Lag0027863 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCTCTTCTTCTAGTACCTCCTCCACCGGAAATGAAAACTTACCTGAGTTGCCTTCTTCCTCTACAACTGTCACTATCCCTATGTCATCATCCACTTCCACTATCTCCATTCCTCTATCGACACCCGTGAACCCATCTCAGCGGTTAAATGTGAATCCATCCCAAAGTCAGAATGTGAATTTCTCCCCAAACTCTAATGTCTCCAATTTTTCTAATCGACCTTTGAACCCTAATCAGCCTTCTTTCTACTCCAACATTCAGCAGCAACCTTTCTCCTCATCCTTTCCCTTTCCTCATACGTCAACACCAACTGGCTTCCAATATCCTCCTCCCTCCTTTTTCGCTTTACCTTTCTTTCCCACTTACAATGTCGAAAACCAATTTTTCCCTCTATTTAGCAACCTTTGCCGCCATATCCAATTCTTACTCCGCCGCTAAACATCAAGCTCTTGAACTTCAACTACTTGCTTTGGAAGAACCAGCTTCTTAATCGTATCATTGCAATTGATATGGAGAGTTTCATTAACGACACTCCTTCACCCCCAAAGTTCTTGGACGCTATTGAAACCCAGGTAAATCCCTTGTTTCCTATATGGCAAAAATATAATTGCACTTTGATGAGCTAGATTTATTTGTCTCTGAATGAAGATAAGTTAGGAGAAATAATTGGTTGCTCTACTGCTATTGATATTTTGGAACACCTTCGAATTGTCTATGAATCTTCTTCCACGACTCGTAGTATGGGTCTTCACTCTTAGCTTCAAAAGATTAAGAAGTATGGTTTATCTGTAACCCAATACCTTGCCAAAATAAAGGATATTACAGATAAATTTTCGGCCATTGGGGAGCCTCTGTCTTATCGGGACCATCTAGGATATATCCTTGAAGGATTAGGAACTGAGTACAATCCATTTGTTACTTCTATTCAAAGCCGAAGTGATCGTCCTTCTCTAGCTAATGTTTGAAGTCTTTTCTTGGCTTACGAGGCTCGTCTTGAAAAACAATGTTTTGTGGATCAACTGAACTTGGTGCAAGCCAACCTTGCCATCATCTCCACTTCTTCTGGTAAAAAACGTTTCAACAAACAATCTCCTAACCAAAAATAAAATACCTTCCCTCGACCCTCATCTCCCTTTCCCTTCCCTCCGAATTTTCCCACCCCTAGTCTTGGAGTTTTAGGTCAACCACAGTCTTCCCCCCGTCCTTCTAAATGGCCTCAATCACAAAATTTCAATCACCCTCAATGTCAGATATGTGGTAAGCTCGACCACACCGCCCTTGTTTGCTATAATCGCCATAACCCTCTATATCATGCTCCCAACACTACATCTCCTTCTTTGCAAGCCTATTTGAACCAACTTCAATCTCTTCCTCGGTCTTCCACTACCACATCTTCTGATAACCTACCTGCACTTTAG ATGGTCTCTTCTTCTAGTACCTCCTCCACCGGAAATGAAAACTTACCTGAGTTGCCTTCTTCCTCTACAACTGTCACTATCCCTATGTCATCATCCACTTCCACTATCTCCATTCCTCTATCGACACCCGTGAACCCATCTCAGCGGTTAAATGTGAATCCATCCCAAAGTCAGAATCAACCTTTGCCGCCATATCCAATTCTTACTCCGCCGCTAAACATCAAGCTCTTGAACTTCAACTACTTGCTTTGGAAGAACCAGCTTCTTAATCGTATCATTGCAATTGATATGGAGAGTTTCATTAACGACACTCCTTCACCCCCAAAGTTCTTGGACGCTATTGAAACCCAGGCTCGTCTTGAAAAACAATGTTTTGTGGATCAACTGAACTTGGTGCAAGCCAACCTTGCCATCATCTCCACTTCTTCTGGTCAACCACAGTCTTCCCCCCGTCCTTCTAAATGGCCTCAATCACAAAATTTCAATCACCCTCAATGTCAGATATGTGGTAAGCTCGACCACACCGCCCTTGTTTGCTATAATCGCCATAACCCTCTATATCATGCTCCCAACACTACATCTCCTTCTTTGCAAGCCTATTTGAACCAACTTCAATCTCTTCCTCGGTCTTCCACTACCACATCTTCTGATAACCTACCTGCACTTTAG ATGGTCTCTTCTTCTAGTACCTCCTCCACCGGAAATGAAAACTTACCTGAGTTGCCTTCTTCCTCTACAACTGTCACTATCCCTATGTCATCATCCACTTCCACTATCTCCATTCCTCTATCGACACCCGTGAACCCATCTCAGCGGTTAAATGTGAATCCATCCCAAAGTCAGAATCAACCTTTGCCGCCATATCCAATTCTTACTCCGCCGCTAAACATCAAGCTCTTGAACTTCAACTACTTGCTTTGGAAGAACCAGCTTCTTAATCGTATCATTGCAATTGATATGGAGAGTTTCATTAACGACACTCCTTCACCCCCAAAGTTCTTGGACGCTATTGAAACCCAGGCTCGTCTTGAAAAACAATGTTTTGTGGATCAACTGAACTTGGTGCAAGCCAACCTTGCCATCATCTCCACTTCTTCTGGTCAACCACAGTCTTCCCCCCGTCCTTCTAAATGGCCTCAATCACAAAATTTCAATCACCCTCAATGTCAGATATGTGGTAAGCTCGACCACACCGCCCTTGTTTGCTATAATCGCCATAACCCTCTATATCATGCTCCCAACACTACATCTCCTTCTTTGCAAGCCTATTTGAACCAACTTCAATCTCTTCCTCGGTCTTCCACTACCACATCTTCTGATAACCTACCTGCACTTTAG MVSSSSTSSTGNENLPELPSSSTTVTIPMSSSTSTISIPLSTPVNPSQRLNVNPSQSQNQPLPPYPILTPPLNIKLLNFNYLLWKNQLLNRIIAIDMESFINDTPSPPKFLDAIETQARLEKQCFVDQLNLVQANLAIISTSSGQPQSSPRPSKWPQSQNFNHPQCQICGKLDHTALVCYNRHNPLYHAPNTTSPSLQAYLNQLQSLPRSSTTTSSDNLPAL Homology
BLAST of Lag0027863 vs. NCBI nr
Match: CAN73380.1 (hypothetical protein VITISV_032547 [Vitis vinifera]) HSP 1 Score: 62.8 bits (151), Expect = 4.4e-06 Identity = 58/203 (28.57%), Postives = 74/203 (36.45%), Query Frame = 0
BLAST of Lag0027863 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia]) HSP 1 Score: 61.2 bits (147), Expect = 1.3e-05 Identity = 42/122 (34.43%), Postives = 55/122 (45.08%), Query Frame = 0
BLAST of Lag0027863 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia]) HSP 1 Score: 55.5 bits (132), Expect = 7.0e-04 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
HSP 2 Score: 60.1 bits (144), Expect = 2.8e-05 Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = 0
BLAST of Lag0027863 vs. NCBI nr
Match: RVX04814.1 (hypothetical protein CK203_024917 [Vitis vinifera]) HSP 1 Score: 60.1 bits (144), Expect = 2.8e-05 Identity = 39/83 (46.99%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of Lag0027863 vs. NCBI nr
Match: RVW56403.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]) HSP 1 Score: 58.9 bits (141), Expect = 6.3e-05 Identity = 42/90 (46.67%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of Lag0027863 vs. ExPASy TrEMBL
Match: A5AG90 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032547 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.1e-06 Identity = 58/203 (28.57%), Postives = 74/203 (36.45%), Query Frame = 0
BLAST of Lag0027863 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 6.2e-06 Identity = 42/122 (34.43%), Postives = 55/122 (45.08%), Query Frame = 0
BLAST of Lag0027863 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.4e-04 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
HSP 2 Score: 60.1 bits (144), Expect = 1.4e-05 Identity = 39/83 (46.99%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of Lag0027863 vs. ExPASy TrEMBL
Match: A0A7J0EGI5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.4e-05 Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = 0
BLAST of Lag0027863 vs. ExPASy TrEMBL
Match: A0A438F8X3 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_2675 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.1e-05 Identity = 42/90 (46.67%), Postives = 53/90 (58.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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