +  P    G AR WFSKI   S+ +F EL++ FV  F+G +  ++   +LL + 
Sbjct: 181 PDEIMCRAFPTTLKGPARVWFSKIPPSSVSTFEELSKLFVNNFIGGQRHKRSSSSLLTIE 240

Query: 81  QGRAE-----------ESEGLHQQDERLL--------------NSIGESQPRTYVEFMTR 140
           QG  E           E+  + + D++LL              + + E +P+T  E +  
Sbjct: 241 QGENESLRSFITRFNREALSVDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHS 300

Query: 141 AQ-------------RGKGRRVEDRGRSRHEHSSANGRGRAEAKEPHDRAK--PKAKFDM 200
           AQ             R +  R+E       E +    +GR E ++  D  K  P  +   
Sbjct: 301 AQNFMNAEDAIIAKKRKRAERMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQN 360

Query: 201 YTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEI 260
           YTPL A L QVL  I+D   LK P+K+K DPNKRN+NKYC FH DH H T +C  L+ +I
Sbjct: 361 YTPLNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQI 420

Query: 261 EILIREGYLKEFVGNDR------GK----------------------------------- 320
           E LIR+G LK FVG DR      GK                                   
Sbjct: 421 ENLIRQGKLKHFVGRDRTDEKQKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAV 480

Query: 321 ----------RALPTDQ------EKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSA 375
                     R  P D+       ++  RIHH H+DA+V+TL  A+     +L+D GSSA
Sbjct: 481 QNVQLSGRTPRTRPMDEPTISFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSA 540

BLAST of Lag0028125 vs. NCBI nr
Match: XP_030930616.1 (uncharacterized protein LOC115956348 [Quercus lobata])

HSP 1 Score: 248.1 bits (632), Expect = 1.2e-61
Identity = 170/455 (37.36%), Postives = 227/455 (49.89%), Query Frame = 0

Query: 21  PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
           P E + +  P    GLAR WFSKI   S+ SF EL++ FV  F+G +  +    +LL + 
Sbjct: 183 PDEIMCRAFPTTLKGLARVWFSKIPPNSMSSFEELSKLFVNNFIGGQRHKCSSSSLLTIE 242

Query: 81  QGRAE-----------ESEGLHQQDERLL--------------NSIGESQPRTYVEFMTR 140
           QG  E           E+  + + D++LL              + + E +P++  E +  
Sbjct: 243 QGENESLRSFITRFNREALSVDEADDKLLLAAFHNGVSSDLFIHKLYEKEPQSMAELVHS 302

Query: 141 AQR----------GKGRRVE--DRGRSRH-EHSSANGRGRAEAKEPHDRAKP--KAKFDM 200
           AQ            K +R E  D   SRH E      +GR E ++  D  KP   A+   
Sbjct: 303 AQNFMNAEDAIIVKKRKRYERVDTNPSRHLEQGPRPKKGRMEDRKDRDIKKPGSSARNQQ 362

Query: 201 YTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEI 260
           YT L   LEQVL  I+D   LK P+K++ DPNKRNRNKYC FH DH H T +C  L+ +I
Sbjct: 363 YTSLNVPLEQVLMQIKDDPSLKWPEKMRGDPNKRNRNKYCRFHRDHGHDTDECFDLKQQI 422

Query: 261 EILIREGYLKEFVGND-------------------------------------------- 320
           E LIR+G LK F+G D                                            
Sbjct: 423 ENLIRQGKLKNFLGRDNRDEKMKGKMEESSLPPLEEIRVIVGGSSTGQSSKSKKAYLKVV 482

Query: 321 -------RGKRALPTDQ------EKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSA 375
                  R  RA  TD+      +++  RIHH H+DALV+TL  A+     +L+D GSS 
Sbjct: 483 QSVQLSGRSPRARTTDEAAITFTDEDAERIHHPHDDALVITLMIADYTTRRVLVDNGSST 542

BLAST of Lag0028125 vs. NCBI nr
Match: XP_023916366.1 (uncharacterized protein LOC112027956 [Quercus suber])

HSP 1 Score: 246.1 bits (627), Expect = 4.7e-61
Identity = 164/454 (36.12%), Postives = 225/454 (49.56%), Query Frame = 0

Query: 21  PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
           P E + +  P    G AR WFSKI   S+ SF EL++ FV  F+G +  ++   +LL + 
Sbjct: 182 PDEIMCRAFPTTLKGPARVWFSKIPPNSVTSFEELSKLFVNNFIGGQRHKRSSSSLLTIE 241

Query: 81  QGRAE-----------ESEGLHQQDERLL--------------NSIGESQPRTYVEFMTR 140
           QG  E           ++  + + D++LL              + + E  P+T  E +  
Sbjct: 242 QGENESLRSFITRFNRDALAVDEVDDKLLLAAFHNGVHSDLFIHKLYEQAPQTMAELVHS 301

Query: 141 AQ-------------RGKGRRVEDRGRSRHEHSSANGRGRAEAKEPHD-RAKPKAKFDMY 200
           AQ             R +  RVE     + E      +GR + ++  D +A P A+   Y
Sbjct: 302 AQNFMNAEDAIIAKKRKRLERVEANPMRQSEQGPRPKKGRTKDRKDRDKKAGPSARNQQY 361

Query: 201 TPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIE 260
           TPL   LEQVL  I+D   LK P+K++ DPNKRNR+KYC FH DH H T +C  L+ +IE
Sbjct: 362 TPLNMPLEQVLMQIKDEPSLKWPEKMRGDPNKRNRSKYCRFHRDHGHDTDECFDLKQQIE 421

Query: 261 ILIREGYLKEFVGND--------------------------------------------- 320
            LIR+G LK F+G D                                             
Sbjct: 422 NLIRQGKLKNFLGRDHKDEKLKGKIEESSRPPLGEIRVIIGGSSAGQSSETKKAYLKEVQ 481

Query: 321 ------RGKRALPTDQ------EKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSAD 375
                 R  RA  TD+      +KE  RIHH H+DA+V+ L  A+     +L+D GSSAD
Sbjct: 482 SVQLFGRSPRARSTDEQTITFTDKEAERIHHPHDDAIVIALLIADYTTRRVLVDNGSSAD 541

BLAST of Lag0028125 vs. ExPASy TrEMBL
Match: A0A2N9ERC7 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5260 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.6e-57
Identity = 150/434 (34.56%), Postives = 218/434 (50.23%), Query Frame = 0

Query: 16  QPQKGPQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQIN 75
           Q Q  P+E + +  P    G AR WF+K++  SIGSF +L+RAFV  F+G++ R +P  +
Sbjct: 247 QLQAVPEEVMCRAFPLGLRGSARVWFNKLESESIGSFVQLSRAFVDHFIGSQRRGRPPTH 306

Query: 76  LLIVTQGRAEESEGLHQQDERLLNSIGESQPRTYVEFMTRAQRGKG-------------R 135
           LL V Q   E  EG+  +    L  + +  P T  E M  A +                +
Sbjct: 307 LLSVKQMEGESLEGIRLRKGDFLYDLCKDPPETMSELMYEATKHMNAEDALEAMDDPPPK 366

Query: 136 RVEDRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKFDMYTPLTALLEQVLAAIQDTNLLK 195
           R +D    + E +        E  E      P AKF  +TPL   ++++L  IQD   L+
Sbjct: 367 RRKDTEDRKPEPTKQKVPKFTETLERKRTTAPPAKFSSFTPLNTPIDKLLLQIQDDPSLR 426

Query: 196 RPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIEILIREGYLKEFV--------- 255
            P K++SDPN R +N YC FH DH H T++C+ L++++E LIR+G L+++V         
Sbjct: 427 WPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQVEALIRQGKLQKYVSRPAKPQAQ 486

Query: 256 -------------------------GNDRGKRALPTDQ---------------------- 315
                                    G  R  R     Q                      
Sbjct: 487 KEQTEHNRPGPIGEIRTIIGGPASGGTSRASRKAYARQVHNIMVVQRPPKNIRLDDHIIS 546

Query: 316 -EKEVAR-IHHSHNDALVVTLTSANAKVHGILIDGGSSADVLSTSAFDAMKLGRDCLKPS 375
             KE AR  H  H+DALV+T+  A      +++D GSSAD+L   A+  M+L +  L+P 
Sbjct: 547 FSKEDARGTHQPHDDALVITINIAGFTTRRVMVDNGSSADILYLPAYQQMRLDKGKLRPM 606

BLAST of Lag0028125 vs. ExPASy TrEMBL
Match: A0A2N9EKU0 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3233 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.4e-56
Identity = 147/402 (36.57%), Postives = 207/402 (51.49%), Query Frame = 0

Query: 21  PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
           P E + +  P    G AR WF K+   S+GSF +L+R F   F+G +   +P  +LL V 
Sbjct: 359 PDEIMCRAFPTTLKGPARIWFKKLMPSSVGSFAQLSRLFFNHFIGGQRYGRPTTHLLNVK 418

Query: 81  QGRAEESEGLHQQDERLLNSIGESQPRTYVEFMTRAQR---------------GKGRRVE 140
           Q          ++ E L + +    P T  E M  AQR               GK R+ +
Sbjct: 419 Q----------KEGETLRSYLTRDPPSTMTEMMYEAQRYMNGEEALLARDQATGKKRKGD 478

Query: 141 --DRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKFDMYTPLTALLEQVLAAIQDTNLLKR 200
             DR    HE      R R   +E         +F+ +TPL A ++ +   I++   LK 
Sbjct: 479 HADRPAEPHETRPKAQRNRNGRQEERSGRGFNERFNRFTPLNAPVDHIFMQIRNDPALKW 538

Query: 201 PKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIEILIREGYLKEFV---GNDRGKR 260
           P KL +DP+KR R+KYC FH DH H T+ C  L+ +IE LI++G L+ F+   G  R  R
Sbjct: 539 PGKLLTDPDKRPRDKYCRFHRDHGHNTENCYDLKRQIEELIKQGKLQRFIEKGGTSRSSR 598

Query: 261 A-----------------------LP-TDQEKEVARIHHSHNDALVVTLTSANAKVHGIL 320
                                   LP T  E++  ++ H H+DALVVT+  A      +L
Sbjct: 599 KAYARQIHNVLVTQKSNKKPRVEDLPITFTEEDACKVVHPHDDALVVTMEIAGYSTRRVL 658

Query: 321 IDGGSSADVLSTSAFDAMKLGRDCLKPSLTPLVGFRGEKVNPQGFIELSVTFGEGQQSIT 375
           ID GSSAD++  +AF  MK+G+D L+P  TPLVGF G  + P G + L +  G   +   
Sbjct: 659 IDNGSSADIIYLTAFQQMKIGKDQLQPIETPLVGFAGTSIYPLGMVTLQIIAGTHPKQAM 718

BLAST of Lag0028125 vs. ExPASy TrEMBL
Match: A0A2N9I9Q7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50579 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.4e-56
Identity = 157/425 (36.94%), Postives = 215/425 (50.59%), Query Frame = 0

Query: 21  PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
           P E + +  P    G AR WF KI   S+GSF +L+R F   F+G +   +P  +LL + 
Sbjct: 272 PNEIMCRAFPTTLKGPARVWFKKITPSSVGSFAQLSRLFFNHFIGGQRYGRPTTHLLNIK 331

