Lag0027880 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0027880
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr8: 6575579 .. 6577624 (-)
RNA-Seq ExpressionLag0027880
SyntenyLag0027880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTTTCTCTTCAATCCAACCTTCTTCAATGCAATTGCAATCAACTTCATCCTTTTCTTCCCCCATCCCCCTCTTCCTAATCGGAACCAAAAATTCCCCCAAAATTCGCCTGAACAAGATCAAACCAAACCCCAGAACTCCAATTCCAATCTTCAGAGCCTCGGCCTCTTCAAAATCCAAAGACGTTTGGAGAAGAAAAACCCCATTTGAAAAATCCCCATCTCCCCAAAAGTACCAACGCCCTGCTAGAAAGCAAAGAGAGTCCTCTCATTTAGACCACAGCGTCGACATGGACGAGCTTTTAGCGTCAATTGGGCAAACGAAGAACGAGCAAGAGCTGTACTCGATTCTTTCGCCATACAAGGGCCGGCAGCTTTCAATGCGGTTCATGGTATCGATTCTGTCGCGAGAATCGGACTGGCAACGGTCCCTTGCGATTCTCGATTGGATCAACGAAGAGGCTCTTTACACTCCTTCGGTGTTCGCTTACAATGTTGTTTTACGTAATGTGCTACGTGACAAGCAGTGGGAGCTTGCACACGGACTGTTCGACGAAATGCGCCAAAGAGCTCTTGCAGCTGATAGGTATACTTATTCGACCCTTATCACTTATTTTGGAAAAGAGGGTATGTTTGATGCTGCCCTCTCTTGGTTACAGAAAATGGAGCAAGATCGTGTGACTGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCGAAAGCTATTTCTATTTTTTCAAGATTGAAGAGATCTGGGATTACCCCTGATATTGTAGCCTATAATTCTATGATAAATGTGTTTGGGAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAGGAGATGAGAGCTGTGGATGTTGTACCCGATACTGTTAGCTATTCGACTTTGCTGAGTATGTTTGTTGAGAATGAGAAGTTTTTGGAGGCACTCTCTGTGTTTTCTGAGATGACAGAGGTCAACTGCCCGCTTGATCTTACAACTTGTAATATTATGATTGATGTTTATGGTCAATTGGATATGGTGAAGGAAGCCGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAACCAAATGTTGTGAGTTACAATACAATTTTGAGGGTTTATGGTGAGGCTGAGCTTTTTGGGGAAGCGATTCACCTTTTTCGGTTGATGCAGAGGAAGGAGATTGAGCAGAATGTTGTGACGTATAACACCATGATCAAGATATATGGGAAGTCTTTGGAGCATGAAAAAGCAACAAATCTTGTGCAAGAGATGCAAAATAGAGGAATTGAACCGAATGCTATTACGTATTCGACGATAATTTCGATATGGGGGAAAGCAGGAAAGTTGGAGAGAGCTGCAATGTTGTTTCAGAAGCTGAGAAGCTCTGGAGCTGAGATTGATCAGGTCCTTTACCAGACTATGATTGTGGCCTATGAGAGGGCAGGCTTGGTTGCTCATGCCAAGCGTTTGCTTCACGAGCTACGGCAACCAGACAATATTCCGAGGAAGACAGCAATTACCATTCTTGCTAGAGCTGGTCGAATCGAAGAAGCCACTTGGGTTTTTCGTCAGGCATTTGATGCAGGAGAGTTGAAGGACATATCTGTTTTCGGGTGCATGATTGATCTGTTTTCAAGGAACAAGAAGCACACAAATGTTGTGGAGGTATTTGAGAAGATGAGAAGTGTGGGACATTTCCCCAACTCTAATGTCATTGCCCTTGTCCTAAACGCTTATGGGAAGTTAAGGGATTTTGACAATGCTGATGCTGTATATATGGAGATGCAAGAAGAGGGCTGTGTTTTTCCAGATGAAGTACACTTCCAGATGCTCAGTCTCTATGGCGCAAGAAAAGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAGTTGCATCTAGTCGTTGCCAGCATTTACGAAAGAGCTAATAGACTGAACGATGCATCTCGGATTATGAACAGGATGAACGAAATGGCGACGTCAAGATCATGA

mRNA sequence

ATGCGTTTCTCTTCAATCCAACCTTCTTCAATGCAATTGCAATCAACTTCATCCTTTTCTTCCCCCATCCCCCTCTTCCTAATCGGAACCAAAAATTCCCCCAAAATTCGCCTGAACAAGATCAAACCAAACCCCAGAACTCCAATTCCAATCTTCAGAGCCTCGGCCTCTTCAAAATCCAAAGACGTTTGGAGAAGAAAAACCCCATTTGAAAAATCCCCATCTCCCCAAAAGTACCAACGCCCTGCTAGAAAGCAAAGAGAGTCCTCTCATTTAGACCACAGCGTCGACATGGACGAGCTTTTAGCGTCAATTGGGCAAACGAAGAACGAGCAAGAGCTGTACTCGATTCTTTCGCCATACAAGGGCCGGCAGCTTTCAATGCGGTTCATGGTATCGATTCTGTCGCGAGAATCGGACTGGCAACGGTCCCTTGCGATTCTCGATTGGATCAACGAAGAGGCTCTTTACACTCCTTCGGTGTTCGCTTACAATGTTGTTTTACGTAATGTGCTACGTGACAAGCAGTGGGAGCTTGCACACGGACTGTTCGACGAAATGCGCCAAAGAGCTCTTGCAGCTGATAGGTATACTTATTCGACCCTTATCACTTATTTTGGAAAAGAGGGTATGTTTGATGCTGCCCTCTCTTGGTTACAGAAAATGGAGCAAGATCGTGTGACTGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCGAAAGCTATTTCTATTTTTTCAAGATTGAAGAGATCTGGGATTACCCCTGATATTGTAGCCTATAATTCTATGATAAATGTGTTTGGGAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAGGAGATGAGAGCTGTGGATGTTGTACCCGATACTGTTAGCTATTCGACTTTGCTGAGTATGTTTGTTGAGAATGAGAAGTTTTTGGAGGCACTCTCTGTGTTTTCTGAGATGACAGAGGTCAACTGCCCGCTTGATCTTACAACTTGTAATATTATGATTGATGTTTATGGTCAATTGGATATGGTGAAGGAAGCCGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAACCAAATGTTGTGAGTTACAATACAATTTTGAGGGTTTATGGTGAGGCTGAGCTTTTTGGGGAAGCGATTCACCTTTTTCGGTTGATGCAGAGGAAGGAGATTGAGCAGAATGTTGTGACGTATAACACCATGATCAAGATATATGGGAAGTCTTTGGAGCATGAAAAAGCAACAAATCTTGTGCAAGAGATGCAAAATAGAGGAATTGAACCGAATGCTATTACGTATTCGACGATAATTTCGATATGGGGGAAAGCAGGAAAGTTGGAGAGAGCTGCAATGTTGTTTCAGAAGCTGAGAAGCTCTGGAGCTGAGATTGATCAGGTCCTTTACCAGACTATGATTGTGGCCTATGAGAGGGCAGGCTTGGTTGCTCATGCCAAGCGTTTGCTTCACGAGCTACGGCAACCAGACAATATTCCGAGGAAGACAGCAATTACCATTCTTGCTAGAGCTGGTCGAATCGAAGAAGCCACTTGGGTTTTTCGTCAGGCATTTGATGCAGGAGAGTTGAAGGACATATCTGTTTTCGGGTGCATGATTGATCTGTTTTCAAGGAACAAGAAGCACACAAATGTTGTGGAGGTATTTGAGAAGATGAGAAGTGTGGGACATTTCCCCAACTCTAATGTCATTGCCCTTGTCCTAAACGCTTATGGGAAGTTAAGGGATTTTGACAATGCTGATGCTGTATATATGGAGATGCAAGAAGAGGGCTGTGTTTTTCCAGATGAAGTACACTTCCAGATGCTCAGTCTCTATGGCGCAAGAAAAGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAGTTGCATCTAGTCGTTGCCAGCATTTACGAAAGAGCTAATAGACTGAACGATGCATCTCGGATTATGAACAGGATGAACGAAATGGCGACGTCAAGATCATGA

Coding sequence (CDS)

ATGCGTTTCTCTTCAATCCAACCTTCTTCAATGCAATTGCAATCAACTTCATCCTTTTCTTCCCCCATCCCCCTCTTCCTAATCGGAACCAAAAATTCCCCCAAAATTCGCCTGAACAAGATCAAACCAAACCCCAGAACTCCAATTCCAATCTTCAGAGCCTCGGCCTCTTCAAAATCCAAAGACGTTTGGAGAAGAAAAACCCCATTTGAAAAATCCCCATCTCCCCAAAAGTACCAACGCCCTGCTAGAAAGCAAAGAGAGTCCTCTCATTTAGACCACAGCGTCGACATGGACGAGCTTTTAGCGTCAATTGGGCAAACGAAGAACGAGCAAGAGCTGTACTCGATTCTTTCGCCATACAAGGGCCGGCAGCTTTCAATGCGGTTCATGGTATCGATTCTGTCGCGAGAATCGGACTGGCAACGGTCCCTTGCGATTCTCGATTGGATCAACGAAGAGGCTCTTTACACTCCTTCGGTGTTCGCTTACAATGTTGTTTTACGTAATGTGCTACGTGACAAGCAGTGGGAGCTTGCACACGGACTGTTCGACGAAATGCGCCAAAGAGCTCTTGCAGCTGATAGGTATACTTATTCGACCCTTATCACTTATTTTGGAAAAGAGGGTATGTTTGATGCTGCCCTCTCTTGGTTACAGAAAATGGAGCAAGATCGTGTGACTGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCGAAAGCTATTTCTATTTTTTCAAGATTGAAGAGATCTGGGATTACCCCTGATATTGTAGCCTATAATTCTATGATAAATGTGTTTGGGAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAGGAGATGAGAGCTGTGGATGTTGTACCCGATACTGTTAGCTATTCGACTTTGCTGAGTATGTTTGTTGAGAATGAGAAGTTTTTGGAGGCACTCTCTGTGTTTTCTGAGATGACAGAGGTCAACTGCCCGCTTGATCTTACAACTTGTAATATTATGATTGATGTTTATGGTCAATTGGATATGGTGAAGGAAGCCGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAACCAAATGTTGTGAGTTACAATACAATTTTGAGGGTTTATGGTGAGGCTGAGCTTTTTGGGGAAGCGATTCACCTTTTTCGGTTGATGCAGAGGAAGGAGATTGAGCAGAATGTTGTGACGTATAACACCATGATCAAGATATATGGGAAGTCTTTGGAGCATGAAAAAGCAACAAATCTTGTGCAAGAGATGCAAAATAGAGGAATTGAACCGAATGCTATTACGTATTCGACGATAATTTCGATATGGGGGAAAGCAGGAAAGTTGGAGAGAGCTGCAATGTTGTTTCAGAAGCTGAGAAGCTCTGGAGCTGAGATTGATCAGGTCCTTTACCAGACTATGATTGTGGCCTATGAGAGGGCAGGCTTGGTTGCTCATGCCAAGCGTTTGCTTCACGAGCTACGGCAACCAGACAATATTCCGAGGAAGACAGCAATTACCATTCTTGCTAGAGCTGGTCGAATCGAAGAAGCCACTTGGGTTTTTCGTCAGGCATTTGATGCAGGAGAGTTGAAGGACATATCTGTTTTCGGGTGCATGATTGATCTGTTTTCAAGGAACAAGAAGCACACAAATGTTGTGGAGGTATTTGAGAAGATGAGAAGTGTGGGACATTTCCCCAACTCTAATGTCATTGCCCTTGTCCTAAACGCTTATGGGAAGTTAAGGGATTTTGACAATGCTGATGCTGTATATATGGAGATGCAAGAAGAGGGCTGTGTTTTTCCAGATGAAGTACACTTCCAGATGCTCAGTCTCTATGGCGCAAGAAAAGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAGTTGCATCTAGTCGTTGCCAGCATTTACGAAAGAGCTAATAGACTGAACGATGCATCTCGGATTATGAACAGGATGAACGAAATGGCGACGTCAAGATCATGA

Protein sequence

MRFSSIQPSSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKSKDVWRRKTPFEKSPSPQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDASRIMNRMNEMATSRS
Homology
[Close]
BLAST of Lag0027880 vs. NCBI nr
Match: XP_008443439.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucumis melo] >KAA0053737.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25666.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.6 bits (3206), Expect = 0.0e+00
Identity = 634/676 (93.79%), Postives = 654/676 (96.75%), Query Frame = 0 

Query: 9   SSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKSKDVWRRKT 68
           SS+QLQST SFSSPIPLFLI T++ PKIR NKIK  PRT IPIFRAS+SS SKD+WRRKT
Sbjct: 4   SSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKT 63

Query: 69  PFEKSPS---PQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128
           P EKS +   PQKYQR AR+QRESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGRQ
Sbjct: 64  PSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQ 123

Query: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQWELAHGLFD 188
           LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLR KQWELAHGLFD
Sbjct: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183

Query: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLC 248
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIELSRKLC
Sbjct: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243

Query: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTVSYS
Sbjct: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYS 303

Query: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368
           TLL+MFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW MRKM
Sbjct: 304 TLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363

Query: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423

Query: 429 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 488
           TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVA 483

Query: 489 YERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVF 548
           YE+AGLVAHAKRLLHEL+QPDNIPRKTAITILA+AGRIEEATWVFRQAFDAGELKDISVF
Sbjct: 484 YEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543

Query: 549 GCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQE 608
           GCMIDLFSRNKKH NVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD ADAVYMEMQE
Sbjct: 544 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQE 603

Query: 609 EGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 668
           +GC+FPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYER NRLN+
Sbjct: 604 KGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNN 663

Query: 669 ASRIMNRMNEMATSRS 682
           ASRIMNRMNE A SRS
Sbjct: 664 ASRIMNRMNETAISRS 679

[Close]
BLAST of Lag0027880 vs. NCBI nr
Match: XP_023521621.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023527980.1 pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1229.2 bits (3179), Expect = 0.0e+00
Identity = 634/681 (93.10%), Postives = 653/681 (95.89%), Query Frame = 0 

Query: 4   SSIQPSSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKSKDV 63
           S I PSSMQLQSTSSFSSP+ L LI T+N+ K+ L++ K  PR  I + RAS+SS SKDV
Sbjct: 5   SLISPSSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISVPRASSSSTSKDV 64

Query: 64  WRRKTPFEKS---PSPQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSP 123
           WRRKTP EKS   P PQKY+R AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSILSP
Sbjct: 65  WRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSP 124

Query: 124 YKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQWELA 183
           YKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLR KQWELA
Sbjct: 125 YKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELA 184

Query: 184 HGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIEL 243
           HGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIEL
Sbjct: 185 HGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIEL 244

Query: 244 SRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPD 303
           SRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPD
Sbjct: 245 SRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPD 304

Query: 304 TVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW 363
           TVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFW
Sbjct: 305 TVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFW 364

Query: 364 SMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 423
           SMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL
Sbjct: 365 SMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 424

Query: 424 EHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQ 483
           EHEKATNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQ
Sbjct: 425 EHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQ 484

Query: 484 TMIVAYERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELK 543
           TMIVAYERAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EEATWVFRQAFDAGELK
Sbjct: 485 TMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELK 544

Query: 544 DISVFGCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVY 603
           DISVFGCMIDLFSRNKKH NVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD ADAVY
Sbjct: 545 DISVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVY 604

Query: 604 MEMQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERA 663
            EMQEEGCVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVASIYERA
Sbjct: 605 TEMQEEGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERA 664

Query: 664 NRLNDASRIMNRMNEMATSRS 682
           NRLNDASRIMNRMNEM+ SRS
Sbjct: 665 NRLNDASRIMNRMNEMSISRS 685

[Close]
BLAST of Lag0027880 vs. NCBI nr
Match: XP_022934402.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1228.4 bits (3177), Expect = 0.0e+00
Identity = 634/684 (92.69%), Postives = 655/684 (95.76%), Query Frame = 0 

Query: 1   MRFSSIQPSSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKS 60
           M  +SI PSSMQLQSTSSFSSP+ L LI T+N+ K+ L++ K  PR  I I RAS+SS S
Sbjct: 1   MVVASISPSSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60

Query: 61  KDVWRRKTPFEKS---PSPQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KD+WRRKT  EKS   P PQKY+R AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 61  KDIWRRKTSSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLR KQW
Sbjct: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKM+QDRV+GDLVLYSNL
Sbjct: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EEATWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNAD 600
           ELKDISVFGCMIDLFSRNKKH NVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD AD
Sbjct: 541 ELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIY 660
           AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVASIY
Sbjct: 601 AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIY 660

Query: 661 ERANRLNDASRIMNRMNEMATSRS 682
           ERANRLNDASRIMNRMNEM+ SRS
Sbjct: 661 ERANRLNDASRIMNRMNEMSISRS 684

[Close]
BLAST of Lag0027880 vs. NCBI nr
Match: KAG6580983.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1226.8 bits (3173), Expect = 0.0e+00
Identity = 633/684 (92.54%), Postives = 654/684 (95.61%), Query Frame = 0 

Query: 1   MRFSSIQPSSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKS 60
           M  +SI PSSMQLQSTSSFSSP+ L LI T+N+ K+ L++ K  PR  I I RAS+SS S
Sbjct: 1   MVVASISPSSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60

Query: 61  KDVWRRKTPFEKS---PSPQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KD+WRRKTP EKS   P PQKY+R AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 61  KDIWRRKTPSEKSTATPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLR KQW
Sbjct: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNL
Sbjct: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EE+TWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEESTWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNAD 600
           ELKDISVFGCMIDLFSRNKKH NVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD AD
Sbjct: 541 ELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIY 660
           AVYMEMQEEGCVFPDEVHFQMLSLY ARKDYKRLE  FERLDSDPNINKKELHLVVASIY
Sbjct: 601 AVYMEMQEEGCVFPDEVHFQMLSLYSARKDYKRLEESFERLDSDPNINKKELHLVVASIY 660

Query: 661 ERANRLNDASRIMNRMNEMATSRS 682
           ERANRLNDASRIMNRMNEM+ SRS
Sbjct: 661 ERANRLNDASRIMNRMNEMSISRS 684

[Close]
BLAST of Lag0027880 vs. NCBI nr
Match: XP_022983728.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 632/684 (92.40%), Postives = 654/684 (95.61%), Query Frame = 0 

Query: 1   MRFSSIQPSSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKS 60
           M  +SI PSSMQLQSTSSFSSP+ L L  T+N+ K+ L++ K  PR  I I RAS+SS S
Sbjct: 1   MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60

Query: 61  KDVWRRKTPFEKS---PSPQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KD+WRRKTP EKS   P PQKY+R AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 61  KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLR KQW
Sbjct: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNL
Sbjct: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EEATWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNAD 600
           ELKDISVFGCMIDLFSRNK+H NVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD AD
Sbjct: 541 ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIY 660
           AVYMEMQE+GCVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVA IY
Sbjct: 601 AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY 660

Query: 661 ERANRLNDASRIMNRMNEMATSRS 682
           ERANRLNDASRIMNRMNEM+ SRS
Sbjct: 661 ERANRLNDASRIMNRMNEMSISRS 684

[Close]
BLAST of Lag0027880 vs. ExPASy Swiss-Prot
Match: Q9FLD8 (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g39980 PE=2 SV=1)

HSP 1 Score: 1007.7 bits (2604), Expect = 6.4e-293
Identity = 517/670 (77.16%), Postives = 592/670 (88.36%), Query Frame = 0 

Query: 11  MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKS-----KDVWR 70
           +++ S+SS S P+ L L        I  + I P  R    IF  SASS S     K VW 
Sbjct: 3   IEIASSSSLSLPL-LPLTRPHIYTSIPFSTI-PEARQRNLIFTVSASSSSESTQNKKVW- 62

Query: 71  RKTPFEKSPSPQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 130
           RK P + + S  +  R  R+ + S+ LDH+VDMDELLASI QT+NE+EL+S+LS YK RQ
Sbjct: 63  RKQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQ 122

Query: 131 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQWELAHGLFD 190
           LS+RFMVS+LSRE+DWQRSLA+LDW++EEA YTPSVFAYNVVLRNVLR KQ+++AHGLFD
Sbjct: 123 LSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFD 182

Query: 191 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLC 250
           EMRQRALA DRYTYSTLIT FGKEGMFD+ALSWLQKMEQDRV+GDLVLYSNLIELSR+LC
Sbjct: 183 EMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC 242

Query: 251 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 310
           DYSKAISIFSRLKRSGITPD+VAYNSMINV+GKAKLFREAR L+KEM    V+P+TVSYS
Sbjct: 243 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 302

Query: 311 TLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 370
           TLLS++VEN KFLEALSVF+EM EVNC LDLTTCNIMIDVYGQLDMVKEADRLFWS+RKM
Sbjct: 303 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 362

Query: 371 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 430
            IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++EHEKA
Sbjct: 363 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 422

Query: 431 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 490
           TNLVQEMQ+RGIEPNAITYSTIISIWGKAGKL+RAA LFQKLRSSG EIDQVLYQTMIVA
Sbjct: 423 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 482

Query: 491 YERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVF 550
           YER GL+ HAKRLLHEL+ PDNIPR+TAITILA+AGR EEATWVFRQAF++GE+KDISVF
Sbjct: 483 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVF 542

Query: 551 GCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQE 610
           GCMI+L+SRN+++ NV+EVFEKMR+ G+FP+SNVIA+VLNAYGK R+F+ AD VY EMQE
Sbjct: 543 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQE 602

Query: 611 EGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 670
           EGCVFPDEVHFQMLSLY ++KD++ +ESLF+RL+SDPN+N KELHLVVA++YERA++LND
Sbjct: 603 EGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLND 662

Query: 671 ASRIMNRMNE 676
           ASR+MNRM E
Sbjct: 663 ASRVMNRMRE 669

[Close]
BLAST of Lag0027880 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 208.8 bits (530), Expect = 2.0e-52
Identity = 132/436 (30.28%), Postives = 231/436 (52.98%), Query Frame = 0 

Query: 157 YTPSVFAYNVVLRNVLRDKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 216
           Y P+   +N ++  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 217 SWLQKMEQDRVTGDLVLYSNLIELSRKLCDY---SKAISIFSRLKRSGITPDIVAYNSMI 276
           S L+KME+ ++  D+V+Y+ +I+    LC+Y   + A+++F+ +   GI P++V YNS+I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 300

Query: 277 NVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCP 336
                   + +A  LL +M    + P+ V++S L+  FV+  K +EA  ++ EM + +  
Sbjct: 301 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 337 LDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHL 396
            D+ T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 420

Query: 397 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGK 456
           FR M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K
Sbjct: 421 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 480

Query: 457 AGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELR----QPDNIP 516
            GKLE+A ++F+ L+ S  E D   Y  MI    +AG V     L   L     +P+ I 
Sbjct: 481 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 540

Query: 517 RKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHTNVVEVFEKMR 576
             T I+   R G  EEA  +FR+  + G L +   +  +I    R+       E+ ++MR
Sbjct: 541 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 600

Query: 577 SVGHFPNSNVIALVLN 586
           S G   +++ I++V+N
Sbjct: 601 SCGFVGDASTISMVIN 613

[Close]
BLAST of Lag0027880 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.7e-51
Identity = 130/571 (22.77%), Postives = 266/571 (46.58%), Query Frame = 0 

Query: 94  HSVDMDELLASIGQTKNEQELYSILSPYKGRQLSMRFMVSILSR---ESDWQRSLAILDW 153
           +S D++ L+  +        +   L  +K + LS+     +        DWQRSL +  +
Sbjct: 72  YSYDVESLINKLSSLPPRGSIARCLDIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKY 131

Query: 154 INEEALYTPSVFAYNVVLRNVLRDKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEG 213
           +  +    P+   Y +++  + R+   +    +FDEM  + ++   ++Y+ LI  +G+ G
Sbjct: 132 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 191

Query: 214 MFDAALSWLQKMEQDRVTGDLVLYSNLIE-LSRKLCDYSKAISIFSRLKRSGITPDIVAY 273
            ++ +L  L +M+ ++++  ++ Y+ +I   +R   D+   + +F+ ++  GI PDIV Y
Sbjct: 192 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 251

Query: 274 NSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTE 333
           N++++      L  EA  + + M    +VPD  +YS L+  F +  +  +   +  EM  
Sbjct: 252 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 311

Query: 334 VNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGE 393
                D+T+ N++++ Y +   +KEA  +F  M+  G  PN  +Y+ +L ++G++  + +
Sbjct: 312 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 371

Query: 394 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIIS 453
              LF  M+    + +  TYN +I+++G+    ++   L  +M    IEP+  TY  II 
Sbjct: 372 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 431

Query: 454 IWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAK---RLLHELRQPD 513
             GK G  E A  + Q + ++        Y  +I A+ +A L   A      +HE+    
Sbjct: 432 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 491

Query: 514 NIPR-KTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHTNVVEVF 573
           +I    + +   AR G ++E+  +  +  D+G  ++   F   I+ + +  K    V+ +
Sbjct: 492 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 551

Query: 574 EKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEGCVFPDEVHFQMLSLYGAR 633
             M      P+   +  VL+ Y   R  D     + EM+    +     +  ML++YG  
Sbjct: 552 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 611

Query: 634 KDYKRLESLFERLDSDPNINKKELHLVVASI 657
           + +  +  L E + S+   N   +H V+  +
Sbjct: 612 ERWDDVNELLEEMLSNRVSN---IHQVIGQM 638

[Close]
BLAST of Lag0027880 vs. ExPASy Swiss-Prot
Match: Q9LS88 (Pentatricopeptide repeat-containing protein At3g23020 OS=Arabidopsis thaliana OX=3702 GN=At3g23020 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.6e-49
Identity = 146/611 (23.90%), Postives = 280/611 (45.83%), Query Frame = 0 

Query: 112 QELYSILSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNV 171
           +++   LSP+  R LS +    IL  +  W+R++ I +W   +  Y  +V  YN++LR +
Sbjct: 139 EDVEDALSPWAER-LSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRIL 198

Query: 172 LRDKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDL 231
            +  +W     L+DEM ++ +     TY TLI  + K G+   AL WL KM +  +  D 
Sbjct: 199 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 258

Query: 232 VLYSNLIELSRKLCDYSKAISIFSRLK------RSGITPDIVAYNSMINVFGKAKLFREA 291
           V    ++++ +K  ++ KA   F +         S +      YN+MI+ +GK+   +EA
Sbjct: 259 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEA 318

Query: 292 RFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDV 351
               K M    +VP TV+++T++ ++  N +  E  S+   M +++C  D  T NI+I +
Sbjct: 319 SETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISL 378

Query: 352 YGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQN 411
           + + + ++ A   F  M+  G++P+ VSY T+L  +    +  EA  L   M    +E +
Sbjct: 379 HTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEID 438

Query: 412 VVTYNTMIKIY------GKSLEHEKATNLVQEMQNRGIEPN------------------- 471
             T + + ++Y       KS    K  ++   M + G   N                   
Sbjct: 439 EYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFIC 498

Query: 472 --------AITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLV 531
                    I Y+ +I  +G +   E+A  LF+ + S G   D+  Y T++     A + 
Sbjct: 499 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 558

Query: 532 AHAKRLLHELRQ----PDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCM 591
              +  L ++R+     D IP    I+   + G++  A  V+++  +     D+ V+G +
Sbjct: 559 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 618

Query: 592 IDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQE--E 651
           I+ F+        +   E M+  G   NS +   ++  Y K+   D A+A+Y ++ +   
Sbjct: 619 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 678

Query: 652 GCVFPDEVHFQ-MLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 677
              +PD      M++LY  R   ++ E++F+ +      N+    +++  +Y++  R  +
Sbjct: 679 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLC-MYKKNGRFEE 738

[Close]
BLAST of Lag0027880 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.1e-49
Identity = 128/446 (28.70%), Postives = 229/446 (51.35%), Query Frame = 0 

Query: 144 SLAILDWINEEALYTPSVFAYNVVLRNVLRDKQWELAHGLFDEMRQRALAADRYTYSTLI 203
           ++A++D + E   Y P  F +  ++  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 204 TYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 263
               K G  D ALS L+KME+ ++  D+V+Y+ +I+   K      A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 264 PDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSV 323
           PD+  Y+S+I+       + +A  LL +M    + P+ V++S L+  FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 324 FSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGE 383
           + EM + +   D+ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 384 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAIT 443
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 444 YSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELR 503
           Y+ ++    K GKL +A ++F+ L+ S  E D   Y  MI    +AG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 504 ----QPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHT 563
                P+ I   T I+   R G  EEA  + ++  + G L +   +  +I    R+    
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 564 NVVEVFEKMRSVGHFPNSNVIALVLN 586
              E+ ++MRS G   +++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

[Close]
BLAST of Lag0027880 vs. ExPASy TrEMBL
Match: A0A5A7UGV7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008300 PE=4 SV=1)

HSP 1 Score: 1239.6 bits (3206), Expect = 0.0e+00
Identity = 634/676 (93.79%), Postives = 654/676 (96.75%), Query Frame = 0 

Query: 9   SSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKSKDVWRRKT 68
           SS+QLQST SFSSPIPLFLI T++ PKIR NKIK  PRT IPIFRAS+SS SKD+WRRKT
Sbjct: 4   SSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKT 63

Query: 69  PFEKSPS---PQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128
           P EKS +   PQKYQR AR+QRESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGRQ
Sbjct: 64  PSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQ 123

Query: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQWELAHGLFD 188
           LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLR KQWELAHGLFD
Sbjct: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183

Query: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLC 248
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIELSRKLC
Sbjct: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243

Query: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTVSYS
Sbjct: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYS 303

Query: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368
           TLL+MFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW MRKM
Sbjct: 304 TLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363

Query: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423

Query: 429 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 488
           TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVA 483

Query: 489 YERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVF 548
           YE+AGLVAHAKRLLHEL+QPDNIPRKTAITILA+AGRIEEATWVFRQAFDAGELKDISVF
Sbjct: 484 YEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543

Query: 549 GCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQE 608
           GCMIDLFSRNKKH NVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD ADAVYMEMQE
Sbjct: 544 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQE 603

Query: 609 EGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 668
           +GC+FPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYER NRLN+
Sbjct: 604 KGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNN 663

Query: 669 ASRIMNRMNEMATSRS 682
           ASRIMNRMNE A SRS
Sbjct: 664 ASRIMNRMNETAISRS 679

[Close]
BLAST of Lag0027880 vs. ExPASy TrEMBL
Match: A0A1S3B8T9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487030 PE=4 SV=1)

HSP 1 Score: 1239.6 bits (3206), Expect = 0.0e+00
Identity = 634/676 (93.79%), Postives = 654/676 (96.75%), Query Frame = 0 

Query: 9   SSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKSKDVWRRKT 68
           SS+QLQST SFSSPIPLFLI T++ PKIR NKIK  PRT IPIFRAS+SS SKD+WRRKT
Sbjct: 4   SSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKT 63

Query: 69  PFEKSPS---PQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128
           P EKS +   PQKYQR AR+QRESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGRQ
Sbjct: 64  PSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQ 123

Query: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQWELAHGLFD 188
           LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLR KQWELAHGLFD
Sbjct: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183

Query: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLC 248
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIELSRKLC
Sbjct: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243

Query: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTVSYS
Sbjct: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYS 303

Query: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368
           TLL+MFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW MRKM
Sbjct: 304 TLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363

Query: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423

Query: 429 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 488
           TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVA 483

Query: 489 YERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVF 548
           YE+AGLVAHAKRLLHEL+QPDNIPRKTAITILA+AGRIEEATWVFRQAFDAGELKDISVF
Sbjct: 484 YEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543

Query: 549 GCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQE 608
           GCMIDLFSRNKKH NVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD ADAVYMEMQE
Sbjct: 544 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQE 603

Query: 609 EGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 668
           +GC+FPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYER NRLN+
Sbjct: 604 KGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNN 663

Query: 669 ASRIMNRMNEMATSRS 682
           ASRIMNRMNE A SRS
Sbjct: 664 ASRIMNRMNETAISRS 679

[Close]
BLAST of Lag0027880 vs. ExPASy TrEMBL
Match: A0A6J1F2M9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441589 PE=4 SV=1)

HSP 1 Score: 1228.4 bits (3177), Expect = 0.0e+00
Identity = 634/684 (92.69%), Postives = 655/684 (95.76%), Query Frame = 0 

Query: 1   MRFSSIQPSSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKS 60
           M  +SI PSSMQLQSTSSFSSP+ L LI T+N+ K+ L++ K  PR  I I RAS+SS S
Sbjct: 1   MVVASISPSSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60

Query: 61  KDVWRRKTPFEKS---PSPQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KD+WRRKT  EKS   P PQKY+R AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 61  KDIWRRKTSSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLR KQW
Sbjct: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKM+QDRV+GDLVLYSNL
Sbjct: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EEATWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNAD 600
           ELKDISVFGCMIDLFSRNKKH NVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD AD
Sbjct: 541 ELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIY 660
           AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVASIY
Sbjct: 601 AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIY 660

Query: 661 ERANRLNDASRIMNRMNEMATSRS 682
           ERANRLNDASRIMNRMNEM+ SRS
Sbjct: 661 ERANRLNDASRIMNRMNEMSISRS 684

[Close]
BLAST of Lag0027880 vs. ExPASy TrEMBL
Match: A0A6J1J8J4 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482255 PE=4 SV=1)

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 632/684 (92.40%), Postives = 654/684 (95.61%), Query Frame = 0 

Query: 1   MRFSSIQPSSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKS 60
           M  +SI PSSMQLQSTSSFSSP+ L L  T+N+ K+ L++ K  PR  I I RAS+SS S
Sbjct: 1   MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60

Query: 61  KDVWRRKTPFEKS---PSPQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KD+WRRKTP EKS   P PQKY+R AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 61  KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLR KQW
Sbjct: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNL
Sbjct: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EEATWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNAD 600
           ELKDISVFGCMIDLFSRNK+H NVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD AD
Sbjct: 541 ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIY 660
           AVYMEMQE+GCVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVA IY
Sbjct: 601 AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY 660

Query: 661 ERANRLNDASRIMNRMNEMATSRS 682
           ERANRLNDASRIMNRMNEM+ SRS
Sbjct: 661 ERANRLNDASRIMNRMNEMSISRS 684

[Close]
BLAST of Lag0027880 vs. ExPASy TrEMBL
Match: A0A6J1DYU7 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024318 PE=4 SV=1)

HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 629/684 (91.96%), Postives = 650/684 (95.03%), Query Frame = 0 

Query: 1   MRFSSIQPSSMQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKS 60
           MR SSI  SSMQL+STS FSS IPLFL+GT+N   IRLNKIK  P TPI I RASASSKS
Sbjct: 1   MRSSSISSSSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKS 60

Query: 61  KDVWRRKTP---FEKSPSPQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KDVWRR+TP      SP PQKYQR AR+QRE  HLDHSVDMDELL+SIGQTKNEQELYS+
Sbjct: 61  KDVWRRRTPSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSV 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQW 180
           LSPYKGRQLS+RFMVS+LSRE DWQRSLAILDW+NEEALYTPSVFAYNVV+RNVLR KQW
Sbjct: 121 LSPYKGRQLSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNL 240
           E+AHGLFDEMRQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+MEQDRV+GDLVLYSNL
Sbjct: 181 EIAHGLFDEMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV V
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSV+SEM EVNCPLDLTTCN+MIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRLLHEL+QPDNIPRKTAITILARAGRIEEATWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNAD 600
           ELKDIS+FGCMIDLFSRNKKH NVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD AD
Sbjct: 541 ELKDISIFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIY 660
           AVYMEMQEEGCVF DEVHFQML LYGARKDYKRL+SLFERLDSDPNINKKELHLVVASIY
Sbjct: 601 AVYMEMQEEGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIY 660

Query: 661 ERANRLNDASRIMNRMNEMATSRS 682
           ERANRLNDASRIM+RMNEMA SRS
Sbjct: 661 ERANRLNDASRIMSRMNEMAISRS 684

[Close]
BLAST of Lag0027880 vs. TAIR 10
Match: AT5G39980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1007.7 bits (2604), Expect = 4.5e-294
Identity = 517/670 (77.16%), Postives = 592/670 (88.36%), Query Frame = 0 

Query: 11  MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRTPIPIFRASASSKS-----KDVWR 70
           +++ S+SS S P+ L L        I  + I P  R    IF  SASS S     K VW 
Sbjct: 3   IEIASSSSLSLPL-LPLTRPHIYTSIPFSTI-PEARQRNLIFTVSASSSSESTQNKKVW- 62

Query: 71  RKTPFEKSPSPQKYQRPARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 130
           RK P + + S  +  R  R+ + S+ LDH+VDMDELLASI QT+NE+EL+S+LS YK RQ
Sbjct: 63  RKQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQ 122

Query: 131 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRDKQWELAHGLFD 190
           LS+RFMVS+LSRE+DWQRSLA+LDW++EEA YTPSVFAYNVVLRNVLR KQ+++AHGLFD
Sbjct: 123 LSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFD 182

Query: 191 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLC 250
           EMRQRALA DRYTYSTLIT FGKEGMFD+ALSWLQKMEQDRV+GDLVLYSNLIELSR+LC
Sbjct: 183 EMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC 242

Query: 251 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 310
           DYSKAISIFSRLKRSGITPD+VAYNSMINV+GKAKLFREAR L+KEM    V+P+TVSYS
Sbjct: 243 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 302

Query: 311 TLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 370
           TLLS++VEN KFLEALSVF+EM EVNC LDLTTCNIMIDVYGQLDMVKEADRLFWS+RKM
Sbjct: 303 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 362

Query: 371 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 430
            IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++EHEKA
Sbjct: 363 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 422

Query: 431 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 490
           TNLVQEMQ+RGIEPNAITYSTIISIWGKAGKL+RAA LFQKLRSSG EIDQVLYQTMIVA
Sbjct: 423 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 482

Query: 491 YERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVF 550
           YER GL+ HAKRLLHEL+ PDNIPR+TAITILA+AGR EEATWVFRQAF++GE+KDISVF
Sbjct: 483 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVF 542

Query: 551 GCMIDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQE 610
           GCMI+L+SRN+++ NV+EVFEKMR+ G+FP+SNVIA+VLNAYGK R+F+ AD VY EMQE
Sbjct: 543 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQE 602

Query: 611 EGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 670
           EGCVFPDEVHFQMLSLY ++KD++ +ESLF+RL+SDPN+N KELHLVVA++YERA++LND
Sbjct: 603 EGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLND 662

Query: 671 ASRIMNRMNE 676
           ASR+MNRM E
Sbjct: 663 ASRVMNRMRE 669

[Close]
BLAST of Lag0027880 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-53
Identity = 132/436 (30.28%), Postives = 231/436 (52.98%), Query Frame = 0 

Query: 157 YTPSVFAYNVVLRNVLRDKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 216
           Y P+   +N ++  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 217 SWLQKMEQDRVTGDLVLYSNLIELSRKLCDY---SKAISIFSRLKRSGITPDIVAYNSMI 276
           S L+KME+ ++  D+V+Y+ +I+    LC+Y   + A+++F+ +   GI P++V YNS+I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 300

Query: 277 NVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCP 336
                   + +A  LL +M    + P+ V++S L+  FV+  K +EA  ++ EM + +  
Sbjct: 301 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 337 LDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHL 396
            D+ T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 420

Query: 397 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGK 456
           FR M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K
Sbjct: 421 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 480

Query: 457 AGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELR----QPDNIP 516
            GKLE+A ++F+ L+ S  E D   Y  MI    +AG V     L   L     +P+ I 
Sbjct: 481 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 540

Query: 517 RKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHTNVVEVFEKMR 576
             T I+   R G  EEA  +FR+  + G L +   +  +I    R+       E+ ++MR
Sbjct: 541 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 600

Query: 577 SVGHFPNSNVIALVLN 586
           S G   +++ I++V+N
Sbjct: 601 SCGFVGDASTISMVIN 613

[Close]
BLAST of Lag0027880 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-52
Identity = 130/571 (22.77%), Postives = 266/571 (46.58%), Query Frame = 0 

Query: 94  HSVDMDELLASIGQTKNEQELYSILSPYKGRQLSMRFMVSILSR---ESDWQRSLAILDW 153
           +S D++ L+  +        +   L  +K + LS+     +        DWQRSL +  +
Sbjct: 72  YSYDVESLINKLSSLPPRGSIARCLDIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKY 131

Query: 154 INEEALYTPSVFAYNVVLRNVLRDKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEG 213
           +  +    P+   Y +++  + R+   +    +FDEM  + ++   ++Y+ LI  +G+ G
Sbjct: 132 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 191

Query: 214 MFDAALSWLQKMEQDRVTGDLVLYSNLIE-LSRKLCDYSKAISIFSRLKRSGITPDIVAY 273
            ++ +L  L +M+ ++++  ++ Y+ +I   +R   D+   + +F+ ++  GI PDIV Y
Sbjct: 192 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 251

Query: 274 NSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTE 333
           N++++      L  EA  + + M    +VPD  +YS L+  F +  +  +   +  EM  
Sbjct: 252 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 311

Query: 334 VNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGE 393
                D+T+ N++++ Y +   +KEA  +F  M+  G  PN  +Y+ +L ++G++  + +
Sbjct: 312 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 371

Query: 394 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIIS 453
              LF  M+    + +  TYN +I+++G+    ++   L  +M    IEP+  TY  II 
Sbjct: 372 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 431

Query: 454 IWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAK---RLLHELRQPD 513
             GK G  E A  + Q + ++        Y  +I A+ +A L   A      +HE+    
Sbjct: 432 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 491

Query: 514 NIPR-KTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHTNVVEVF 573
           +I    + +   AR G ++E+  +  +  D+G  ++   F   I+ + +  K    V+ +
Sbjct: 492 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 551

Query: 574 EKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEGCVFPDEVHFQMLSLYGAR 633
             M      P+   +  VL+ Y   R  D     + EM+    +     +  ML++YG  
Sbjct: 552 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 611

Query: 634 KDYKRLESLFERLDSDPNINKKELHLVVASI 657
           + +  +  L E + S+   N   +H V+  +
Sbjct: 612 ERWDDVNELLEEMLSNRVSN---IHQVIGQM 638

[Close]
BLAST of Lag0027880 vs. TAIR 10
Match: AT3G23020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-50
Identity = 146/611 (23.90%), Postives = 280/611 (45.83%), Query Frame = 0 

Query: 112 QELYSILSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNV 171
           +++   LSP+  R LS +    IL  +  W+R++ I +W   +  Y  +V  YN++LR +
Sbjct: 139 EDVEDALSPWAER-LSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRIL 198

Query: 172 LRDKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDL 231
            +  +W     L+DEM ++ +     TY TLI  + K G+   AL WL KM +  +  D 
Sbjct: 199 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 258

Query: 232 VLYSNLIELSRKLCDYSKAISIFSRLK------RSGITPDIVAYNSMINVFGKAKLFREA 291
           V    ++++ +K  ++ KA   F +         S +      YN+MI+ +GK+   +EA
Sbjct: 259 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEA 318

Query: 292 RFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDV 351
               K M    +VP TV+++T++ ++  N +  E  S+   M +++C  D  T NI+I +
Sbjct: 319 SETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISL 378

Query: 352 YGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQN 411
           + + + ++ A   F  M+  G++P+ VSY T+L  +    +  EA  L   M    +E +
Sbjct: 379 HTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEID 438

Query: 412 VVTYNTMIKIY------GKSLEHEKATNLVQEMQNRGIEPN------------------- 471
             T + + ++Y       KS    K  ++   M + G   N                   
Sbjct: 439 EYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFIC 498

Query: 472 --------AITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLV 531
                    I Y+ +I  +G +   E+A  LF+ + S G   D+  Y T++     A + 
Sbjct: 499 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 558

Query: 532 AHAKRLLHELRQ----PDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCM 591
              +  L ++R+     D IP    I+   + G++  A  V+++  +     D+ V+G +
Sbjct: 559 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 618

Query: 592 IDLFSRNKKHTNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQE--E 651
           I+ F+        +   E M+  G   NS +   ++  Y K+   D A+A+Y ++ +   
Sbjct: 619 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 678

Query: 652 GCVFPDEVHFQ-MLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 677
              +PD      M++LY  R   ++ E++F+ +      N+    +++  +Y++  R  +
Sbjct: 679 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLC-MYKKNGRFEE 738

[Close]
BLAST of Lag0027880 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 198.7 bits (504), Expect = 1.5e-50
Identity = 128/446 (28.70%), Postives = 229/446 (51.35%), Query Frame = 0 

Query: 144 SLAILDWINEEALYTPSVFAYNVVLRNVLRDKQWELAHGLFDEMRQRALAADRYTYSTLI 203
           ++A++D + E   Y P  F +  ++  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 204 TYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 263
               K G  D ALS L+KME+ ++  D+V+Y+ +I+   K      A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 264 PDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSV 323
           PD+  Y+S+I+       + +A  LL +M    + P+ V++S L+  FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 324 FSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGE 383
           + EM + +   D+ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 384 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAIT 443
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 444 YSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELR 503
           Y+ ++    K GKL +A ++F+ L+ S  E D   Y  MI    +AG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 504 ----QPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHT 563
                P+ I   T I+   R G  EEA  + ++  + G L +   +  +I    R+    
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 564 NVVEVFEKMRSVGHFPNSNVIALVLN 586
              E+ ++MRS G   +++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

The following BLAST results are available for this feature:
BLAST of Lag0027880 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443439.10.0e+0093.79PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic ... [more]
XP_023521621.10.0e+0093.10pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucur... [more]
XP_022934402.10.0e+0092.69pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita ... [more]
KAG6580983.10.0e+0092.54Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022983728.10.0e+0092.40pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita ... [more]
BLAST of Lag0027880 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLD86.4e-29377.16Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop... [more]
Q9LQ142.0e-5230.28Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
Q9S7Q23.7e-5122.77Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
Q9LS881.6e-4923.90Pentatricopeptide repeat-containing protein At3g23020 OS=Arabidopsis thaliana OX... [more]
Q9LQ162.1e-4928.70Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX... [more]
BLAST of Lag0027880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UGV70.0e+0093.79Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B8T90.0e+0093.79pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis ... [more]
A0A6J1F2M90.0e+0092.69pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit... [more]
A0A6J1J8J40.0e+0092.40pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit... [more]
A0A6J1DYU70.0e+0091.96pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Momordic... [more]
BLAST of Lag0027880 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39980.14.5e-29477.16Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62930.11.4e-5330.28Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74850.12.7e-5222.77plastid transcriptionally active 2 [more]
AT3G23020.11.1e-5023.90Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62910.11.5e-5028.70Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 372..405
e-value: 3.7E-6
score: 24.8
coord: 583..612
e-value: 7.0E-6
score: 23.9
coord: 302..335
e-value: 1.8E-5
score: 22.6
coord: 544..576
e-value: 2.2E-4
score: 19.2
coord: 267..301
e-value: 1.6E-7
score: 29.1
coord: 407..441
e-value: 3.3E-8
score: 31.2
coord: 338..371
e-value: 2.9E-7
score: 28.2
coord: 197..227
e-value: 4.4E-6
score: 24.5
coord: 442..475
e-value: 1.1E-4
score: 20.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 159..204
e-value: 6.9E-11
score: 42.2
coord: 405..448
e-value: 1.2E-14
score: 54.3
coord: 299..344
e-value: 4.1E-10
score: 39.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 219..278
e-value: 1.6E-9
score: 37.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 372..401
e-value: 2.2E-4
score: 21.2
coord: 544..572
e-value: 0.0052
score: 17.0
coord: 583..608
e-value: 0.0031
score: 17.6
coord: 477..503
e-value: 0.2
score: 12.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 370..404
score: 10.215989
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 440..474
score: 10.215989
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 160..194
score: 9.141782
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 541..575
score: 9.755614
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 335..369
score: 11.673842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 265..299
score: 11.301158
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 405..439
score: 12.298636
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 195..229
score: 9.898111
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 300..334
score: 10.303679
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 576..610
score: 8.944478
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 475..509
score: 8.801982
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 230..264
score: 9.229472
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 391..494
e-value: 3.6E-27
score: 96.9
coord: 109..242
e-value: 2.0E-23
score: 84.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 504..680
e-value: 2.1E-20
score: 75.3
coord: 243..390
e-value: 5.5E-39
score: 136.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..93
NoneNo IPR availablePANTHERPTHR47447:SF7PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTICcoord: 15..677
NoneNo IPR availablePANTHERPTHR47447OS03G0856100 PROTEINcoord: 15..677

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0027880.1Lag0027880.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0031425 chloroplast RNA processing
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding