Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGCTAAACAAGCATGGCGTGTGGTGGTTAATCCAAACTTAACGCTCTCTAAGATTCTAAGGGGGAGGTATTTCCCTACGTTGTCTGTTTTTTATGCATCAGTCAAATCTTCCTCCTCTTATTTCTGGAAGGGTTTTGTGTTGGGGCTTGGATTTGCTGAAGGGGGTATTCGACGGAATCGAGCGAATGGTCAGTCGATTAAAATCTTTAAAGATCCTTGGATTCCTCATCCTGTTACCTTTAAGGTGATGATGATCGAAGGCTAGGCTAATGAGGATATGAGAGTGACAGAATTTATCACTTCATCAAACCAGTGGGGTGTCTCCAAGCTTAACCAATTTCTATGCGATGAGGATGTTCGAGTGATTTCTCACTTACCAATTAACAGGTCAGCTCTGGATACGTGTATTTGGCACTATGTCAGGAAAGGGAAATATATTGTCAAGATTGGGTATAAGTATAGCATGTTACAGCAATAGGCAACTTCTTCTTCGAATCTTGAAACGAAAAGTAACTGGTGGAAGAAATTATGGAAGTTGAGGATTCCAAACAAGGTCAAACACTTCGTCTGGAACTCATTCCATAATTAGATTTGACAATGGCTAACCTGTGGCGTCACCATGTCCCAGTGGATGGTACTTGTACCAGTTGAAAAGAGGGCCTGGAAACTACTGATCATGCTCTATTTCAGTATAAGCGTGTGATGAAGATATGGGAAGTTCTCGTTCTAGGTGAAATCAAGACCATTCAAAGACATATGGATATATAGGATCGTTGGCTTTATCTCAGTAGTTGCTCTGAGCCCGTTTTGGATCTAATTTATATTGGTGCCTGGGCAATTTGGAATGATAGAAATTATGCCCTCCATAACCGCCTTGTTCCCAGCATCATTGATAGGTGTGTATGGATTTATAGGTACCTTGAAGACTTTAGAAAGATTAATGAGGTTAGGGCTTCTGTGTCATCATCTAGGGTCGACTTACATGTATTAGTCGACGAAGGCGAGGAAACCTTTATGCATACTGATGCGGCTTTTAATGAACCCAATAAGAAGTCAGAAATTGGGGTAGTGCTTCGTGACAAACAAGGTGATTTAAAGGCAGTTCTGTCTTCACCATCCCAAGTTTGTATCTCCCATCTAGGTGCTGAAGTTGTTGCTGTACTGGAGGGAATTCGATCCGCTATTAGTATGGGTGTCGAAAGCATTTTAGTGATGTGCGACTCTCTTTCATTGGTCAAGGCTCTTCAGGGAACGAACCATTGTGATTCGGGTATTTCATCAGTTTTGTGGGATACAAAAGGTCTTCAGACTTCTTTTCGTAGGATAACTTTTTTATCATGTAAACCGTTAATTTAATAAGTTTGCCCACGAATTGCCCTAGGTGGGCCAATATTCTACTAGGAAGGAGTGGAAGTCACATTATCCTGAGTGGATCACTCGGATGATGTGTCAGGAGCGTTCTCTTTTTGTATCCCCTAG
mRNA sequence
ATGTTTGCTAAACAAGCATGGCGTGTGGTGGTTAATCCAAACTTAACGCTCTCTAAGATTCTAAGGGGGAGGTATTTCCCTACGTTGTCTGTTTTTTATGCATCAGTCAAATCTTCCTCCTCTTATTTCTGGAAGGGTTTTGTGTTGGGGCTTGGATTTGCTGAAGGGGGTATTCGACGGAATCGAGCGAATGGTCAGTCGATTAAAATCTTTAAAGATCCTTGGATTCCTCATCCTGTTACCTTTAAGTGGGGTGTCTCCAAGCTTAACCAATTTCTATGCGATGAGGATGTTCGAGTGATTTCTCACTTACCAATTAACAGTAGTTGCTCTGAGCCCGTTTTGGATCTAATTTATATTGGTGCCTGGGCAATTTGGAATGATAGAAATTATGCCCTCCATAACCGCCTTGTTCCCAGCATCATTGATAGGTGTGTATGGATTTATAGGTACCTTGAAGACTTTAGAAAGATTAATGAGGTTAGGGCTTCTGTGTCATCATCTAGGGTCGACTTACATGTATTAGTCGACGAAGGCGAGGAAACCTTTATGCATACTGATGCGGCTTTTAATGAACCCAATAAGAAGTCAGAAATTGGGGTAGTGCTTCGTGACAAACAAGGTGATTTAAAGGCAGTTCTGTCTTCACCATCCCAAGTTTGTATCTCCCATCTAGGTGCTGAAGTTGTTGCTGTACTGGAGGGAATTCGATCCGCTATTAGTATGGGTGTCGAAAGCATTTTAGTGATGTGCGACTCTCTTTCATTGGTCAAGGCTCTTCAGGGAACGAACCATTGTGATTCGGGTATTTCATCAGTTTTGTGGGATACAAAAGGAGCGTTCTCTTTTTGTATCCCCTAG
Coding sequence (CDS)
ATGTTTGCTAAACAAGCATGGCGTGTGGTGGTTAATCCAAACTTAACGCTCTCTAAGATTCTAAGGGGGAGGTATTTCCCTACGTTGTCTGTTTTTTATGCATCAGTCAAATCTTCCTCCTCTTATTTCTGGAAGGGTTTTGTGTTGGGGCTTGGATTTGCTGAAGGGGGTATTCGACGGAATCGAGCGAATGGTCAGTCGATTAAAATCTTTAAAGATCCTTGGATTCCTCATCCTGTTACCTTTAAGTGGGGTGTCTCCAAGCTTAACCAATTTCTATGCGATGAGGATGTTCGAGTGATTTCTCACTTACCAATTAACAGTAGTTGCTCTGAGCCCGTTTTGGATCTAATTTATATTGGTGCCTGGGCAATTTGGAATGATAGAAATTATGCCCTCCATAACCGCCTTGTTCCCAGCATCATTGATAGGTGTGTATGGATTTATAGGTACCTTGAAGACTTTAGAAAGATTAATGAGGTTAGGGCTTCTGTGTCATCATCTAGGGTCGACTTACATGTATTAGTCGACGAAGGCGAGGAAACCTTTATGCATACTGATGCGGCTTTTAATGAACCCAATAAGAAGTCAGAAATTGGGGTAGTGCTTCGTGACAAACAAGGTGATTTAAAGGCAGTTCTGTCTTCACCATCCCAAGTTTGTATCTCCCATCTAGGTGCTGAAGTTGTTGCTGTACTGGAGGGAATTCGATCCGCTATTAGTATGGGTGTCGAAAGCATTTTAGTGATGTGCGACTCTCTTTCATTGGTCAAGGCTCTTCAGGGAACGAACCATTGTGATTCGGGTATTTCATCAGTTTTGTGGGATACAAAAGGAGCGTTCTCTTTTTGTATCCCCTAG
Protein sequence
MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRRNRANGQSIKIFKDPWIPHPVTFKWGVSKLNQFLCDEDVRVISHLPINSSCSEPVLDLIYIGAWAIWNDRNYALHNRLVPSIIDRCVWIYRYLEDFRKINEVRASVSSSRVDLHVLVDEGEETFMHTDAAFNEPNKKSEIGVVLRDKQGDLKAVLSSPSQVCISHLGAEVVAVLEGIRSAISMGVESILVMCDSLSLVKALQGTNHCDSGISSVLWDTKGAFSFCIP
Homology
BLAST of Lag0027730 vs. NCBI nr
Match:
XP_030939737.1 (uncharacterized protein LOC115964598 [Quercus lobata])
HSP 1 Score: 107.5 bits (267), Expect = 2.0e-19
Identity = 81/310 (26.13%), Postives = 131/310 (42.26%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
+ AKQ WR+ + ++ + +YFP +AS+ + SY W+ + + G+R
Sbjct: 237 LLAKQGWRLQTQHESLVYRVYKAKYFPNTGFIHASLGTHPSYTWRSLMAAQHLVKKGVRW 296
Query: 61 NRANGQSIKIFKDPWIPHPVTFKWGVSKLNQFLCDEDVR--------------------- 120
N NG SI ++ D W+P P TFK +L EDVR
Sbjct: 297 NVGNGDSIWVWSDKWLPSPSTFKITSPRLAM----EDVRSSNRGSSSDPSKTRRFWKRLW 356
Query: 121 ---VISHLPINSSCSEPVLDLIYIGAWAIWNDRNYALHNRLVPSIIDRCVWIYRYLEDFR 180
V + + S E L+ AW +W +RN H S +D W +YL++F+
Sbjct: 357 RLQVPHKMLMMDSHEEKDAKLVVTIAWMLWFNRNEVRHGGRKKSAVDLFQWSRQYLQEFQ 416
Query: 181 KINEVRASVSSSRVDLHVLVDEGEETFMHTDAAFNEPNKKSEIGVVLRDKQGDLKAVLSS 240
++N+V S V + ++ D K + +GV++RD G + A LS
Sbjct: 417 EVNQVVPSTGMPWV-VGWSPPPLTRYKVNVDDTVFTAQKCAGVGVLIRDSYGQVIAALSR 476
Query: 241 PSQVCISHLGAEVVAVLEGIRSAISMGVESILVMCDSLSLVKALQGTNHCDSGISSVLWD 287
+ L E A G+ A +GV ++ DSL + AL G++ S I+ V+
Sbjct: 477 KLNAPLGALEVEAKAFEVGLEFARDVGVHDFVLEGDSLVVYNALCGSSIPPSMIAPVI-- 536
BLAST of Lag0027730 vs. NCBI nr
Match:
XP_031099874.1 (uncharacterized protein LOC116004082 [Ipomoea triloba])
HSP 1 Score: 100.9 bits (250), Expect = 1.9e-17
Identity = 81/294 (27.55%), Postives = 128/294 (43.54%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
M KQ WR + NP+ +++I + RYFP S ASV SY W+ + G+RR
Sbjct: 834 MLGKQVWRFLTNPHSLVARIYKARYFPKSSFIDASVGGCPSYCWRSIMAAHDLVCSGVRR 893
Query: 61 NRANGQSIKIFKDPWIP------------------------HPVTFKWGVSKLNQFLCDE 120
NG+S I+ PW+P P T W + L+
Sbjct: 894 RIGNGKSTLIWGHPWLPDDPGPMVQTVMPQTLAGAAVSGLIDPTTNTWDQTILHDIFTLN 953
Query: 121 DVRVISHLPINSSCSEPVLDLIYIGAWAIWNDRNYALHNRLVPSIIDRCVW--IYRYLED 180
DVR I +P ++ + ++Y IW RN A+ + +P+ R VW +
Sbjct: 954 DVRRILSIPFLAAVA-----VLYF----IWTARNKAVWDACLPT--PRRVWQMATSAADA 1013
Query: 181 FRKINEVRASVSS-----SRVDLHVLVDEGEETFMHT---DAAFNEPNKKSEIGVVLRDK 240
+R++++ S+ + L V +G+ +H DA F ++K+ +GVVL
Sbjct: 1014 WRQVHQHMPGPSTPDGVEAGATLSAAVHQGD--MLHRCFFDAGFLPKSRKASVGVVLLSP 1073
Query: 241 QGDLKAVLSSPSQVCISHLGAEVVAVLEGIRSAISMGVESILVMCDSLSLVKAL 261
+GD A +SP Q C+S L AE VA E + G+ S++ D L + L
Sbjct: 1074 EGDFVAAFNSPMQDCLSPLMAESVACKEVLSWIKDRGLGSVVHFTDCSGLQQLL 1114
BLAST of Lag0027730 vs. NCBI nr
Match:
XP_024178198.1 (uncharacterized protein LOC112184155 [Rosa chinensis])
HSP 1 Score: 100.9 bits (250), Expect = 1.9e-17
Identity = 71/305 (23.28%), Postives = 127/305 (41.64%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
+ AKQ WR++ P+ L+++L+ RYFP A + +S+ W+ + G G+R
Sbjct: 157 LLAKQGWRLICRPDSLLAQVLKARYFPQTDFMQAELHKGASFTWRSILKGRDLLRKGLRF 216
Query: 61 NRANGQSIKIFKDPWIPHPVTFK------WGVS--KLNQFLCDEDVRVISHLPIN----- 120
NG++I ++ DPW+P P F+ G K+ F+ E H +N
Sbjct: 217 QVGNGENISVWNDPWVPLPYRFRPFSLPMQGTEEFKVADFIDSEAGAFWLHGLLNLQPGK 276
Query: 121 --------------SSCSEPVLDLIYIGAWAIWNDRNYALHNRLVPSIIDRCVWIYRYLE 180
+ L+ + W +W +RN + +II+ W +L+
Sbjct: 277 HPTTLLDIWFWDMIEALDGEKLEYFLMALWVVWMERNNMVWKGSYFNIINMHAWATSFLD 336
Query: 181 DFRKINEVRASVSSSRVDLHVLVDEGEETFMHTDAAFNEPNKKSEIGVVLRDKQGDLKAV 240
D++ +++ R + R + ++ D +F +GVV+R+ +G A
Sbjct: 337 DYKNLHK-RQGHKARRTPIKWSRPPRGRLKINIDGSFCADTGSGGVGVVVRNYEGTCMAT 396
Query: 241 LSSPSQVCISHLGAEVVAVLEGIRSAISMGVESILVMCDSLSLVKALQGTNHCDSGISSV 279
+ Q S + E A+ G+ AI + I V D ++LV AL S I +
Sbjct: 397 FARTVQYAQSAIHMEAEALRAGLLIAIHQDWKEIEVESDCVNLVNALHVDGDDLSDIGRI 456
BLAST of Lag0027730 vs. NCBI nr
Match:
XP_042973059.1 (uncharacterized protein LOC122304861 [Carya illinoinensis])
HSP 1 Score: 100.1 bits (248), Expect = 3.2e-17
Identity = 79/330 (23.94%), Postives = 138/330 (41.82%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
+ AKQ WRV++NP + +L+ +YF + +A++ S+ WK L + G+
Sbjct: 22 LLAKQCWRVLMNPQSLAAVLLKDKYFRNTDLLHATLGFKPSFMWKSLWDSLSLLKEGLVW 81
Query: 61 NRANGQSIKIFKDPWIPHPVTFK------------------------WGVSKLNQFLCDE 120
NG+SIKI+ D W+P VTFK W + Q E
Sbjct: 82 RVGNGKSIKIWGDRWVPKAVTFKIQSPIQILNAEARVEELLSGENGGWNEGLIKQVFDKE 141
Query: 121 DVRVISHLPINSS----------------------CSEPVLDLIYIGAWAIWNDRN-YAL 180
+ ++ +LPI+ S E ++LI + IW RN +
Sbjct: 142 EAAIVCNLPISFSKLPDKQIWAFSKNGIYNVKSAYHVEDQMELIAVVLRRIWFRRNGWVF 201
Query: 181 HNRL-----VPSIIDRCVWIYRYLEDFRKINEVRASVSSSRVDLHVLVDEGEETFMHTDA 240
NR V S C+ Y+ ++ ++ +++ R LH EG+ ++ DA
Sbjct: 202 ENRFEGPNDVFSQAANCLSEYQQAQETQQAQPKQSNSQCGRA-LHWKPPEGDTVKVNWDA 261
Query: 241 AFNEPNKKSEIGVVLRDKQGDLKAVLSSPSQVCISHLGAEVVAVLEGIRSAISMGVESIL 279
A ++K +GVV+RD+ GD+ A L S + + AEV A+ ++ + +
Sbjct: 262 ALKSDDRKCGMGVVIRDRCGDVLASLCSCRWNVSNPVVAEVHALWRAMKLCEELKFSKVQ 321
BLAST of Lag0027730 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 100.1 bits (248), Expect = 3.2e-17
Identity = 49/130 (37.69%), Postives = 68/130 (52.31%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
+ AK WR + +PNL +SK+L+ +YF S+ AS S SSYFWKGF+ G G+R
Sbjct: 958 LVAKHVWRFLQHPNLLVSKVLKHKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRL 1017
Query: 61 NRANGQSIKIFKDPWIPHPVTFK----------------------WGVSKLNQFLCDEDV 109
NG +IK F DPW+P P TFK W V+ ++ C+ED
Sbjct: 1018 RVGNGSTIKAFSDPWLPRPTTFKPLRFNNGALDTTVASFITADGNWDVTSISHSFCNEDR 1077
BLAST of Lag0027730 vs. ExPASy Swiss-Prot
Match:
P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 8.2e-08
Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
+ AKQ++R++ P+ LS++LR RYFP S+ SV + SY W+ + G G+ R
Sbjct: 69 LLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLR 128
Query: 61 NRANGQSIKIFKDPWI 77
+G K++ D WI
Sbjct: 129 TIGDGIHTKVWLDRWI 144
BLAST of Lag0027730 vs. ExPASy TrEMBL
Match:
A0A803P4P2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 4.3e-20
Identity = 85/294 (28.91%), Postives = 126/294 (42.86%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
M AKQAWRV+ NPN L+ IL+ ++F + A + S S+ W + G G+
Sbjct: 1227 MIAKQAWRVLSNPNSLLAAILKAKHFKHTNFLEAKLGHSPSFTWSSLLWGRDLLNQGLMW 1286
Query: 61 NRANGQSIKIFKDPWIPHPVTFK------WGVSKLNQFLCDEDVRVISHLPI--NSSCSE 120
NG SI+ ++ W+P + W S L F + I I S S+
Sbjct: 1287 KVGNGCSIRTLENFWVPDSRFLRIGAIKIWKASPLKHFYANHRHVDIKEFLIAGYSHLSK 1346
Query: 121 PVLDLIYIGAWAIWNDRNYALHNRLVPSIIDRCVWIYRYLEDFRKINEVRASVSSSRV-- 180
L L+ WAIWN RN L S +D WI YL D+ +SSS +
Sbjct: 1347 EDLTLLLATVWAIWNFRNKKLFANCNMSSVDVVEWINSYLSDYNAAQVGMKKLSSSPILQ 1406
Query: 181 --DLHVLVDEGEETFMHTDAAFNEPNKKSEIGVVLRDKQGDLKAVLSSPSQVCISHLGAE 240
+ V+ G ++TDAA K G V+ D +G + A LS P+ L AE
Sbjct: 1407 DHEQPKQVNPGYYQ-LNTDAALCSSQGKLGFGAVISDWRGRIVAGLSIPAAGDFVPLMAE 1466
Query: 241 VVAVLEGIRSAISMGVESILVMCDSLSLVKALQGTNHCDSGISSVLWDTKGAFS 283
+A+ E + + + ++ DS LV + G S +S V+ D + S
Sbjct: 1467 ALALRESLNWCYLIRIPIAVIKTDSKLLVDRIHGRKRDLSALSDVVEDISNSLS 1519
BLAST of Lag0027730 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 1.5e-17
Identity = 49/130 (37.69%), Postives = 68/130 (52.31%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
+ AK WR + +PNL +SK+L+ +YF S+ AS S SSYFWKGF+ G G+R
Sbjct: 958 LVAKHVWRFLQHPNLLVSKVLKHKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRL 1017
Query: 61 NRANGQSIKIFKDPWIPHPVTFK----------------------WGVSKLNQFLCDEDV 109
NG +IK F DPW+P P TFK W V+ ++ C+ED
Sbjct: 1018 RVGNGSTIKAFSDPWLPRPTTFKPLRFNNGALDTTVASFITADGNWDVTSISHSFCNEDR 1077
BLAST of Lag0027730 vs. ExPASy TrEMBL
Match:
A0A803P5U5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 5.9e-17
Identity = 81/342 (23.68%), Postives = 135/342 (39.47%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
+ AKQAWR+V NPN L K+L+ +YFP S ASV S S W+G G G+R
Sbjct: 259 LLAKQAWRLVENPNSLLRKLLKSKYFPHNSFLQASVGHSPSLTWQGIRWGRELLIQGLRW 318
Query: 61 NRANGQSIKIFKDPWIPHPVTF---------------------KWGVSKLNQFLCDEDVR 120
+ G+SI+ DPWI TF +W +S L Q+ DV
Sbjct: 319 KISEGRSIRSGFDPWIHGHTTFTPIQYSGPRNGVVANLITDEKQWNLSLLQQYFSPLDVE 378
Query: 121 VISHLP----------------------------------INSSCSEPVLDLIYIGAWAI 180
I +P ++S ++ ++ ++ WAI
Sbjct: 379 KILTMPLSYFPTRDKLIWHHHSFGKFSVDASMKNGDYLQHLSSIYNKAEMEQLFCTLWAI 438
Query: 181 WNDRNYALHNRLVPSIIDRCVWIYRYLEDFRKINEVRAS---VSSSRVDLHVLVDEGEET 240
W +RN +H + +D ++ +L++++ S V +S HV T
Sbjct: 439 WTERNKVVHGKNARCAVDLALYSMVFLQNYKNAQVKTTSAVNVEASGSSHHV----SPPT 498
Query: 241 FMHTDAAFNEPNKK-SEIGVVLRDKQGDLKAVLSSPSQVCISHLGAEVVAVLEGIRSAIS 284
H ++ + + +G VLRD G +KA LS P E ++ + A+
Sbjct: 499 AAHVPWCPSDASTSITGVGAVLRDANGQVKAALSMPILRDFKSHEMEAKSLFHSLNWALQ 558
BLAST of Lag0027730 vs. ExPASy TrEMBL
Match:
A0A803PZ52 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 95.1 bits (235), Expect = 5.0e-16
Identity = 83/286 (29.02%), Postives = 123/286 (43.01%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
M AKQAWRV+ NPN TL+ IL+ +YF + A + S S+ W + G
Sbjct: 315 MIAKQAWRVLSNPNSTLAAILKAKYFKHTGFYEARLGHSPSFTWSSLLWGRDLLSQVTHA 374
Query: 61 NRANGQSIKIFKDPWIPHPVTFKWGVSKLNQFLCDEDVRVISHLPINSSCSEPVLDLIYI 120
+ KI+K + H V + +FL + SHL ++ L L+
Sbjct: 375 LLDCSSAAKIWKASPLKHFYVTHRHVD-IKEFL----ISGYSHL------NKEDLTLLLT 434
Query: 121 GAWAIWNDRNYALHNRLVPSIIDRCVWIYRYLEDFRKINEVRASVSSSRVDLHVLVDEGE 180
WAIWN RN L L S D WI YL D+ +S S++ LHV + +
Sbjct: 435 TVWAIWNLRNKKLFANLNMSSADVIDWINSYLSDYNAAQLNMRKLSPSQI-LHVHGQQKQ 494
Query: 181 ET----FMHTDAAFNEPNKKSEIGVVLRDKQGDLKAVLSSPSQVCISHLGAEVVAVLEGI 240
++TDAA K G V+ D G + A LS PS + L AE +A+ +
Sbjct: 495 VNPGYYQLNTDAALCSSQGKLGFGAVINDWHGRIVAGLSIPSAGDLFPLMAEALALRASL 554
Query: 241 RSAISMGVESILVMCDSLSLVKALQGTNHCDSGISSVLWDTKGAFS 283
+ + ++ DS LV + G S +S V+ D + + S
Sbjct: 555 NWCYHIRILIAVIETDSKLLVDRIYGRKRDLSVLSDVVEDIRSSLS 588
BLAST of Lag0027730 vs. ExPASy TrEMBL
Match:
A0A803NGQ8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 6.5e-16
Identity = 80/314 (25.48%), Postives = 129/314 (41.08%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
+ AKQAWR++ NP+ ++++L+ +YF AS SY W + G G+
Sbjct: 1338 LLAKQAWRILTNPHSLIARLLKAKYFKHNDFLSASKGHCPSYTWSSLLWGRDLLSSGLIS 1397
Query: 61 NRANGQSIKIFKDPWIP--HPVTFK-------------------WGVSKLNQFLCDEDVR 120
NG++ + WIP +T+K W V KLN + + V+
Sbjct: 1398 KIGNGETTDTLRHYWIPGFKNITYKTHVPPPNPTVSFFISDSGSWDVHKLNTYFSQDIVK 1457
Query: 121 VISHLPINSS-------CSEP------VLDLIYIG---------------AWAIWNDRNY 180
I +PI+ S S P + D + G W+IWN RN
Sbjct: 1458 AILTIPIDISQPDSLIWSSHPSGNLTDIKDFLLTGFEILPKDQLSLCVALLWSIWNKRNQ 1517
Query: 181 ALHNRLVPSIIDRCVWIYRYLEDFRKINEVRAS---VSSSRVDLHVLVDEGEETFMHTDA 240
L P + D + YL+++ + A+ + + L G T +++DA
Sbjct: 1518 TLFQSKSPPLHDIEDSVVDYLKEYSNSQQHSAASIPIPPATGTQPPLPPAGMYT-LYSDA 1577
Query: 241 AFNEPNKKSEIGVVLRDKQGDLKAVLSSPSQVCISHLGAEVVAVLEGIR--SAISMGVES 261
A + P G ++D G + A LSSP +S AE A+L+ I+ S + + + S
Sbjct: 1578 AISTPRSTMGFGAAIQDSTGQIIAALSSPHTGALSPTLAEAYALLQAIQWCSLVHLPLHS 1637
BLAST of Lag0027730 vs. TAIR 10
Match:
ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 59.3 bits (142), Expect = 5.8e-09
Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 0
Query: 1 MFAKQAWRVVVNPNLTLSKILRGRYFPTLSVFYASVKSSSSYFWKGFVLGLGFAEGGIRR 60
+ AKQ++R++ P+ LS++LR RYFP S+ SV + SY W+ + G G+ R
Sbjct: 69 LLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLR 128
Query: 61 NRANGQSIKIFKDPWI 77
+G K++ D WI
Sbjct: 129 TIGDGIHTKVWLDRWI 144
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P93295 | 8.2e-08 | 35.53 | Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A803P4P2 | 4.3e-20 | 28.91 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6J1DX30 | 1.5e-17 | 37.69 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A803P5U5 | 5.9e-17 | 23.68 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PZ52 | 5.0e-16 | 29.02 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803NGQ8 | 6.5e-16 | 25.48 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
ATMG00310.1 | 5.8e-09 | 35.53 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |