Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACCATCCAAGGGATGATCAGACTCCGGAAGGAAGTTGGGCCCAGCCACAAAAAGGTCCGCAGGAATTTGTCCTGAAACCAGCACCAGGTATGCATACAGAGAATAATGACAGGAAAAGGTTGGAGGCTCGAGTAGGGTCCAGGGCCGAGTAGGGCCAAAAAGGGCGAGAGAAGGAGCTATCCAAGTGGCTGAAAGAGGAAGACAACTATCGCGACTTCCAAAGGAGAACTGAGAATGAAGATATAGAAGGGCTAATTGGGCAGATGGAACCACCCTTCACTGACGAAATAATGGGAGGAGAGGTACCGTATAATTTAAGGTACCAAACTTCCCGCAGTACGATGGAAAGAAAGATCCGAAGCAGCACTTAGACGCATACCTTACCTAGATGGATTTTCATGGGGCGAATGAAGCGACAAGGTGTCGAGCCTTCGCGTTAACACTGACAGGTTTGGCAAGACAGTGGTTTAGCAAGATACAGCGGAGATCAATCGGTTCGTTCAATGAATTGGCACGGGCGTTTGTTAAGCAATTCTTAGGAGCTCGGAGCAGACAAAAACCCCAGATTAACCTACTGATAGTAACACAGGGGCGCGCGGAAGAGTCTGAAGGATTACATCAACAGGTTTAGTAACGAGGTATTATAGGTAGAAGACTATGACGATGGAGTTGCCTTGACCGCTGTGATTTCCGGTTTGCAGGATGAAAGGTTGCTCAACTCGATCGGTGAGAGCCAACCACGAACATATGTGGAATTCATGACCCGAGCACAAAGGTACATAGTGCTGAGGAACTGTTGAAATCCAAGCAGGAAGAGAGAGAGAACCGGGGAGTTTCTGTATCCGACCGACATCGAGAAGACAGAGGGAAAGGACGCCGAGTAGAAGATAGAGGTCGGAGCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAGGCCAAGGAGCCGCACGACCGCGCAAAACCAAAAGCCAAGTTTGACATGTATACACCTCTAACCGCTCTTCTTGAACAGGTTCTGGCTGCAATACAAGATACAAATCTGCTGAAACGTCCAAAAAAGTTAAAATCAGACCCAAACAAGAGAAACAGGAACAAATACTGCATGTTCCACGGAGACCACGACCACACAACTCAGAAGTGTATACATTTAAGGGATGAAATAGAAATCTTAATCCGAGAAGGCTACCTCAAGGAATTCGTGGGGAATGACAGAGGTAAAAGAGCATTACCAACAGATCAAGGTAAGAGAGGCAACAACCCATCGCTCGAGATACGAACAATTTTAGGAGGACCATCCGGTGGAGAGTTAGGCAAAAAGCGAAAGGTCGCGATTCGAGAGGCACGGCTAGAACCGAGAGAGTAAGGTATGTACTCGCTCCTACTCGATGAAAACTCGCTAAAATTGGAGTTTACAGAGAAAGAGGTCGCGAGAATACACCATTCGCACAATGACGCGCTGGTGGTCACCCTAACGAGTGCCAACGCAAAAGTTCACGGGATCCTCATTGACGGAGGGAGTTCTGCCGATGTCCTCTCAACCTCTGCGTTTGATGCAATGAAGCTAGGAAGGGATTGCCTGAAGCCGAGCCTCACACCATTGGTGGGTTTCCGTGGAGAAAAGGTAAATCCACAGGGGTTCATCGAGTTGTCGGTAACATTTGGTGAAGGACAACAATCGATCACAAGGTTAGTCAATTTCCTGGTAGTGGACTGCATGTCAGCGTACAATGCTATCTTGGGACGACCAACCCTGCATGGGCTAAAAGCAATGGCTTCCACTTATCACCAAGTACTGAAATTTCCAACTGAATAA
mRNA sequence
ATGCACCATCCAAGGGATGATCAGACTCCGGAAGGAAGTTGGGCCCAGCCACAAAAAGGTCCGCAGGAATTTGTCCTGAAACCAGCACCAGGTTTGGCAAGACAGTGGTTTAGCAAGATACAGCGGAGATCAATCGGTTCGTTCAATGAATTGGCACGGGCGTTTGTTAAGCAATTCTTAGGAGCTCGGAGCAGACAAAAACCCCAGATTAACCTACTGATAGTAACACAGGGGCGCGCGGAAGAGTCTGAAGGATTACATCAACAGGATGAAAGGTTGCTCAACTCGATCGGTGAGAGCCAACCACGAACATATGTGGAATTCATGACCCGAGCACAAAGAGGGAAAGGACGCCGAGTAGAAGATAGAGGTCGGAGCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAGGCCAAGGAGCCGCACGACCGCGCAAAACCAAAAGCCAAGTTTGACATGTATACACCTCTAACCGCTCTTCTTGAACAGGTTCTGGCTGCAATACAAGATACAAATCTGCTGAAACGTCCAAAAAAGTTAAAATCAGACCCAAACAAGAGAAACAGGAACAAATACTGCATGTTCCACGGAGACCACGACCACACAACTCAGAAGTGTATACATTTAAGGGATGAAATAGAAATCTTAATCCGAGAAGGCTACCTCAAGGAATTCGTGGGGAATGACAGAGGTAAAAGAGCATTACCAACAGATCAAGAGAAAGAGGTCGCGAGAATACACCATTCGCACAATGACGCGCTGGTGGTCACCCTAACGAGTGCCAACGCAAAAGTTCACGGGATCCTCATTGACGGAGGGAGTTCTGCCGATGTCCTCTCAACCTCTGCGTTTGATGCAATGAAGCTAGGAAGGGATTGCCTGAAGCCGAGCCTCACACCATTGGTGGGTTTCCGTGGAGAAAAGGTAAATCCACAGGGGTTCATCGAGTTGTCGGTAACATTTGGTGAAGGACAACAATCGATCACAAGGTTAGTCAATTTCCTGGTAGTGGACTGCATGTCAGCGTACAATGCTATCTTGGGACGACCAACCCTGCATGGGCTAAAAGCAATGGCTTCCACTTATCACCAAGTACTGAAATTTCCAACTGAATAA
Coding sequence (CDS)
ATGCACCATCCAAGGGATGATCAGACTCCGGAAGGAAGTTGGGCCCAGCCACAAAAAGGTCCGCAGGAATTTGTCCTGAAACCAGCACCAGGTTTGGCAAGACAGTGGTTTAGCAAGATACAGCGGAGATCAATCGGTTCGTTCAATGAATTGGCACGGGCGTTTGTTAAGCAATTCTTAGGAGCTCGGAGCAGACAAAAACCCCAGATTAACCTACTGATAGTAACACAGGGGCGCGCGGAAGAGTCTGAAGGATTACATCAACAGGATGAAAGGTTGCTCAACTCGATCGGTGAGAGCCAACCACGAACATATGTGGAATTCATGACCCGAGCACAAAGAGGGAAAGGACGCCGAGTAGAAGATAGAGGTCGGAGCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAGGCCAAGGAGCCGCACGACCGCGCAAAACCAAAAGCCAAGTTTGACATGTATACACCTCTAACCGCTCTTCTTGAACAGGTTCTGGCTGCAATACAAGATACAAATCTGCTGAAACGTCCAAAAAAGTTAAAATCAGACCCAAACAAGAGAAACAGGAACAAATACTGCATGTTCCACGGAGACCACGACCACACAACTCAGAAGTGTATACATTTAAGGGATGAAATAGAAATCTTAATCCGAGAAGGCTACCTCAAGGAATTCGTGGGGAATGACAGAGGTAAAAGAGCATTACCAACAGATCAAGAGAAAGAGGTCGCGAGAATACACCATTCGCACAATGACGCGCTGGTGGTCACCCTAACGAGTGCCAACGCAAAAGTTCACGGGATCCTCATTGACGGAGGGAGTTCTGCCGATGTCCTCTCAACCTCTGCGTTTGATGCAATGAAGCTAGGAAGGGATTGCCTGAAGCCGAGCCTCACACCATTGGTGGGTTTCCGTGGAGAAAAGGTAAATCCACAGGGGTTCATCGAGTTGTCGGTAACATTTGGTGAAGGACAACAATCGATCACAAGGTTAGTCAATTTCCTGGTAGTGGACTGCATGTCAGCGTACAATGCTATCTTGGGACGACCAACCCTGCATGGGCTAAAAGCAATGGCTTCCACTTATCACCAAGTACTGAAATTTCCAACTGAATAA
Protein sequence
MHHPRDDQTPEGSWAQPQKGPQEFVLKPAPGLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVTQGRAEESEGLHQQDERLLNSIGESQPRTYVEFMTRAQRGKGRRVEDRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKFDMYTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIEILIREGYLKEFVGNDRGKRALPTDQEKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSADVLSTSAFDAMKLGRDCLKPSLTPLVGFRGEKVNPQGFIELSVTFGEGQQSITRLVNFLVVDCMSAYNAILGRPTLHGLKAMASTYHQVLKFPTE
Homology
BLAST of Lag0028125 vs. NCBI nr
Match:
XP_030955724.1 (uncharacterized protein LOC115977839 [Quercus lobata])
HSP 1 Score: 254.2 bits (648), Expect = 1.7e-63
Identity = 165/442 (37.33%), Postives = 222/442 (50.23%), Query Frame = 0
Query: 21 PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
P E + + P G AR WFSKI S+ SF EL++ FV F+G + ++ +LL +
Sbjct: 76 PDEIMCRAFPTTLKGPARVWFSKIPPSSVSSFEELSKLFVNNFIGGQRHKRSSSSLLTIE 135
Query: 81 QGRAE-----------ESEGLHQQDERLL--------------NSIGESQPRTYVEFMTR 140
QG E E+ + + D++LL + + E +P+T M
Sbjct: 136 QGENESLRSFITRFNREALSVDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQT----MAE 195
Query: 141 AQRGKGRRVEDRGRSRHEHSSANGRGRAEAKEPHDRAK--PKAKFDMYTPLTALLEQVLA 200
+R + R+E E + +GR E ++ D K P + YTPL A L QVL
Sbjct: 196 LKRKRAERMEAHPVRHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPLNQVLM 255
Query: 201 AIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIEILIREGYLKEFV 260
I+D LK P+K+K DPNKRN+NKYC FH DH H T +C L+ +IE LIR+G LK FV
Sbjct: 256 QIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFV 315
Query: 261 GNDRGKRAL----------------------PTDQ------------------------- 320
G DR L P Q
Sbjct: 316 GRDRTDEKLKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQNVQLSGRPPRTR 375
Query: 321 ----------EKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSADVLSTSAFDAMKL 375
+++ RIHH H+DA+V+TL A+ +L+D GSSAD+L F M+L
Sbjct: 376 FMDEPTISFTDEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADILYYPTFQQMRL 435
BLAST of Lag0028125 vs. NCBI nr
Match:
XP_030958631.1 (uncharacterized protein LOC115980538 [Quercus lobata])
HSP 1 Score: 252.3 bits (643), Expect = 6.6e-63
Identity = 169/455 (37.14%), Postives = 225/455 (49.45%), Query Frame = 0
Query: 21 PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
P E + + P G AR WFSKI S+ +F EL++ FV F+G + ++ +LL +
Sbjct: 138 PDEIMCRAFPTTLKGPARVWFSKIPPSSVSTFEELSKLFVNNFIGGQRHKRSSSSLLTIE 197
Query: 81 QGRAE-----------ESEGLHQQDERLL--------------NSIGESQPRTYVEFMTR 140
QG E E+ + + D++LL + + E +P+T E +
Sbjct: 198 QGENESLRSFITRFNREALSVDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHS 257
Query: 141 AQ-------------RGKGRRVEDRGRSRHEHSSANGRGRAEAKEPHDRAK--PKAKFDM 200
AQ R + R+E E + +GR E ++ D K P +
Sbjct: 258 AQNFMNAEDAIIAKKRKRAERMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQN 317
Query: 201 YTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEI 260
YTPL A L QVL I+D LK P+K+K DPNKRN+NKYC FH DH H T +C L+ +I
Sbjct: 318 YTPLNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQI 377
Query: 261 EILIREGYLKEFVGNDR------GK----------------------------------- 320
E LIR+G LK FVG DR GK
Sbjct: 378 ENLIRQGKLKHFVGRDRTDEKQKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAV 437
Query: 321 ----------RALPTDQ------EKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSA 375
R P D+ ++ RIHH H+DA+V+TL A+ +L+D GSSA
Sbjct: 438 QNVQLSGRTPRTRPMDEPTISFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSA 497
BLAST of Lag0028125 vs. NCBI nr
Match:
XP_030958629.1 (uncharacterized protein LOC115980536 [Quercus lobata])
HSP 1 Score: 252.3 bits (643), Expect = 6.6e-63
Identity = 169/455 (37.14%), Postives = 225/455 (49.45%), Query Frame = 0
Query: 21 PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
P E + + P G AR WFSKI S+ +F EL++ FV F+G + ++ +LL +
Sbjct: 181 PDEIMCRAFPTTLKGPARVWFSKIPPSSVSTFEELSKLFVNNFIGGQRHKRSSSSLLTIE 240
Query: 81 QGRAE-----------ESEGLHQQDERLL--------------NSIGESQPRTYVEFMTR 140
QG E E+ + + D++LL + + E +P+T E +
Sbjct: 241 QGENESLRSFITRFNREALSVDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHS 300
Query: 141 AQ-------------RGKGRRVEDRGRSRHEHSSANGRGRAEAKEPHDRAK--PKAKFDM 200
AQ R + R+E E + +GR E ++ D K P +
Sbjct: 301 AQNFMNAEDAIIAKKRKRAERMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQN 360
Query: 201 YTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEI 260
YTPL A L QVL I+D LK P+K+K DPNKRN+NKYC FH DH H T +C L+ +I
Sbjct: 361 YTPLNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQI 420
Query: 261 EILIREGYLKEFVGNDR------GK----------------------------------- 320
E LIR+G LK FVG DR GK
Sbjct: 421 ENLIRQGKLKHFVGRDRTDEKQKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAV 480
Query: 321 ----------RALPTDQ------EKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSA 375
R P D+ ++ RIHH H+DA+V+TL A+ +L+D GSSA
Sbjct: 481 QNVQLSGRTPRTRPMDEPTISFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSA 540
BLAST of Lag0028125 vs. NCBI nr
Match:
XP_030930616.1 (uncharacterized protein LOC115956348 [Quercus lobata])
HSP 1 Score: 248.1 bits (632), Expect = 1.2e-61
Identity = 170/455 (37.36%), Postives = 227/455 (49.89%), Query Frame = 0
Query: 21 PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
P E + + P GLAR WFSKI S+ SF EL++ FV F+G + + +LL +
Sbjct: 183 PDEIMCRAFPTTLKGLARVWFSKIPPNSMSSFEELSKLFVNNFIGGQRHKCSSSSLLTIE 242
Query: 81 QGRAE-----------ESEGLHQQDERLL--------------NSIGESQPRTYVEFMTR 140
QG E E+ + + D++LL + + E +P++ E +
Sbjct: 243 QGENESLRSFITRFNREALSVDEADDKLLLAAFHNGVSSDLFIHKLYEKEPQSMAELVHS 302
Query: 141 AQR----------GKGRRVE--DRGRSRH-EHSSANGRGRAEAKEPHDRAKP--KAKFDM 200
AQ K +R E D SRH E +GR E ++ D KP A+
Sbjct: 303 AQNFMNAEDAIIVKKRKRYERVDTNPSRHLEQGPRPKKGRMEDRKDRDIKKPGSSARNQQ 362
Query: 201 YTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEI 260
YT L LEQVL I+D LK P+K++ DPNKRNRNKYC FH DH H T +C L+ +I
Sbjct: 363 YTSLNVPLEQVLMQIKDDPSLKWPEKMRGDPNKRNRNKYCRFHRDHGHDTDECFDLKQQI 422
Query: 261 EILIREGYLKEFVGND-------------------------------------------- 320
E LIR+G LK F+G D
Sbjct: 423 ENLIRQGKLKNFLGRDNRDEKMKGKMEESSLPPLEEIRVIVGGSSTGQSSKSKKAYLKVV 482
Query: 321 -------RGKRALPTDQ------EKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSA 375
R RA TD+ +++ RIHH H+DALV+TL A+ +L+D GSS
Sbjct: 483 QSVQLSGRSPRARTTDEAAITFTDEDAERIHHPHDDALVITLMIADYTTRRVLVDNGSST 542
BLAST of Lag0028125 vs. NCBI nr
Match:
XP_023916366.1 (uncharacterized protein LOC112027956 [Quercus suber])
HSP 1 Score: 246.1 bits (627), Expect = 4.7e-61
Identity = 164/454 (36.12%), Postives = 225/454 (49.56%), Query Frame = 0
Query: 21 PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
P E + + P G AR WFSKI S+ SF EL++ FV F+G + ++ +LL +
Sbjct: 182 PDEIMCRAFPTTLKGPARVWFSKIPPNSVTSFEELSKLFVNNFIGGQRHKRSSSSLLTIE 241
Query: 81 QGRAE-----------ESEGLHQQDERLL--------------NSIGESQPRTYVEFMTR 140
QG E ++ + + D++LL + + E P+T E +
Sbjct: 242 QGENESLRSFITRFNRDALAVDEVDDKLLLAAFHNGVHSDLFIHKLYEQAPQTMAELVHS 301
Query: 141 AQ-------------RGKGRRVEDRGRSRHEHSSANGRGRAEAKEPHD-RAKPKAKFDMY 200
AQ R + RVE + E +GR + ++ D +A P A+ Y
Sbjct: 302 AQNFMNAEDAIIAKKRKRLERVEANPMRQSEQGPRPKKGRTKDRKDRDKKAGPSARNQQY 361
Query: 201 TPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIE 260
TPL LEQVL I+D LK P+K++ DPNKRNR+KYC FH DH H T +C L+ +IE
Sbjct: 362 TPLNMPLEQVLMQIKDEPSLKWPEKMRGDPNKRNRSKYCRFHRDHGHDTDECFDLKQQIE 421
Query: 261 ILIREGYLKEFVGND--------------------------------------------- 320
LIR+G LK F+G D
Sbjct: 422 NLIRQGKLKNFLGRDHKDEKLKGKIEESSRPPLGEIRVIIGGSSAGQSSETKKAYLKEVQ 481
Query: 321 ------RGKRALPTDQ------EKEVARIHHSHNDALVVTLTSANAKVHGILIDGGSSAD 375
R RA TD+ +KE RIHH H+DA+V+ L A+ +L+D GSSAD
Sbjct: 482 SVQLFGRSPRARSTDEQTITFTDKEAERIHHPHDDAIVIALLIADYTTRRVLVDNGSSAD 541
BLAST of Lag0028125 vs. ExPASy TrEMBL
Match:
A0A2N9ERC7 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5260 PE=4 SV=1)
HSP 1 Score: 231.1 bits (588), Expect = 7.6e-57
Identity = 150/434 (34.56%), Postives = 218/434 (50.23%), Query Frame = 0
Query: 16 QPQKGPQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQIN 75
Q Q P+E + + P G AR WF+K++ SIGSF +L+RAFV F+G++ R +P +
Sbjct: 247 QLQAVPEEVMCRAFPLGLRGSARVWFNKLESESIGSFVQLSRAFVDHFIGSQRRGRPPTH 306
Query: 76 LLIVTQGRAEESEGLHQQDERLLNSIGESQPRTYVEFMTRAQRGKG-------------R 135
LL V Q E EG+ + L + + P T E M A + +
Sbjct: 307 LLSVKQMEGESLEGIRLRKGDFLYDLCKDPPETMSELMYEATKHMNAEDALEAMDDPPPK 366
Query: 136 RVEDRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKFDMYTPLTALLEQVLAAIQDTNLLK 195
R +D + E + E E P AKF +TPL ++++L IQD L+
Sbjct: 367 RRKDTEDRKPEPTKQKVPKFTETLERKRTTAPPAKFSSFTPLNTPIDKLLLQIQDDPSLR 426
Query: 196 RPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIEILIREGYLKEFV--------- 255
P K++SDPN R +N YC FH DH H T++C+ L++++E LIR+G L+++V
Sbjct: 427 WPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQVEALIRQGKLQKYVSRPAKPQAQ 486
Query: 256 -------------------------GNDRGKRALPTDQ---------------------- 315
G R R Q
Sbjct: 487 KEQTEHNRPGPIGEIRTIIGGPASGGTSRASRKAYARQVHNIMVVQRPPKNIRLDDHIIS 546
Query: 316 -EKEVAR-IHHSHNDALVVTLTSANAKVHGILIDGGSSADVLSTSAFDAMKLGRDCLKPS 375
KE AR H H+DALV+T+ A +++D GSSAD+L A+ M+L + L+P
Sbjct: 547 FSKEDARGTHQPHDDALVITINIAGFTTRRVMVDNGSSADILYLPAYQQMRLDKGKLRPM 606
BLAST of Lag0028125 vs. ExPASy TrEMBL
Match:
A0A2N9EKU0 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3233 PE=4 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 6.4e-56
Identity = 147/402 (36.57%), Postives = 207/402 (51.49%), Query Frame = 0
Query: 21 PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
P E + + P G AR WF K+ S+GSF +L+R F F+G + +P +LL V
Sbjct: 359 PDEIMCRAFPTTLKGPARIWFKKLMPSSVGSFAQLSRLFFNHFIGGQRYGRPTTHLLNVK 418
Query: 81 QGRAEESEGLHQQDERLLNSIGESQPRTYVEFMTRAQR---------------GKGRRVE 140
Q ++ E L + + P T E M AQR GK R+ +
Sbjct: 419 Q----------KEGETLRSYLTRDPPSTMTEMMYEAQRYMNGEEALLARDQATGKKRKGD 478
Query: 141 --DRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKFDMYTPLTALLEQVLAAIQDTNLLKR 200
DR HE R R +E +F+ +TPL A ++ + I++ LK
Sbjct: 479 HADRPAEPHETRPKAQRNRNGRQEERSGRGFNERFNRFTPLNAPVDHIFMQIRNDPALKW 538
Query: 201 PKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIEILIREGYLKEFV---GNDRGKR 260
P KL +DP+KR R+KYC FH DH H T+ C L+ +IE LI++G L+ F+ G R R
Sbjct: 539 PGKLLTDPDKRPRDKYCRFHRDHGHNTENCYDLKRQIEELIKQGKLQRFIEKGGTSRSSR 598
Query: 261 A-----------------------LP-TDQEKEVARIHHSHNDALVVTLTSANAKVHGIL 320
LP T E++ ++ H H+DALVVT+ A +L
Sbjct: 599 KAYARQIHNVLVTQKSNKKPRVEDLPITFTEEDACKVVHPHDDALVVTMEIAGYSTRRVL 658
Query: 321 IDGGSSADVLSTSAFDAMKLGRDCLKPSLTPLVGFRGEKVNPQGFIELSVTFGEGQQSIT 375
ID GSSAD++ +AF MK+G+D L+P TPLVGF G + P G + L + G +
Sbjct: 659 IDNGSSADIIYLTAFQQMKIGKDQLQPIETPLVGFAGTSIYPLGMVTLQIIAGTHPKQAM 718
BLAST of Lag0028125 vs. ExPASy TrEMBL
Match:
A0A2N9I9Q7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50579 PE=4 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 6.4e-56
Identity = 157/425 (36.94%), Postives = 215/425 (50.59%), Query Frame = 0
Query: 21 PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
P E + + P G AR WF KI S+GSF +L+R F F+G + +P +LL +
Sbjct: 272 PNEIMCRAFPTTLKGPARVWFKKITPSSVGSFAQLSRLFFNHFIGGQRYGRPTTHLLNIK 331
Query: 81 QGRAE-----------ESEGLHQQDERL--------------LNSIGESQPRTYVEFMTR 140
Q E E+ + D+++ L S+ + P T E M
Sbjct: 332 QKEGETLRSYLTRFNKETLLVDGADDKVVLTAFISGLQPGDFLFSVYKDPPSTMTEMMYE 391
Query: 141 AQR---------------GKGRRVE--DRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKF 200
AQR GK R+ E DR HE R R +E +F
Sbjct: 392 AQRHMNGEEALLARDHTIGKKRKGEHPDRPAESHETRPKAQRNRNRRQEDRSGRGFNERF 451
Query: 201 DMYTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRD 260
+ +TPL A ++ + I++ LK P KL +DP+KR R+KYC FH DH H T+ C L+
Sbjct: 452 NHFTPLNAPVDHIFMQIRNDPALKWPSKLLTDPDKRPRDKYCRFHRDHGHNTEDCYDLKR 511
Query: 261 EIEILIREGYLKEFVGNDRGKRA------------------------LP-TDQEKEVARI 320
+IE LI++G L+ FV +RG+R LP T E++ ++
Sbjct: 512 QIEELIKQGKLQRFV--ERGQREGRPQVASQQRPPVEKTDKKQRLEDLPITFTEEDARKV 571
Query: 321 HHSHNDALVVTLTSANAKVHGILIDGGSSADVLSTSAFDAMKLGRDCLKPSLTPLVGFRG 375
H H+DALVVTL A +LID GSSAD + +AF MK+G D L+P TPLVGF G
Sbjct: 572 LHPHDDALVVTLEIAGYSTRHVLIDNGSSADTIYLTAFQQMKIGNDQLQPIETPLVGFAG 631
BLAST of Lag0028125 vs. ExPASy TrEMBL
Match:
A0A2N9G8B9 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23694 PE=4 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 6.4e-56
Identity = 147/402 (36.57%), Postives = 207/402 (51.49%), Query Frame = 0
Query: 21 PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
P E + + P G AR WF K+ S+GSF +L+R F F+G + +P +LL V
Sbjct: 281 PDEIMCRAFPTTLKGPARIWFKKLMPSSVGSFAQLSRLFFNHFIGGQRYGRPTTHLLNVK 340
Query: 81 QGRAEESEGLHQQDERLLNSIGESQPRTYVEFMTRAQR---------------GKGRRVE 140
Q ++ E L + + P T E M AQR GK R+ +
Sbjct: 341 Q----------KEGETLRSYLTRDPPSTMTEMMYEAQRYMNGEEALLARDQATGKKRKGD 400
Query: 141 --DRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKFDMYTPLTALLEQVLAAIQDTNLLKR 200
DR HE R R +E +F+ +TPL A ++ + I++ LK
Sbjct: 401 HADRPAEPHETRPKAQRNRNGRQEERSGRGFNERFNRFTPLNAPVDHIFMQIRNDPALKW 460
Query: 201 PKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRDEIEILIREGYLKEFV---GNDRGKR 260
P KL +DP+KR R+KYC FH DH H T+ C L+ +IE LI++G L+ F+ G R R
Sbjct: 461 PGKLLTDPDKRPRDKYCRFHRDHGHNTENCYDLKRQIEELIKQGKLQRFIEKGGTSRSSR 520
Query: 261 A-----------------------LP-TDQEKEVARIHHSHNDALVVTLTSANAKVHGIL 320
LP T E++ ++ H H+DALVVT+ A +L
Sbjct: 521 KAYARQIHNVLVTQKSNKKPRVEDLPITFTEEDACKVVHPHDDALVVTMEIAGYSTRRVL 580
Query: 321 IDGGSSADVLSTSAFDAMKLGRDCLKPSLTPLVGFRGEKVNPQGFIELSVTFGEGQQSIT 375
ID GSSAD++ +AF MK+G+D L+P TPLVGF G + P G + L + G +
Sbjct: 581 IDNGSSADIIYLTAFQQMKIGKDQLQPIETPLVGFAGTSIYPLGMVTLQIIAGTHPKQAM 640
BLAST of Lag0028125 vs. ExPASy TrEMBL
Match:
A0A2N9EYR7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7874 PE=4 SV=1)
HSP 1 Score: 225.3 bits (573), Expect = 4.2e-55
Identity = 153/423 (36.17%), Postives = 215/423 (50.83%), Query Frame = 0
Query: 21 PQEFVLKPAP----GLARQWFSKIQRRSIGSFNELARAFVKQFLGARSRQKPQINLLIVT 80
P E + + P G AR WF KI S+GSF +L+R F F+GA+ +P +LL +
Sbjct: 7 PDEIMCRAFPTTLKGPARVWFKKITPGSVGSFAQLSRLFFNHFIGAQRYGRPTTHLLNIK 66
Query: 81 QGRAE-----------ESEGLHQQDERL--------------LNSIGESQPRTYVEFMTR 140
Q E E+ + D+++ L S+ + P T E M
Sbjct: 67 QKEGETLRSYLTRFNKETLLVDGADDKVVLTAFISGLQAGDFLFSVYKDPPSTMTEMMYE 126
Query: 141 AQR---------------GKGRRVE--DRGRSRHEHSSANGRGRAEAKEPHDRAKPKAKF 200
AQR GK R+ E DR HE R R +E +F
Sbjct: 127 AQRHMNGEEALLARDQTIGKKRKWEHPDRPAESHETRPKAQRNRNRRQEDRSGRGFNERF 186
Query: 201 DMYTPLTALLEQVLAAIQDTNLLKRPKKLKSDPNKRNRNKYCMFHGDHDHTTQKCIHLRD 260
+ +TPL A ++ + I++ LK P KL +DP+KR R+KYC FH DH H T+ C L+
Sbjct: 187 NHFTPLNAPVDHIFMQIRNDPALKWPGKLLTDPDKRPRDKYCRFHRDHGHNTEDCYDLKR 246
Query: 261 EIEILIREGYLKEFV------GNDRGKRA----------------LP-TDQEKEVARIHH 320
+IE LI++G L+ F+ G +G R +P T E++ ++ H
Sbjct: 247 QIEELIKQGKLQRFIERGQREGRPQGTRQQRPPVEKMDKKPRLEDIPITFGEEDARKLFH 306
Query: 321 SHNDALVVTLTSANAKVHGILIDGGSSADVLSTSAFDAMKLGRDCLKPSLTPLVGFRGEK 375
H+DALV+TL A +LID GSSAD++ +AF M++ +D L+P TPLVGF G
Sbjct: 307 PHDDALVITLEIAGYSTRRVLIDNGSSADIIYLTAFQQMRIDKDQLRPIETPLVGFAGTS 366
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9ERC7 | 7.6e-57 | 34.56 | Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5260 PE=4 SV=1 | [more] |
A0A2N9EKU0 | 6.4e-56 | 36.57 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3233 PE=4 SV=1 | [more] |
A0A2N9I9Q7 | 6.4e-56 | 36.94 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50579 PE=4 SV=1 | [more] |
A0A2N9G8B9 | 6.4e-56 | 36.57 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23694 PE=4 SV=1 | [more] |
A0A2N9EYR7 | 4.2e-55 | 36.17 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7874 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |