Lag0027959 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027959
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ribonuclease H
Location	chr8: 8713756 .. 8715380 (+)
RNA-Seq Expression	Lag0027959
Synteny	Lag0027959

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCAAGAAAGCTGCTTCCAAGACTTCAAGCGACTTGTACATGGGACCAATTACTCGTGGACGCTCCAAGGAAATTCAAAAGTTAGAAGAAGAACAAGCCTCTGTCATTTAAATATGATATGGACCCAGATGGCAGAGCCAAATCAAGGTGGAATGGTCATCCAAGAAAATCCTTTATTTGACTATTCTACTTCATCTTCTGAGCAGGCAAAGGAGACATCAGATCCTGATGTGATGTCTGTAATGATGGATGACATAGGTACAGGCGAAGAAAGAATGGTGAACTGGAAAGGAAGGTCAACATGCTGATGAAGGCGGTTGAAGAGAGAGATTGTGAAATTGCCTCTCTAAAAAATCACATTGAAAGTCGTGATATCGCTGAATCAAGCCAAACACCCGCTGTAAAGGTTAATGACAAAGGGAAGGCTGTCATGCAAGAAAATCAACCTCAGCATACCACTTCAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTCTAATAATCAGGAAAGCAAGGTATCTCCTAGCCAAACTGAGAAGATACTATGTTCAGAAGAGAAGAAGACAAATGCTCCTGTCTTGCGCTATGTTCCCTTATCTCGACCCAAGAAGGGTGATTCGCCATTTGCAGAATGCTCCAATAATTTAAGAGTTGGCGACATTGAAATTTTGAAAGAGAATTTTATCACACCTCTTACAAAGATATCCAAACAAAAGGTCAAAGACAAACAAGTAAAAGCAACTCTGCCTGATAGACGAACAAAAGAGGGGTTTGATCCTAAAGCATACAAACTCTTGGCAAAGGCAGGTTATGATTTCACAGCGCATACTGAGTTCAAAAGTTTACGGATCTTTGACCAAAGGCCTGAACTTTCCTCAACACAGAAGAAACTTCAAAAAGAGGGTTATGTTATACCCATTTCAAGAGCTGGTCTTGGATATAAATCTCCTGAGCCGGTTCGAATCACAAGAAAAGGGAAAGCGAAAGTTGCAGATACACTTCACATTACAGTGGAAGAAATCGATGATTCCGAACAGGCTAAAGAAGACGAAATAGATCATAGAACTTCTGCATTTGATCGCATTGGACTGTCGGTTACACGATCCTCAGTTTTTCAAAGACTGAGTACAGCTGCAATAGAAGATGAAAGTCAGCATCCAACTTATGGCTCCACACGACCTTCGGCCTTCCAAAGGCTGAGTATGGCTTCTGAGGAAAAAGGGAGTGTCAATTCAACCCTTACTACACGACTATCAGCTTTCCAAAGGTTGAGCGTAGCCACAAAAAGGAGTAAAGAATGGTCCCCTATATCAGTTTCTAACATAACAGAAACTTCAAGCAAGACAAAGGGTGATGAGAAAATTCGTAGCGCGGTCCCCTCACGAATGAAGATAAAATTGCTTGTTTCTATAAATGCAGAAGGTTCATTAAAAATAAAGCGACATGATGTTATTATCACAAGATCGAAAGAGAAAATCCCTGATGATGAAAAGACAAAGTCGTATGCTACAACATCACCACAGAGAGGAAGAAACAAATCCTGA

mRNA sequence

ATGGCATCCAAGAAAGCTGCTTCCAAGACTTCAAGCGACTTGTACATGGGACCAATTACTCGTGGACGCTCCAAGGAAATTCAAAAGTACAGGCGAAGAAAGAATGGTGAACTGGAAAGGAAGGTCAACATGCTGATGAAGGCGGTTGAAGAGAGAGATTGTGAAATTGCCTCTCTAAAAAATCACATTGAAAGTCGTGATATCGCTGAATCAAGCCAAACACCCGCTGTAAAGGAAAGCAAGGTATCTCCTAGCCAAACTGAGAAGATACTATGTTCAGAAGAGAAGAAGACAAATGCTCCTGTCTTGCGCTATGTTCCCTTATCTCGACCCAAGAAGGGTGATTCGCCATTTGCAGAATGCTCCAATAATTTAAGAGTTGGCGACATTGAAATTTTGAAAGAGAATTTTATCACACCTCTTACAAAGATATCCAAACAAAAGGTCAAAGACAAACAAGTAAAAGCAACTCTGCCTGATAGACGAACAAAAGAGGGGTTTGATCCTAAAGCATACAAACTCTTGGCAAAGGCAGGTTATGATTTCACAGCGCATACTGAGTTCAAAAGTTTACGGATCTTTGACCAAAGGCCTGAACTTTCCTCAACACAGAAGAAACTTCAAAAAGAGGGTTATGTTATACCCATTTCAAGAGCTGGTCTTGGATATAAATCTCCTGAGCCGGTTCGAATCACAAGAAAAGGGAAAGCGAAAGTTGCAGATACACTTCACATTACAGTGGAAGAAATCGATGATTCCGAACAGGCTAAAGAAGACGAAATAGATCATAGAACTTCTGCATTTGATCGCATTGGACTGTCGGTTACACGATCCTCAGTTTTTCAAAGACTGAGTACAGCTGCAATAGAAGATGAAAGTCAGCATCCAACTTATGGCTCCACACGACCTTCGGCCTTCCAAAGGCTGAGTATGGCTTCTGAGGAAAAAGGGAGTGTCAATTCAACCCTTACTACACGACTATCAGCTTTCCAAAGGTTGAGCGTAGCCACAAAAAGGAGTAAAGAATGGTCCCCTATATCAGTTTCTAACATAACAGAAACTTCAAGCAAGACAAAGGGTGATGAGAAAATTCGTAGCGCGGTCCCCTCACGAATGAAGATAAAATTGCTTGTTTCTATAAATGCAGAAGGTTCATTAAAAATAAAGCGACATGATGTTATTATCACAAGATCGAAAGAGAAAATCCCTGATGATGAAAAGACAAAGTCGTATGCTACAACATCACCACAGAGAGGAAGAAACAAATCCTGA

Coding sequence (CDS)

ATGGCATCCAAGAAAGCTGCTTCCAAGACTTCAAGCGACTTGTACATGGGACCAATTACTCGTGGACGCTCCAAGGAAATTCAAAAGTACAGGCGAAGAAAGAATGGTGAACTGGAAAGGAAGGTCAACATGCTGATGAAGGCGGTTGAAGAGAGAGATTGTGAAATTGCCTCTCTAAAAAATCACATTGAAAGTCGTGATATCGCTGAATCAAGCCAAACACCCGCTGTAAAGGAAAGCAAGGTATCTCCTAGCCAAACTGAGAAGATACTATGTTCAGAAGAGAAGAAGACAAATGCTCCTGTCTTGCGCTATGTTCCCTTATCTCGACCCAAGAAGGGTGATTCGCCATTTGCAGAATGCTCCAATAATTTAAGAGTTGGCGACATTGAAATTTTGAAAGAGAATTTTATCACACCTCTTACAAAGATATCCAAACAAAAGGTCAAAGACAAACAAGTAAAAGCAACTCTGCCTGATAGACGAACAAAAGAGGGGTTTGATCCTAAAGCATACAAACTCTTGGCAAAGGCAGGTTATGATTTCACAGCGCATACTGAGTTCAAAAGTTTACGGATCTTTGACCAAAGGCCTGAACTTTCCTCAACACAGAAGAAACTTCAAAAAGAGGGTTATGTTATACCCATTTCAAGAGCTGGTCTTGGATATAAATCTCCTGAGCCGGTTCGAATCACAAGAAAAGGGAAAGCGAAAGTTGCAGATACACTTCACATTACAGTGGAAGAAATCGATGATTCCGAACAGGCTAAAGAAGACGAAATAGATCATAGAACTTCTGCATTTGATCGCATTGGACTGTCGGTTACACGATCCTCAGTTTTTCAAAGACTGAGTACAGCTGCAATAGAAGATGAAAGTCAGCATCCAACTTATGGCTCCACACGACCTTCGGCCTTCCAAAGGCTGAGTATGGCTTCTGAGGAAAAAGGGAGTGTCAATTCAACCCTTACTACACGACTATCAGCTTTCCAAAGGTTGAGCGTAGCCACAAAAAGGAGTAAAGAATGGTCCCCTATATCAGTTTCTAACATAACAGAAACTTCAAGCAAGACAAAGGGTGATGAGAAAATTCGTAGCGCGGTCCCCTCACGAATGAAGATAAAATTGCTTGTTTCTATAAATGCAGAAGGTTCATTAAAAATAAAGCGACATGATGTTATTATCACAAGATCGAAAGAGAAAATCCCTGATGATGAAAAGACAAAGTCGTATGCTACAACATCACCACAGAGAGGAAGAAACAAATCCTGA

Protein sequence

MASKKAASKTSSDLYMGPITRGRSKEIQKYRRRKNGELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAVKESKVSPSQTEKILCSEEKKTNAPVLRYVPLSRPKKGDSPFAECSNNLRVGDIEILKENFITPLTKISKQKVKDKQVKATLPDRRTKEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFDQRPELSSTQKKLQKEGYVIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSAFDRIGLSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKGSVNSTLTTRLSAFQRLSVATKRSKEWSPISVSNITETSSKTKGDEKIRSAVPSRMKIKLLVSINAEGSLKIKRHDVIITRSKEKIPDDEKTKSYATTSPQRGRNKS

Homology

[Close]

BLAST of Lag0027959 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 356.3 bits (913), Expect = 3.7e-94
Identity = 197/331 (59.52%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 79   ESKVSPSQTEKILCSEEKKTNAPVLRYVPLSRPKKGDSPFAECSNNLRVGDIEILKENFI 138
            E+K+   + EKI   +++ +N PVLRY+PLSR KKG+SPF ECS NL V + EILKENF 
Sbjct: 907  ETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFT 966

Query: 139  TPLTKISK---QKVKDKQVKATLPDRRTKEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFD 198
             PLTKI K   +K++ K ++A LP+RRT EGFDPKAYKL+AKAGYDFT  TE KS++IFD
Sbjct: 967  APLTKIEKGEAKKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFD 1026

Query: 199  QRPELSSTQKKLQKEGYVIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQ 258
            +RPELS TQKKLQK+GY IP SRAG+GY+S EPVRIT KGKAKVA+T HITVEE  DSE+
Sbjct: 1027 ERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEE 1086

Query: 259  AKEDEIDHRTSAFDRIGLSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEE 318
             K+     R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++
Sbjct: 1087 GKKVR-SQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKK 1146

Query: 319  KGSVNSTLTTRLSAFQRLSVATKRSKEWSPISVSNITETSSKTKGDEKIRSAVPSRMKIK 378
              S++ T TTR SAF+RLSV+  R ++ + +SVSN    SS   GDE+IRSA PSRMK K
Sbjct: 1147 VRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSN---KSSLVTGDEEIRSAFPSRMKRK 1206

Query: 379  LLVSINAEGSLKIKRHDVIITRSKEKIPDDE 407
            + VS+N EGSLK+KRHDV+ TR ++  P+DE
Sbjct: 1207 MFVSVNTEGSLKVKRHDVVFTRPEDNEPEDE 1233

[Close]

BLAST of Lag0027959 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-04
Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 38  LERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAVKES 81
           LE+KVNM MKAVEERD EIA LKNHIESRD AESS T  +K +
Sbjct: 99  LEKKVNMHMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNA 141

HSP 2 Score: 356.3 bits (913), Expect = 3.7e-94
Identity = 197/331 (59.52%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 79   ESKVSPSQTEKILCSEEKKTNAPVLRYVPLSRPKKGDSPFAECSNNLRVGDIEILKENFI 138
            E+K+   + EKI   +++ +N PVLRY+PLSR KKG+SPF ECS NL V + EILKENF 
Sbjct: 929  ETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFT 988

Query: 139  TPLTKISK---QKVKDKQVKATLPDRRTKEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFD 198
             PLTKI K   +K++ K ++A LP+RRT EGFDPKAYKL+AKAGYDFT  TE KS++IFD
Sbjct: 989  APLTKIEKGEAKKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFD 1048

Query: 199  QRPELSSTQKKLQKEGYVIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQ 258
            +RPELS TQKKLQK+GY IP SRAG+GY+S EPVRIT KGKAKVA+T HITVEE  DSE+
Sbjct: 1049 ERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEE 1108

Query: 259  AKEDEIDHRTSAFDRIGLSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEE 318
             K+     R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++
Sbjct: 1109 GKKVR-SQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKK 1168

Query: 319  KGSVNSTLTTRLSAFQRLSVATKRSKEWSPISVSNITETSSKTKGDEKIRSAVPSRMKIK 378
              S++ T TTR SAF+RLSV+  R ++ + +SVSN    SS   GDE+IRSA PSRMK K
Sbjct: 1169 VRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSN---KSSLVTGDEEIRSAFPSRMKRK 1228

Query: 379  LLVSINAEGSLKIKRHDVIITRSKEKIPDDE 407
            + VS+N EGSLK+KRHDV+ TR ++  P+DE
Sbjct: 1229 MFVSVNTEGSLKVKRHDVVFTRPEDNEPEDE 1255

[Close]

BLAST of Lag0027959 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 6.4e-06
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 37  ELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAVKES 81
           ELE+KVNMLMKAVEERD EIA LKNHIESRD AESS T  +K +
Sbjct: 98  ELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNA 141

HSP 2 Score: 356.3 bits (913), Expect = 3.7e-94
Identity = 197/331 (59.52%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 79   ESKVSPSQTEKILCSEEKKTNAPVLRYVPLSRPKKGDSPFAECSNNLRVGDIEILKENFI 138
            E+K+   + EKI   +++ +N PVLRY+PLSR KKG+SPF ECS NL V + EILKENF 
Sbjct: 859  ETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFT 918

Query: 139  TPLTKISK---QKVKDKQVKATLPDRRTKEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFD 198
             PLTKI K   +K++ K ++A LP+RRT EGFDPKAYKL+AKAGYDFT  TE KS++IFD
Sbjct: 919  APLTKIEKGEAKKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFD 978

Query: 199  QRPELSSTQKKLQKEGYVIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQ 258
            +RPELS TQKKLQK+GY IP SRAG+GY+S EPVRIT KGKAKVA+T HITVEE  DSE+
Sbjct: 979  ERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEE 1038

Query: 259  AKEDEIDHRTSAFDRIGLSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEE 318
             K+     R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++
Sbjct: 1039 GKKVR-SQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKK 1098

Query: 319  KGSVNSTLTTRLSAFQRLSVATKRSKEWSPISVSNITETSSKTKGDEKIRSAVPSRMKIK 378
              S++ T TTR SAF+RLSV+  R ++ + +SVSN    SS   GDE+IRSA PSRMK K
Sbjct: 1099 VRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSN---KSSLVTGDEEIRSAFPSRMKRK 1158

Query: 379  LLVSINAEGSLKIKRHDVIITRSKEKIPDDE 407
            + VS+N EGSLK+KRHDV+ TR ++  P+DE
Sbjct: 1159 MFVSVNTEGSLKVKRHDVVFTRPEDNEPEDE 1185

[Close]

BLAST of Lag0027959 vs. NCBI nr
Match: TYK18071.1 (uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 7.1e-05
Identity = 32/42 (76.19%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 37  ELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAVK 79
           ELE+KVNMLMKAVEERD  IA  KNHIESRD AESS T  +K
Sbjct: 98  ELEKKVNMLMKAVEERDFVIALFKNHIESRDAAESSHTQTIK 139

HSP 2 Score: 352.8 bits (904), Expect = 4.0e-93
Identity = 198/363 (54.55%), Postives = 258/363 (71.07%), Query Frame = 0


Query: 47  KAVEERDCEIASLKNHIESRDIAESSQTPAVKESKVSPSQTEKILCSEEKKTNAPVLRYV 106
           K   + + E+ + K   +   +       +  E+K+   + EKI   +++ +N PVLRY+
Sbjct: 251 KGTFKNEQEMITSKKSNKGNTLNSQQNGESTTETKLRAPEAEKIATLQKEVSNPPVLRYI 310

Query: 107 PLSRPKKGDSPFAECSNNLRVGDIEILKENFITPLTKISK---QKVKDKQVKATLPDRRT 166
           PLSR KKG+SPFAECS N  V + EILKENF  PLTKI K   +K++ K+++A LP+RRT
Sbjct: 311 PLSRRKKGESPFAECSKNPTVKNTEILKENFTPPLTKIEKGEAKKIEKKELEAYLPERRT 370

Query: 167 KEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFDQRPELSSTQKKLQKEGYVIPISRAGLGY 226
            EGFDPKAYKL+AKAGYDFT  TE KS++IFD+RPELS TQKKLQK+GY IP SRAG+GY
Sbjct: 371 VEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGY 430

Query: 227 KSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSAFDRIGLSVTRSSVFQR 286
           +S EP+RIT KGKAKV +T HITVEE  DS++ K+D    R+S FDRI  S  R SVFQR
Sbjct: 431 QSSEPIRITGKGKAKVTNTCHITVEESKDSKEGKKDR-SQRSSVFDRIAFSAIRPSVFQR 490

Query: 287 LSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKGSVNSTLTTRLSAFQRLSVATKRSKEW 346
           +ST+  +D +Q  T  STR SAFQRL+  +++  S++ T TTR SAF+RLSV   + ++ 
Sbjct: 491 VSTSIAKDSNQVSTCSSTRLSAFQRLNTNAKKVQSISPTSTTRKSAFKRLSVLVTKGQKK 550

Query: 347 SPISVSNITETSSKTKGDEKIRSAVPSRMKIKLLVSINAEGSLKIKRHDVIITRSKEKIP 406
           + ISVSN    SS   GDE+IRSA PSRMK K+ VS+N EGSLK+KRHDV+ TR ++  P
Sbjct: 551 ASISVSN---KSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEP 609

[Close]

BLAST of Lag0027959 vs. NCBI nr
Match: TYK06199.1 (uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 350.5 bits (898), Expect = 2.0e-92
Identity = 194/331 (58.61%), Postives = 246/331 (74.32%), Query Frame = 0


Query: 79   ESKVSPSQTEKILCSEEKKTNAPVLRYVPLSRPKKGDSPFAECSNNLRVGDIEILKENFI 138
            E+K+   + EKI   +++ +N PVL Y+P SR KKG+SPFAEC  NL V + EILKENF 
Sbjct: 684  ETKLRAPEAEKIATLQKEVSNLPVLCYIPFSRHKKGESPFAECLKNLTVKNTEILKENFT 743

Query: 139  TPLTKISK---QKVKDKQVKATLPDRRTKEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFD 198
             PLTKI K   +K++ K ++A LP+RRT +GFDPKAYKL+AKAGYDFT  TE KS++IFD
Sbjct: 744  APLTKIEKGEAKKIEKKDLEAYLPERRTVKGFDPKAYKLMAKAGYDFTTRTELKSVKIFD 803

Query: 199  QRPELSSTQKKLQKEGYVIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQ 258
            +RPELS TQKKLQK+GY IP SRAG+GY S EPVRIT KGK KVA+T HITVEE  DSE+
Sbjct: 804  ERPELSPTQKKLQKQGYSIPNSRAGIGYHSSEPVRITGKGKVKVANTCHITVEESKDSEE 863

Query: 259  AKEDEIDHRTSAFDRIGLSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEE 318
             K+D    R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++
Sbjct: 864  GKKDR-SQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKK 923

Query: 319  KGSVNSTLTTRLSAFQRLSVATKRSKEWSPISVSNITETSSKTKGDEKIRSAVPSRMKIK 378
              S++ T TTR SAF+RLSV+  R ++ + +SVSN    SS   GDE+IRSA PSRMK K
Sbjct: 924  VRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSN---KSSLVTGDEEIRSAFPSRMKRK 983

Query: 379  LLVSINAEGSLKIKRHDVIITRSKEKIPDDE 407
            + VS+N EGSLK+KRHDV+ TR ++  P+DE
Sbjct: 984  MFVSVNTEGSLKVKRHDVVFTRPEDNEPEDE 1010

[Close]

BLAST of Lag0027959 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.8e-94
Identity = 197/331 (59.52%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 79   ESKVSPSQTEKILCSEEKKTNAPVLRYVPLSRPKKGDSPFAECSNNLRVGDIEILKENFI 138
            E+K+   + EKI   +++ +N PVLRY+PLSR KKG+SPF ECS NL V + EILKENF 
Sbjct: 929  ETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFT 988

Query: 139  TPLTKISK---QKVKDKQVKATLPDRRTKEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFD 198
             PLTKI K   +K++ K ++A LP+RRT EGFDPKAYKL+AKAGYDFT  TE KS++IFD
Sbjct: 989  APLTKIEKGEAKKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFD 1048

Query: 199  QRPELSSTQKKLQKEGYVIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQ 258
            +RPELS TQKKLQK+GY IP SRAG+GY+S EPVRIT KGKAKVA+T HITVEE  DSE+
Sbjct: 1049 ERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEE 1108

Query: 259  AKEDEIDHRTSAFDRIGLSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEE 318
             K+     R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++
Sbjct: 1109 GKKVR-SQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKK 1168

Query: 319  KGSVNSTLTTRLSAFQRLSVATKRSKEWSPISVSNITETSSKTKGDEKIRSAVPSRMKIK 378
              S++ T TTR SAF+RLSV+  R ++ + +SVSN    SS   GDE+IRSA PSRMK K
Sbjct: 1169 VRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSN---KSSLVTGDEEIRSAFPSRMKRK 1228

Query: 379  LLVSINAEGSLKIKRHDVIITRSKEKIPDDE 407
            + VS+N EGSLK+KRHDV+ TR ++  P+DE
Sbjct: 1229 MFVSVNTEGSLKVKRHDVVFTRPEDNEPEDE 1255

[Close]

BLAST of Lag0027959 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-06
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 37  ELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAVKES 81
           ELE+KVNMLMKAVEERD EIA LKNHIESRD AESS T  +K +
Sbjct: 98  ELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNA 141

HSP 2 Score: 356.3 bits (913), Expect = 1.8e-94
Identity = 197/331 (59.52%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 79   ESKVSPSQTEKILCSEEKKTNAPVLRYVPLSRPKKGDSPFAECSNNLRVGDIEILKENFI 138
            E+K+   + EKI   +++ +N PVLRY+PLSR KKG+SPF ECS NL V + EILKENF 
Sbjct: 907  ETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFT 966

Query: 139  TPLTKISK---QKVKDKQVKATLPDRRTKEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFD 198
             PLTKI K   +K++ K ++A LP+RRT EGFDPKAYKL+AKAGYDFT  TE KS++IFD
Sbjct: 967  APLTKIEKGEAKKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFD 1026

Query: 199  QRPELSSTQKKLQKEGYVIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQ 258
            +RPELS TQKKLQK+GY IP SRAG+GY+S EPVRIT KGKAKVA+T HITVEE  DSE+
Sbjct: 1027 ERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEE 1086

Query: 259  AKEDEIDHRTSAFDRIGLSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEE 318
             K+     R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++
Sbjct: 1087 GKKVR-SQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKK 1146

Query: 319  KGSVNSTLTTRLSAFQRLSVATKRSKEWSPISVSNITETSSKTKGDEKIRSAVPSRMKIK 378
              S++ T TTR SAF+RLSV+  R ++ + +SVSN    SS   GDE+IRSA PSRMK K
Sbjct: 1147 VRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSN---KSSLVTGDEEIRSAFPSRMKRK 1206

Query: 379  LLVSINAEGSLKIKRHDVIITRSKEKIPDDE 407
            + VS+N EGSLK+KRHDV+ TR ++  P+DE
Sbjct: 1207 MFVSVNTEGSLKVKRHDVVFTRPEDNEPEDE 1233

[Close]

BLAST of Lag0027959 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.8e-05
Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 38  LERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAVKES 81
           LE+KVNM MKAVEERD EIA LKNHIESRD AESS T  +K +
Sbjct: 99  LEKKVNMHMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNA 141

HSP 2 Score: 356.3 bits (913), Expect = 1.8e-94
Identity = 197/331 (59.52%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 79   ESKVSPSQTEKILCSEEKKTNAPVLRYVPLSRPKKGDSPFAECSNNLRVGDIEILKENFI 138
            E+K+   + EKI   +++ +N PVLRY+PLSR KKG+SPF ECS NL V + EILKENF 
Sbjct: 859  ETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFT 918

Query: 139  TPLTKISK---QKVKDKQVKATLPDRRTKEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFD 198
             PLTKI K   +K++ K ++A LP+RRT EGFDPKAYKL+AKAGYDFT  TE KS++IFD
Sbjct: 919  APLTKIEKGEAKKIEKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFD 978

Query: 199  QRPELSSTQKKLQKEGYVIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQ 258
            +RPELS TQKKLQK+GY IP SRAG+GY+S EPVRIT KGKAKVA+T HITVEE  DSE+
Sbjct: 979  ERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEE 1038

Query: 259  AKEDEIDHRTSAFDRIGLSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEE 318
             K+     R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++
Sbjct: 1039 GKKVR-SQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKK 1098

Query: 319  KGSVNSTLTTRLSAFQRLSVATKRSKEWSPISVSNITETSSKTKGDEKIRSAVPSRMKIK 378
              S++ T TTR SAF+RLSV+  R ++ + +SVSN    SS   GDE+IRSA PSRMK K
Sbjct: 1099 VRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSN---KSSLVTGDEEIRSAFPSRMKRK 1158

Query: 379  LLVSINAEGSLKIKRHDVIITRSKEKIPDDE 407
            + VS+N EGSLK+KRHDV+ TR ++  P+DE
Sbjct: 1159 MFVSVNTEGSLKVKRHDVVFTRPEDNEPEDE 1185

[Close]

BLAST of Lag0027959 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-05
Identity = 32/42 (76.19%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 37  ELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAVK 79
           ELE+KVNMLMKAVEERD  IA  KNHIESRD AESS T  +K
Sbjct: 98  ELEKKVNMLMKAVEERDFVIALFKNHIESRDAAESSHTQTIK 139

HSP 2 Score: 352.8 bits (904), Expect = 2.0e-93
Identity = 198/363 (54.55%), Postives = 258/363 (71.07%), Query Frame = 0


Query: 47  KAVEERDCEIASLKNHIESRDIAESSQTPAVKESKVSPSQTEKILCSEEKKTNAPVLRYV 106
           K   + + E+ + K   +   +       +  E+K+   + EKI   +++ +N PVLRY+
Sbjct: 251 KGTFKNEQEMITSKKSNKGNTLNSQQNGESTTETKLRAPEAEKIATLQKEVSNPPVLRYI 310

Query: 107 PLSRPKKGDSPFAECSNNLRVGDIEILKENFITPLTKISK---QKVKDKQVKATLPDRRT 166
           PLSR KKG+SPFAECS N  V + EILKENF  PLTKI K   +K++ K+++A LP+RRT
Sbjct: 311 PLSRRKKGESPFAECSKNPTVKNTEILKENFTPPLTKIEKGEAKKIEKKELEAYLPERRT 370

Query: 167 KEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFDQRPELSSTQKKLQKEGYVIPISRAGLGY 226
            EGFDPKAYKL+AKAGYDFT  TE KS++IFD+RPELS TQKKLQK+GY IP SRAG+GY
Sbjct: 371 VEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGY 430

Query: 227 KSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSAFDRIGLSVTRSSVFQR 286
           +S EP+RIT KGKAKV +T HITVEE  DS++ K+D    R+S FDRI  S  R SVFQR
Sbjct: 431 QSSEPIRITGKGKAKVTNTCHITVEESKDSKEGKKDR-SQRSSVFDRIAFSAIRPSVFQR 490

Query: 287 LSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKGSVNSTLTTRLSAFQRLSVATKRSKEW 346
           +ST+  +D +Q  T  STR SAFQRL+  +++  S++ T TTR SAF+RLSV   + ++ 
Sbjct: 491 VSTSIAKDSNQVSTCSSTRLSAFQRLNTNAKKVQSISPTSTTRKSAFKRLSVLVTKGQKK 550

Query: 347 SPISVSNITETSSKTKGDEKIRSAVPSRMKIKLLVSINAEGSLKIKRHDVIITRSKEKIP 406
           + ISVSN    SS   GDE+IRSA PSRMK K+ VS+N EGSLK+KRHDV+ TR ++  P
Sbjct: 551 ASISVSN---KSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEP 609

[Close]

BLAST of Lag0027959 vs. ExPASy TrEMBL
Match: A0A5D3C783 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00570 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 9.7e-93
Identity = 194/331 (58.61%), Postives = 246/331 (74.32%), Query Frame = 0


Query: 79   ESKVSPSQTEKILCSEEKKTNAPVLRYVPLSRPKKGDSPFAECSNNLRVGDIEILKENFI 138
            E+K+   + EKI   +++ +N PVL Y+P SR KKG+SPFAEC  NL V + EILKENF 
Sbjct: 684  ETKLRAPEAEKIATLQKEVSNLPVLCYIPFSRHKKGESPFAECLKNLTVKNTEILKENFT 743

Query: 139  TPLTKISK---QKVKDKQVKATLPDRRTKEGFDPKAYKLLAKAGYDFTAHTEFKSLRIFD 198
             PLTKI K   +K++ K ++A LP+RRT +GFDPKAYKL+AKAGYDFT  TE KS++IFD
Sbjct: 744  APLTKIEKGEAKKIEKKDLEAYLPERRTVKGFDPKAYKLMAKAGYDFTTRTELKSVKIFD 803

Query: 199  QRPELSSTQKKLQKEGYVIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQ 258
            +RPELS TQKKLQK+GY IP SRAG+GY S EPVRIT KGK KVA+T HITVEE  DSE+
Sbjct: 804  ERPELSPTQKKLQKQGYSIPNSRAGIGYHSSEPVRITGKGKVKVANTCHITVEESKDSEE 863

Query: 259  AKEDEIDHRTSAFDRIGLSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEE 318
             K+D    R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++
Sbjct: 864  GKKDR-SQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKK 923

Query: 319  KGSVNSTLTTRLSAFQRLSVATKRSKEWSPISVSNITETSSKTKGDEKIRSAVPSRMKIK 378
              S++ T TTR SAF+RLSV+  R ++ + +SVSN    SS   GDE+IRSA PSRMK K
Sbjct: 924  VRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSN---KSSLVTGDEEIRSAFPSRMKRK 983

Query: 379  LLVSINAEGSLKIKRHDVIITRSKEKIPDDE 407
            + VS+N EGSLK+KRHDV+ TR ++  P+DE
Sbjct: 984  MFVSVNTEGSLKVKRHDVVFTRPEDNEPEDE 1010

The following BLAST results are available for this feature:

BLAST of Lag0027959 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98225.1	3.7e-94	59.52	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
TYJ98225.1	1.2e-04	74.42	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
KAA0047477.1	6.4e-06	77.27	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]
TYK18071.1	7.1e-05	76.19	uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]	[more]
TYK06199.1	2.0e-92	58.61	uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0027959 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0027959 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZU9	1.8e-94	59.52	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5A7TZU9	3.1e-06	77.27	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5D3BIH8	5.8e-05	74.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D1E5	3.4e-05	76.19	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402...	[more]
A0A5D3C783	9.7e-93	58.61	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00570...	[more]

Pages

BLAST of Lag0027959 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 409..423

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027959.1	Lag0027959.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding