Lag0027963 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027963
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	GOLD domain-containing protein
Location	chr8: 8736200 .. 8736682 (-)
RNA-Seq Expression	Lag0027963
Synteny	Lag0027963

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAAGCAGTTGAAAGAGAATCAAGAACCAGTAATCTCCGGCACCGGCGACCGAGAGTTTCCGGCGGAGGAGTCGACGATGACGATTTGTAATCCTTGTGAATTTCACTCTCCGAAGGCGTACAAGGAAGTGGAAACGGATCAGGAAAGTATAGGATCGTCGGAGGAAACAGAGTCGCCGAAATCAGTTGCAAAGGTTGCGGACTGGAGGAAGAAATTGGCGTATGTTCATTACCAGATTCGGAGAATCAGAGAGGAGGATTTGCATCTTGGCGAGGATATCGGCGAAGGCTTCAACGCGAAAGAGAAGATGAATTCGATCGGAGATTGGTGCGATGTTGGACATCAATGTAATCATCACCATAATCCTCCTCATTCTTATCATAATCGCGTTAGTTCTCAGATGAATGTTGTAATTTTCTCGAGGCCGATCTTGCCGAGCTCGCCGCTCAGCGGGAAGAACGCACAGTTAGGGCTTTAA

mRNA sequence

ATGACGAAGCAGTTGAAAGAGAATCAAGAACCAGTAATCTCCGGCACCGGCGACCGAGAGTTTCCGGCGGAGGAGTCGACGATGACGATTTGTAATCCTTGTGAATTTCACTCTCCGAAGGCGTACAAGGAAGTGGAAACGGATCAGGAAAGTATAGGATCGTCGGAGGAAACAGAGTCGCCGAAATCAGTTGCAAAGGTTGCGGACTGGAGGAAGAAATTGGCGTATGTTCATTACCAGATTCGGAGAATCAGAGAGGAGGATTTGCATCTTGGCGAGGATATCGGCGAAGGCTTCAACGCGAAAGAGAAGATGAATTCGATCGGAGATTGGTGCGATGTTGGACATCAATGTAATCATCACCATAATCCTCCTCATTCTTATCATAATCGCGTTAGTTCTCAGATGAATGTTGTAATTTTCTCGAGGCCGATCTTGCCGAGCTCGCCGCTCAGCGGGAAGAACGCACAGTTAGGGCTTTAA

Coding sequence (CDS)

ATGACGAAGCAGTTGAAAGAGAATCAAGAACCAGTAATCTCCGGCACCGGCGACCGAGAGTTTCCGGCGGAGGAGTCGACGATGACGATTTGTAATCCTTGTGAATTTCACTCTCCGAAGGCGTACAAGGAAGTGGAAACGGATCAGGAAAGTATAGGATCGTCGGAGGAAACAGAGTCGCCGAAATCAGTTGCAAAGGTTGCGGACTGGAGGAAGAAATTGGCGTATGTTCATTACCAGATTCGGAGAATCAGAGAGGAGGATTTGCATCTTGGCGAGGATATCGGCGAAGGCTTCAACGCGAAAGAGAAGATGAATTCGATCGGAGATTGGTGCGATGTTGGACATCAATGTAATCATCACCATAATCCTCCTCATTCTTATCATAATCGCGTTAGTTCTCAGATGAATGTTGTAATTTTCTCGAGGCCGATCTTGCCGAGCTCGCCGCTCAGCGGGAAGAACGCACAGTTAGGGCTTTAA

Protein sequence

MTKQLKENQEPVISGTGDREFPAEESTMTICNPCEFHSPKAYKEVETDQESIGSSEETESPKSVAKVADWRKKLAYVHYQIRRIREEDLHLGEDIGEGFNAKEKMNSIGDWCDVGHQCNHHHNPPHSYHNRVSSQMNVVIFSRPILPSSPLSGKNAQLGL

Homology

[Close]

BLAST of Lag0027963 vs. NCBI nr
Match: XP_022934173.1 (uncharacterized protein LOC111441419 [Cucurbita moschata])

HSP 1 Score: 260.8 bits (665), Expect = 7.9e-66
Identity = 134/158 (84.81%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MTKQLKENQEPVISGTGDREFP--AEESTMTICNPCEFHSPKAYKEVETDQESIGSSEET 60
           MTKQLKENQEP ISGTG+ EFP  A ES  +ICNPC+FHS K  KE ETDQESIGSSEET
Sbjct: 1   MTKQLKENQEPFISGTGEDEFPAAAPESMRSICNPCDFHSSKTCKEEETDQESIGSSEET 60

Query: 61  ESPKSVAKVADWRKKLAYVHYQIRRIREEDLHLGEDIGEGFNAKEKMNSIGDWCDVGHQC 120
           ESPKSVAKVADWRKK+AYVHYQIRRIREEDLHLGEDIGEGFNAKEK+NSIGDWCDV    
Sbjct: 61  ESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSIGDWCDV---- 120

Query: 121 NHHHNPPHSYHN-RVSSQMNVVIFSRPILPSSPLSGKN 156
              HNPPHSYHN RVSSQMNVVIFSRPILPSSPLSGKN
Sbjct: 121 --RHNPPHSYHNDRVSSQMNVVIFSRPILPSSPLSGKN 152

[Close]

BLAST of Lag0027963 vs. NCBI nr
Match: KAG7017711.1 (hypothetical protein SDJN02_19577, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.4 bits (664), Expect = 1.0e-65
Identity = 133/158 (84.18%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MTKQLKENQEPVISGTGDREFP--AEESTMTICNPCEFHSPKAYKEVETDQESIGSSEET 60
           MTKQLKENQEP ISGTG+ EFP  A ES  +ICNPC+FHS K  KE ETDQESIGSSEET
Sbjct: 1   MTKQLKENQEPFISGTGEDEFPAAAPESMRSICNPCDFHSSKTCKEEETDQESIGSSEET 60

Query: 61  ESPKSVAKVADWRKKLAYVHYQIRRIREEDLHLGEDIGEGFNAKEKMNSIGDWCDVGHQC 120
           ESPKSVAK+ADWRKK+AYVHYQIRRIREEDLHLGEDIGEGFNAKEK+NSIGDWCDV    
Sbjct: 61  ESPKSVAKIADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSIGDWCDV---- 120

Query: 121 NHHHNPPHSYHN-RVSSQMNVVIFSRPILPSSPLSGKN 156
              HNPPHSYHN RVSSQMNVVIFSRPILPSSPLSGKN
Sbjct: 121 --RHNPPHSYHNDRVSSQMNVVIFSRPILPSSPLSGKN 152

[Close]

BLAST of Lag0027963 vs. NCBI nr
Match: KAE8651222.1 (hypothetical protein Csa_001107 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.7e-60
Identity = 128/158 (81.01%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 1   MTKQLKENQEPVISGTGDREFPAEESTMTICNPCEFHSPKAYKEVETDQESIGSSEETES 60
           MTKQLKENQEP+ISG        EES  +ICNPC+FH+PK YKEVETDQESIGSSEETES
Sbjct: 1   MTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEETES 60

Query: 61  PKSVAKVADWRKKLAYVHYQIRRIREEDLHLGEDIGEGFNAKEKMNSI-GDWCDVGHQCN 120
           PKSVAKVADWRKKLAYVHYQ+RRIREEDLHLGEDIGEGFNAKEK+NSI GDWCDV H  N
Sbjct: 61  PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPH--N 120

Query: 121 HHHNPPH-SYHN-RVSSQMNVVIFSRPILPSSPLSGKN 156
           +   PPH S+HN RV SQMNVVIFSRPILPSSPL GKN
Sbjct: 121 NPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKN 156

[Close]

BLAST of Lag0027963 vs. NCBI nr
Match: XP_011652239.2 (uncharacterized protein LOC105435002 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.7e-60
Identity = 128/158 (81.01%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 1   MTKQLKENQEPVISGTGDREFPAEESTMTICNPCEFHSPKAYKEVETDQESIGSSEETES 60
           MTKQLKENQEP+ISG        EES  +ICNPC+FH+PK YKEVETDQESIGSSEETES
Sbjct: 23  MTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEETES 82

Query: 61  PKSVAKVADWRKKLAYVHYQIRRIREEDLHLGEDIGEGFNAKEKMNSI-GDWCDVGHQCN 120
           PKSVAKVADWRKKLAYVHYQ+RRIREEDLHLGEDIGEGFNAKEK+NSI GDWCDV H  N
Sbjct: 83  PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPH--N 142

Query: 121 HHHNPPH-SYHN-RVSSQMNVVIFSRPILPSSPLSGKN 156
           +   PPH S+HN RV SQMNVVIFSRPILPSSPL GKN
Sbjct: 143 NPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKN 178

[Close]

BLAST of Lag0027963 vs. NCBI nr
Match: XP_008443420.1 (PREDICTED: uncharacterized protein LOC103487011 [Cucumis melo] >KAA0053752.1 uncharacterized protein E6C27_scaffold135G001310 [Cucumis melo var. makuwa] >TYK25651.1 uncharacterized protein E5676_scaffold352G008140 [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 8.5e-60
Identity = 129/161 (80.12%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 1   MTKQLKENQEPVISGTGDREFP---AEESTMTICNPCEFHSPKAYKEVETDQESIGSSEE 60
           MTKQLKENQEP++SG    EFP   AEES   ICNPC+FH+PK YKEVETDQESIGSSEE
Sbjct: 1   MTKQLKENQEPLVSG---GEFPATEAEESMRLICNPCDFHTPKTYKEVETDQESIGSSEE 60

Query: 61  TESPKSVAKVADWRKKLAYVHYQIRRIREEDLHLGEDIGEGFNAKEKMNSI-GDWCDVGH 120
           TESPKSVAKVADWRKKLAYVHYQ+RRIREEDLHLGEDIGEGFNAKEK+NSI GDWCDV  
Sbjct: 61  TESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVR- 120

Query: 121 QCNHHHNPPH-SYHN-RVSSQMNVVIFSRPILPSSPLSGKN 156
             ++++ PPH S+HN RV SQMNVVIFSRPILPSSPL GKN
Sbjct: 121 --DNNNPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKN 155

The following BLAST results are available for this feature:

BLAST of Lag0027963 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934173.1	7.9e-66	84.81	uncharacterized protein LOC111441419 [Cucurbita moschata]	[more]
KAG7017711.1	1.0e-65	84.18	hypothetical protein SDJN02_19577, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAE8651222.1	1.7e-60	81.01	hypothetical protein Csa_001107 [Cucumis sativus]	[more]
XP_011652239.2	1.7e-60	81.01	uncharacterized protein LOC105435002 [Cucumis sativus]	[more]
XP_008443420.1	8.5e-60	80.12	PREDICTED: uncharacterized protein LOC103487011 [Cucumis melo] >KAA0053752.1 unc...	[more]

BLAST of Lag0027963 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027963.1	Lag0027963.1	mRNA