Lag0028076 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028076
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionSulfotransferase
Locationchr8: 12437320 .. 12437668 (-)
RNA-Seq ExpressionLag0028076
SyntenyLag0028076
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCCATGAGATCTGGCACTGTGTACAGGAACATAAGAGTCTTGGTCAGCATGTGCTTCATGTGGCAAAGGTAACGAGAGAAGGTTTCTTAAATTATGATAGTGGATACATTGACAATTATTTTCTGATATTTTGCCTCCTTATGGATGCAATTATAGTAGATGCTTGTCAATCTTACAGAAGAGGTTGGGTGCTATGTTATATGTTGGTCTAACTGCGAAACATAAGGAGTCTACAATGATGTTTGCAAACGTGGTTGGTGCACAGGTGATTTCACAACTAAGATATGCCAACTTGAGCATGGTGATGTGGAATTTCCCTACCGCAAGCCTACGGGTCAAGTAA

mRNA sequence

ATGAATCCCATGAGATCTGGCACTGTGTACAGGAACATAAGAGTCTTGGTCAGCATGTGCTTCATGTGGCAAAGATGCTTGTCAATCTTACAGAAGAGGTTGGGTGCTATGTTATATGTTGGTCTAACTGCGAAACATAAGGAGTCTACAATGATGTTTGCAAACGTGGTTGGTGCACAGGTGATTTCACAACTAAGATATGCCAACTTGAGCATGGTGATGTGGAATTTCCCTACCGCAAGCCTACGGGTCAAGTAA

Coding sequence (CDS)

ATGAATCCCATGAGATCTGGCACTGTGTACAGGAACATAAGAGTCTTGGTCAGCATGTGCTTCATGTGGCAAAGATGCTTGTCAATCTTACAGAAGAGGTTGGGTGCTATGTTATATGTTGGTCTAACTGCGAAACATAAGGAGTCTACAATGATGTTTGCAAACGTGGTTGGTGCACAGGTGATTTCACAACTAAGATATGCCAACTTGAGCATGGTGATGTGGAATTTCCCTACCGCAAGCCTACGGGTCAAGTAA

Protein sequence

MNPMRSGTVYRNIRVLVSMCFMWQRCLSILQKRLGAMLYVGLTAKHKESTMMFANVVGAQVISQLRYANLSMVMWNFPTASLRVK
Homology
[Close]
BLAST of Lag0028076 vs. NCBI nr
Match: MCI09023.1 (tyrosine sulfotransferase-like protein [Trifolium medium])

HSP 1 Score: 77.0 bits (188), Expect = 8.6e-11
Identity = 44/70 (62.86%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 4  MRSGTVYRNIRVLVSMCFMWQRC-LSILQKRLGAMLYVGLTAKHKESTMMFANVVGAQVI 63
          M+   VYRNIR LV+MC+  Q   L ILQKRL  MLYVGLT +H+ES  MFANVVG+QVI
Sbjct: 1  MKCAIVYRNIRFLVNMCYKLQSMYLYILQKRLDDMLYVGLTEEHRESATMFANVVGSQVI 60

Query: 64 SQLRYANLSM 73
          SQL   N S+
Sbjct: 61 SQLIAPNSSL 70

[Close]
BLAST of Lag0028076 vs. NCBI nr
Match: KAG7020800.1 (Protein-tyrosine sulfotransferase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-09
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 24  QRCLSILQKRLGAMLYVGLTAKHKESTMMFANVVGAQVISQLRYANLS 72
           Q  L + +KRLGAMLYVGLTA+HKES  MFANVVGAQVISQLR AN+S
Sbjct: 208 QHVLDVAKKRLGAMLYVGLTAEHKESATMFANVVGAQVISQLRNANVS 255

[Close]
BLAST of Lag0028076 vs. NCBI nr
Match: XP_022938047.1 (protein-tyrosine sulfotransferase-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-09
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 24  QRCLSILQKRLGAMLYVGLTAKHKESTMMFANVVGAQVISQLRYANLS 72
           Q  L + +KRLGAMLYVGLTA+HKES  MFANVVGAQVISQLR AN+S
Sbjct: 267 QHVLDVAKKRLGAMLYVGLTAEHKESATMFANVVGAQVISQLRNANVS 314

[Close]
BLAST of Lag0028076 vs. NCBI nr
Match: KAG6586023.1 (Protein-tyrosine sulfotransferase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-09
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 24  QRCLSILQKRLGAMLYVGLTAKHKESTMMFANVVGAQVISQLRYANLS 72
           Q  L + +KRLGAMLYVGLTA+HKES  MFANVVGAQVISQLR AN+S
Sbjct: 322 QHVLDVAKKRLGAMLYVGLTAEHKESATMFANVVGAQVISQLRNANVS 369

[Close]
BLAST of Lag0028076 vs. NCBI nr
Match: XP_022938048.1 (protein-tyrosine sulfotransferase-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-09
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 24  QRCLSILQKRLGAMLYVGLTAKHKESTMMFANVVGAQVISQLRYANLS 72
           Q  L + +KRLGAMLYVGLTA+HKES  MFANVVGAQVISQLR AN+S
Sbjct: 274 QHVLDVAKKRLGAMLYVGLTAEHKESATMFANVVGAQVISQLRNANVS 321

[Close]
BLAST of Lag0028076 vs. ExPASy Swiss-Prot
Match: Q3EDG5 (Protein-tyrosine sulfotransferase OS=Arabidopsis thaliana OX=3702 GN=TPST PE=1 SV=3)

HSP 1 Score: 52.4 bits (124), Expect = 3.0e-06
Identity = 24/43 (55.81%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 27  LSILQKRLGAMLYVGLTAKHKESTMMFANVVGAQVISQLRYAN 70
           L + ++RL +MLYVGLT +H+ES  +FANVVG+QV+SQ+  +N
Sbjct: 273 LQVAKRRLDSMLYVGLTEEHRESASLFANVVGSQVLSQVVPSN 315

The following BLAST results are available for this feature:
BLAST of Lag0028076 vs. NCBI nr
Match NameE-valueIdentityDescription
MCI09023.18.6e-1162.86tyrosine sulfotransferase-like protein [Trifolium medium][more]
KAG7020800.12.1e-0977.08Protein-tyrosine sulfotransferase, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022938047.12.1e-0977.08protein-tyrosine sulfotransferase-like isoform X2 [Cucurbita moschata][more]
KAG6586023.12.1e-0977.08Protein-tyrosine sulfotransferase, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022938048.12.1e-0977.08protein-tyrosine sulfotransferase-like isoform X3 [Cucurbita moschata][more]
BLAST of Lag0028076 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3EDG53.0e-0655.81Protein-tyrosine sulfotransferase OS=Arabidopsis thaliana OX=3702 GN=TPST PE=1 S... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028076.1Lag0028076.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055070 copper ion homeostasis
biological_process GO:0045087 innate immune response
biological_process GO:0010366 negative regulation of ethylene biosynthetic process
biological_process GO:0010468 regulation of gene expression
biological_process GO:0010082 regulation of root meristem growth
biological_process GO:0009733 response to auxin
biological_process GO:0019827 stem cell population maintenance
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008476 protein-tyrosine sulfotransferase activity