Lag0027987 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGAGTATTTGGCCATTATGAAACATGCATTCGATAATCTGCAACTTGCACGTAATCCTATCTCCATGGGTGGGCTTGATTCAAACTATATTCTGATAGTGTGCTCAATCGAGGATAAAGATATCACAACTTGGCAAGAACTATCTTTCATCCTGATTCAGTTTGAAGGGACTCTTGCTCGCTACAGTGTCATCACCAACACTAAAGACCTACCTGATCTTGTTGCACATCTTGTGTATAGTCATCAAAATCAAGCGTCTGGGAAAAAATTCTTCAACCCTAATCGAGGTAATTCAAATCAAGGCATCAACCGACAAAACTTCTCCAATAGTCGAGGCTCCAACAGGGGAAGAAGTTGAGGCCGAGGAGGTTTTTAGAGGACCAACTTTCCAACTCTATGGAAAATACGGTCATGCTCCTTATTGTTACTCTTGGTTTGAGGAACAATTTAATAACCCTTATGCTGCTAGCTACAGTAACAACCAAGGATGAAACACGACTACTTCCTCAGCTTATATTGCAACGCCAGAGGTTTTGAATGATCCTAAATGGCTAGCCAACAGTGGAGCTACGAATCATGTAACCGCGAATGCTGGAAACTTAGCCCTGAAAAATGAGTATAATGGAACCAAATTAAATATTGATCATGTTGGTAGTAGTTTTGTTACCTGTGATTCTAGAAATTATAAGCTGATTAAGTTGAATAACATGCTGACGGATTGGAATTCCTAA ATGGGGGAGTATTTGGCCATTATGAAACATGCATTCGATAATCTGCAACTTGCACGTAATCCTATCTCCATGGGTGGGCTTGATTCAAACTATATTCTGATAGTGTGCTCAATCGAGGATAAAGATATCACAACTTGGCAAGAACTATCTTTCATCCTGATTCAGTTTGAAGGGACTCTTGCTCGCTACAGTGTCATCACCAACACTAAAGACCTACCTGATCTTGTTGCACATCTTGTGTATAGTCATCAAAATCAAGCGTCTGGGAAAAAATTCTTCAACCCTAATCGAGCTTATATTGCAACGCCAGAGGTTTTGAATGATCCTAAATGGCTAGCCAACAGTGGAGCTACGAATCATGTAACCGCGAATGCTGGAAACTTAGCCCTGAAAAATGAGTATAATGGAACCAAATTAAATATTGATCATGTTGGTAGTAGTTTTGTTACCTGTGATTCTAGAAATTATAAGCTGATTAAGTTGAATAACATGCTGACGGATTGGAATTCCTAA ATGGGGGAGTATTTGGCCATTATGAAACATGCATTCGATAATCTGCAACTTGCACGTAATCCTATCTCCATGGGTGGGCTTGATTCAAACTATATTCTGATAGTGTGCTCAATCGAGGATAAAGATATCACAACTTGGCAAGAACTATCTTTCATCCTGATTCAGTTTGAAGGGACTCTTGCTCGCTACAGTGTCATCACCAACACTAAAGACCTACCTGATCTTGTTGCACATCTTGTGTATAGTCATCAAAATCAAGCGTCTGGGAAAAAATTCTTCAACCCTAATCGAGCTTATATTGCAACGCCAGAGGTTTTGAATGATCCTAAATGGCTAGCCAACAGTGGAGCTACGAATCATGTAACCGCGAATGCTGGAAACTTAGCCCTGAAAAATGAGTATAATGGAACCAAATTAAATATTGATCATGTTGGTAGTAGTTTTGTTACCTGTGATTCTAGAAATTATAAGCTGATTAAGTTGAATAACATGCTGACGGATTGGAATTCCTAA MGEYLAIMKHAFDNLQLARNPISMGGLDSNYILIVCSIEDKDITTWQELSFILIQFEGTLARYSVITNTKDLPDLVAHLVYSHQNQASGKKFFNPNRAYIATPEVLNDPKWLANSGATNHVTANAGNLALKNEYNGTKLNIDHVGSSFVTCDSRNYKLIKLNNMLTDWNS Homology
BLAST of Lag0027987 vs. NCBI nr
Match: XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]) HSP 1 Score: 95.5 bits (236), Expect = 4.7e-16 Identity = 62/217 (28.57%), Postives = 95/217 (43.78%), Query Frame = 0
BLAST of Lag0027987 vs. NCBI nr
Match: XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]) HSP 1 Score: 95.5 bits (236), Expect = 4.7e-16 Identity = 62/217 (28.57%), Postives = 95/217 (43.78%), Query Frame = 0
BLAST of Lag0027987 vs. NCBI nr
Match: XP_022142770.1 (uncharacterized protein LOC111012809 [Momordica charantia]) HSP 1 Score: 73.6 bits (179), Expect = 1.9e-09 Identity = 64/228 (28.07%), Postives = 88/228 (38.60%), Query Frame = 0
BLAST of Lag0027987 vs. NCBI nr
Match: TXG69253.1 (hypothetical protein EZV62_004188 [Acer yangbiense]) HSP 1 Score: 71.2 bits (173), Expect = 9.4e-09 Identity = 65/235 (27.66%), Postives = 95/235 (40.43%), Query Frame = 0
BLAST of Lag0027987 vs. NCBI nr
Match: TXG67243.1 (hypothetical protein EZV62_008518 [Acer yangbiense]) HSP 1 Score: 69.3 bits (168), Expect = 3.6e-08 Identity = 64/235 (27.23%), Postives = 95/235 (40.43%), Query Frame = 0
BLAST of Lag0027987 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 5.6e-04 Identity = 33/105 (31.43%), Postives = 48/105 (45.71%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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