Query: 81  QGRAE-----------ESEGLHQQDERL--------------LNSIGESQPRTYVEFMTR 140
           Q   E           E+  +   D+++              L S+ +  P T  E M  
Sbjct: 332 QKEGETLRSYLTRFNKETLLVDGADDKVVLTAFISGLQPGDFLFSVYKDPPSTMTEMMYE 391

Query: 141 AQR---------------GKGRRVE--DRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKF 200
           AQR               GK R+ E  DR    HE      R R   +E         +F
Sbjct: 392 AQRHMNGEEALLARDHTIGKKRKGEHPDRPAESHETRPKAQRNRNRRQEDRSGRGFNERF 451

Query: 201 DMYTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRD 260
           + +TPL A ++ +   I++   LK P KL +DP+KR R+KYC FH DH H T+ C  L+ 
Sbjct: 452 NHFTPLNAPVDHIFMQIRNDPALKWPSKLLTDPDKRPRDKYCRFHRDHGHNTEDCYDLKR 511

Query: 261 EIEILIREGYLKEFVGNDRGKRA------------------------LP-TDQEKEVARI 320
           +IE LI++G L+ FV  +RG+R                         LP T  E++  ++
Sbjct: 512 QIEELIKQGKLQRFV--ERGQREGRPQVASQQRPPVEKTDKKQRLEDLPITFTEEDARKV 571

Query: 321 HHSHNDALVVTLTSANAKVHGILIDGGSSADVLSTSAFDAMKLGRDCLKPSLTPLVGFRG 375
            H H+DALVVTL  A      +LID GSSAD +  +AF  MK+G D L+P  TPLVGF G
Sbjct: 572 LHPHDDALVVTLEIAGYSTRHVLIDNGSSADTIYLTAFQQMKIGNDQLQPIETPLVGFAG 631

BLAST of Lag0028125 vs. ExPASy TrEMBL
Match: A0A2N9G8B9 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23694 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.4e-56
Identity = 147/402 (36.57%), Postives = 207/402 (51.49%), Query Frame = 0

Query: 21  PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
           P E + +  P    G AR WF K+   S+GSF +L+R F   F+G +   +P  +LL V 
Sbjct: 281 PDEIMCRAFPTTLKGPARIWFKKLMPSSVGSFAQLSRLFFNHFIGGQRYGRPTTHLLNVK 340

Query: 81  QGRAEESEGLHQQDERLLNSIGESQPRTYVEFMTRAQR---------------GKGRRVE 140
           Q          ++ E L + +    P T  E M  AQR               GK R+ +
Sbjct: 341 Q----------KEGETLRSYLTRDPPSTMTEMMYEAQRYMNGEEALLARDQATGKKRKGD 400

Query: 141 --DRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKFDMYTPLTALLEQVLAAIQDTNLLKR 200
             DR    HE      R R   +E         +F+ +TPL A ++ +   I++   LK 
Sbjct: 401 HADRPAEPHETRPKAQRNRNGRQEERSGRGFNERFNRFTPLNAPVDHIFMQIRNDPALKW 460

Query: 201 PKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIEILIREGYLKEFV---GNDRGKR 260
           P KL +DP+KR R+KYC FH DH H T+ C  L+ +IE LI++G L+ F+   G  R  R
Sbjct: 461 PGKLLTDPDKRPRDKYCRFHRDHGHNTENCYDLKRQIEELIKQGKLQRFIEKGGTSRSSR 520

Query: 261 A-----------------------LP-TDQEKEVARIHHSHNDALVVTLTSANAKVHGIL 320
                                   LP T  E++  ++ H H+DALVVT+  A      +L
Sbjct: 521 KAYARQIHNVLVTQKSNKKPRVEDLPITFTEEDACKVVHPHDDALVVTMEIAGYSTRRVL 580

Query: 321 IDGGSSADVLSTSAFDAMKLGRDCLKPSLTPLVGFRGEKVNPQGFIELSVTFGEGQQSIT 375
           ID GSSAD++  +AF  MK+G+D L+P  TPLVGF G  + P G + L +  G   +   
Sbjct: 581 IDNGSSADIIYLTAFQQMKIGKDQLQPIETPLVGFAGTSIYPLGMVTLQIIAGTHPKQAM 640

BLAST of Lag0028125 vs. ExPASy TrEMBL
Match: A0A2N9EYR7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7874 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.2e-55
Identity = 153/423 (36.17%), Postives = 215/423 (50.83%), Query Frame = 0

Query: 21  PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
           P E + +  P    G AR WF KI   S+GSF +L+R F   F+GA+   +P  +LL + 
Sbjct: 7   PDEIMCRAFPTTLKGPARVWFKKITPGSVGSFAQLSRLFFNHFIGAQRYGRPTTHLLNIK 66

Query: 81  QGRAE-----------ESEGLHQQDERL--------------LNSIGESQPRTYVEFMTR 140
           Q   E           E+  +   D+++              L S+ +  P T  E M  
Sbjct: 67  QKEGETLRSYLTRFNKETLLVDGADDKVVLTAFISGLQAGDFLFSVYKDPPSTMTEMMYE 126

Query: 141 AQR---------------GKGRRVE--DRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKF 200
           AQR               GK R+ E  DR    HE      R R   +E         +F
Sbjct: 127 AQRHMNGEEALLARDQTIGKKRKWEHPDRPAESHETRPKAQRNRNRRQEDRSGRGFNERF 186

Query: 201 DMYTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRD 260
           + +TPL A ++ +   I++   LK P KL +DP+KR R+KYC FH DH H T+ C  L+ 
Sbjct: 187 NHFTPLNAPVDHIFMQIRNDPALKWPGKLLTDPDKRPRDKYCRFHRDHGHNTEDCYDLKR 246

Query: 261 EIEILIREGYLKEFV------GNDRGKRA----------------LP-TDQEKEVARIHH 320
           +IE LI++G L+ F+      G  +G R                 +P T  E++  ++ H
Sbjct: 247 QIEELIKQGKLQRFIERGQREGRPQGTRQQRPPVEKMDKKPRLEDIPITFGEEDARKLFH 306

Query: 321 SHNDALVVTLTSANAKVHGILIDGGSSADVLSTSAFDAMKLGRDCLKPSLTPLVGFRGEK 375
            H+DALV+TL  A      +LID GSSAD++  +AF  M++ +D L+P  TPLVGF G  
Sbjct: 307 PHDDALVITLEIAGYSTRRVLIDNGSSADIIYLTAFQQMRIDKDQLRPIETPLVGFAGTS 366

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030955724.11.7e-6337.33uncharacterized protein LOC115977839 [Quercus lobata][more]
XP_030958631.16.6e-6337.14uncharacterized protein LOC115980538 [Quercus lobata][more]
XP_030958629.16.6e-6337.14uncharacterized protein LOC115980536 [Quercus lobata][more]
XP_030930616.11.2e-6137.36uncharacterized protein LOC115956348 [Quercus lobata][more]
XP_023916366.14.7e-6136.12uncharacterized protein LOC112027956 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9ERC77.6e-5734.56Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5260 PE=4 SV=1[more]
A0A2N9EKU06.4e-5636.57Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3233 PE=4 SV=1[more]
A0A2N9I9Q76.4e-5636.94Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50579 PE=4 SV=1[more]
A0A2N9G8B96.4e-5636.57Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23694 PE=4 SV=1[more]
A0A2N9EYR74.2e-5536.17Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7874 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 240..374
e-value: 4.5E-9
score: 38.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..152
NoneNo IPR availablePANTHERPTHR33240OS08G0508500 PROTEINcoord: 256..371
coord: 153..231
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 256..371
coord: 153..231
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 271..356
e-value: 2.74466E-13
score: 63.1244

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028125.1Lag0028125.1mRNA